These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5189#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 767 fasta sequence [TTTTTTTTTAAACACAAGAAGATATCTTTAGCCTGAATTATTCATAACTAGTGAC-AACACCTGATCCAAGATACACAATCTTTTCTTTAGAGGGACATACTAACAACAACATCATTATCATCTAGATATCTAGAACAGAGTTACAAATGAAAAATATAATATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGTGCGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGCTGTCGTAACCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGTTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCAT-GG-TGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTTCGACGAGTTAAGAGCTCAAGAAGAACGACACCAAAGCTATATACGTCACTCTTATCAGTGAGCTGGAACTTC-ACAGGTATTCTGGAT-TA-ATAGCC-ATCGTCCCTTTCACCACGTCATCATGTCCATCAGCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTCGCAATAAA] [-] EMBL BM421232 [TTTTTTTTTAAACACAAGAAGATATCTTTAGCCTGAATTATTCATAACTAGTGAC AACACCTGATCCAAGATACACAATGTTTTCTTTAGAGGGACATGCTAACAACAACATCATTATCGTCTATATATCTAGAACAGAGTTACAAATGACAAATATAATATTAGCATATAACAGAAGCGCTCACATTCAAACGACAACCATATAGTACTTGTGCAATCATCTAGCAAATTCTATGCTCATTGCAGCCACCCTCCTAAGGCTGTCGTAACCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGATGAACTTGCTGACAATGACAATGAACTAATACTTGTAAGTACCCCACGGTGTTGTCGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCCTGCTCAT TG TGGTCTGCTCTCACTAGTCATTGCTAAGCACTGGCATGCCAGCCTTGCTAGATCACCTATCAATCCCATGTTATCCTCATGTAAata ] [+] EMBL CB626658 [ TGAATTAATGATAACTAGCTACTAACACCTGATACAAGATACATAATCTTTTCTTTAGAGGGACATACTAACAACAACATCATTATCATCTAGATATCTAGAACAGAGTTACAAATGAAAAATATAATATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGTGTGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGCTGTCGTAGCCATTGGTTTCACCTGTGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGTTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCAT GGTTGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGTAATATTTCTGTGTCTATGAGCTCAAGAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGCTGACCTTCTGCTTAGATAATGGTGTTCGACGAGTTAAGAGCTCAAGAAGAACGACACCAAAGCTATATACGTCACTCTTATCAGTGAGCTGGAACTTC ACAGGTATTCTGGAT TA ATAGCC ATCG ] [+] EMBL CB627932 [ ATC TTTCCTTAAAGGGACATACTAACAACAACATCATTATCATCTAAATATCTAGAACAGAGTTACAAATGAAAAATATCCTATTGGCATATAACAGAAGCGCTCACATTCAAACGACAACCATTTAGTACTTGGGGGATCATCTAGCAAATTCTATGCTCATTGCGGCTACCCTCCTAAGGGTGTCGTAACCATTGGTTTCACCTGGGAAATGCTCTGATGTGTCTGCAGCTGAACTTACTGACAGTGACAATGAACTAATACTTGTAAGTACCCCACGCTGTTGGTGTACTTGTTTTTCTATTCGTCGCAATTCCTCTGCAATCATGCTCATGGG AGGTCTGCTCTCACTAGTCATTGCTAAGTACTGGCATGCCAGCCTTGCTAGATCACCTACCAATCCCACGTTATCCTCATGGAATATTTCTGGGTCTATGAGCTCAAAAAACATGCCTTCCTTCATGGCCTCTTGAAATACTAATGCGAGGGTGACCTTCTGCTTAAATAATGGGGTTCGACGAGTTAAGAGCTCAAGAAAAACGACACCAAAGCTATATACGTCACTCTTATCAGGGAGCTGGAACTTCAACAGGTATTCTGGATCTAGATAGCCAATCGTCCCTTTCACCACGTCATCATGTCCATCAGCTGCCCTAATTTTGGAGCACCCAAAATCAGAAATCTTCGCAATAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||