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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5189 cluster # 5189       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5189#0 length = 767 sequences # 3  

consensusID : consensus_5189#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 767
fasta sequence
                              [TTTTTTTTTAAACACAAGAAGATATCTTTAGCCTGAATTATTCATAACTAGTGAC-AACACCTGATCCAAGATACACAATCTTTTCTTTAGAGGGACATACTAACAACAACATCATTATCATCTAGATATCTAGAACAGAGTTACAAATGAAAAATATAATATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGTGCGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGCTGTCGTAACCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGTTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCAT-GG-TGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTTCGACGAGTTAAGAGCTCAAGAAGAACGACACCAAAGCTATATACGTCACTCTTATCAGTGAGCTGGAACTTC-ACAGGTATTCTGGAT-TA-ATAGCC-ATCGTCCCTTTCACCACGTCATCATGTCCATCAGCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTCGCAATAAA]

[-] EMBL BM421232             [TTTTTTTTTAAACACAAGAAGATATCTTTAGCCTGAATTATTCATAACTAGTGAC AACACCTGATCCAAGATACACAATGTTTTCTTTAGAGGGACATGCTAACAACAACATCATTATCGTCTATATATCTAGAACAGAGTTACAAATGACAAATATAATATTAGCATATAACAGAAGCGCTCACATTCAAACGACAACCATATAGTACTTGTGCAATCATCTAGCAAATTCTATGCTCATTGCAGCCACCCTCCTAAGGCTGTCGTAACCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGATGAACTTGCTGACAATGACAATGAACTAATACTTGTAAGTACCCCACGGTGTTGTCGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCCTGCTCAT TG TGGTCTGCTCTCACTAGTCATTGCTAAGCACTGGCATGCCAGCCTTGCTAGATCACCTATCAATCCCATGTTATCCTCATGTAAata                                                                                                                                                                                                                                                                              ]
[+] EMBL CB626658             [                                 TGAATTAATGATAACTAGCTACTAACACCTGATACAAGATACATAATCTTTTCTTTAGAGGGACATACTAACAACAACATCATTATCATCTAGATATCTAGAACAGAGTTACAAATGAAAAATATAATATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGTGTGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGCTGTCGTAGCCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGTTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCAT GGTTGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTTCGACGAGTTAAGAGCTCAAGAAGAACGACACCAAAGCTATATACGTCACTCTTATCAGTGAGCTGGAACTTC ACAGGTATTCTGGAT TA ATAGCC ATCG                                                                            ]
[+] EMBL CB627932             [                                                                              ATC TTTCCTTAAAGGGACATACTAACAACAACATCATTATCATCTAAATATCTAGAACAGAGTTACAAATGAAAAATATCCTATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGGGGGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGGTGTCGTAACCATTGGTTTCACCTGGGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGGTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCATGGG AGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGGAATATTTCTGGGTCTATGAGCTCAAAAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGGTGACCTTCTGCTTAAATAATGGGGTTCGACGAGTTAAGAGCTCAAGAAAAACGACACCAAAGCTATATACGTCACTCTTATCAGGGAGCTGGAACTTCAACAGGTATTCTGGATCTAGATAGCCAATCGTCCCTTTCACCACGTCATCATGTCCATCAGCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTCGCAATAAA]


>consensus_5189#0 TTTTTTTTTAAACACAAGAAGATATCTTTAGCCTGAATTATTCATAACTAGTGACAACAC CTGATCCAAGATACACAATCTTTTCTTTAGAGGGACATACTAACAACAACATCATTATCA TCTAGATATCTAGAACAGAGTTACAAATGAAAAATATAATATTGGCATATAACAGAAGCG CTCACATTCAAACGACAACCATTTAGTACTTGTGCGATCATCTAGCAAATTCTATGCTCA TTGCGGCTACCCTCCTAAGGCTGTCGTAACCATTGGTTTCACCTGTGAAATGCTCTGATG TGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCT GTTGTTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCATGGTGGTCT GCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCC CACGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACATGCCTTCCTTCAT GGCCTCTTGAAATACTAATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTTCGACGAGT TAAGAGCTCAAGAAGAACGACACCAAAGCTATATACGTCACTCTTATCAGTGAGCTGGAA CTTCACAGGTATTCTGGATTAATAGCCATCGTCCCTTTCACCACGTCATCATGTCCATCA GCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTCGCAATAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)