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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5208 cluster # 5208       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5208#0 length = 1125 sequences # 3  

consensusID : consensus_5208#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1125
fasta sequence
                              [TCTGCACTCTATCTCCTCAAGATAAAACTCCTGGCTTGAAGCATCTGCATGGTCAAGTTATGCGAGGTGTTTGCTATGAGAATGCTATGCTTTGCCGTGTTGGGTGTCCTCACCTCGAAATTGTTGGGCCGGTGACATACATGTGGCGTCCATTTTTAAGGGAGGGTGGTGAATTGGAGACTGAAGATGTAGATTTGTCCAATTCTCAAATTATATCTGATGAAAGAAATTCTTTACGGCGCCAATTATGGATATGGATCCACCCTTCTGCTCTCAGTGAAGGGCTTGAAACATTAAGAGCCGCTTGTCATCAACAGATGCAAGAATCTGGTGACACAATCAGTTGTTGCTCACTGGAGGGGAAAATGGCAAGATTAGAAGTCATGGGAAGCAATGCTATGCAATCTCTTAAGAGTATATTGAAGCCAGTTAGCAATCCAAGTATATCCACCAAGCTAGTTAACAAAAATAATGTGACTACATCAACTGATCCTCTGTATTGCTCTACTGGCTCTCATCTTTTGAAAAGATCTGTTTTTGATAATGCTGACATTCTTCAGTCTGGTGCTATACTATCCATGATAATCCATGACCCCAGAGATAATTCAGTCGAGGGAACAGATTCTTCTAAAACAGTTTCCCTGGACCAGAATAACCAACTCATGGAGGAATACCAAGTTCCAAATGCTGATGAGACACCATCAGGGATTGGGAATATTTTGTCATCGATATGGCTGAACCCAGGAAATCACGATTTGGCCCTTTCAGACTGTAGAGAATTGTGGGATTCCAGCCTTAAGATAAATCCTCCTGTGGATGAGAAAATTCTTTGTATGGAGAAACACCACAGACGTATGAAGTTTTTCTGCCTTGATTCTGGAAATGATCAAGGACAAACAAGTCAAGAGAAGGATTCCATTGGTCGATCCTGTCCTGTTATTCTTCTGAAACATGCAAAAGGCAGTCTGATCTCTGTAGGGTGGTCTGTTATTCTACCTTTGAGTTGGGTAAAACCTTTCTGGTTTTATCTTGTATCTCATGGTGCACATGCTATTGGCTTAAGAGAGAGACGGTGGATAGCCTCAAAGCTCAAGATGCCATGCTTCCCTTATGATTATCCAGACA]

[+] EMBL CB635536             [TCTGCACTCTATCTCCTCAAGATAAAACTCCTGGCTTGAAGCATCTGCATGGTCAAGTTATGCGAGGTGTTTGCTATGAGAATGCTATGCTTTGCCGTGTTGGGTGTCCTCACCTCGAAATTGTTGGGCCGGTGACATACATGTGGCGTCCATTTTTAAGGGAGGGTGGTGAATTGGAGACTGAAGATGTAGATTTGTCCAATTCTCAAATTATATCTGATGAAAGAAATTCTTTACGGCGCCAATTATGGATATGGATCCACCCTTCTGCTCTCAGTGAAGGGCTTGAAACATTAAGAGCCGCTTGTCATCAACAGATGCAAGAATCTGGTGACACAATCAGTTGTTGCTCACTGGAGGGGAAAATGGCAAGATTAGAAGTCATGGGAAGCAATGCTATGCAATCTCTTAAGAGTATATTGAAGCCAGTTAGCAATCCAAGTATATCCACCAAGCTAGTTAACAAAAATAATGTGACTACATCAACTGATCCTCTGTATTGCTCTACTGGCTCTCATCTTTTGAAAAGATCTGTTTTTGATAATGCTGACATTCTTCAGTCTGGTGCTATACTATCCATGATAATCCATGACCCCAGAGATAATTCAGTCGAGGGAACAGATTCTTCTAAAACAGTTTCCCTGGACCAGAATAACCAACTCATGGAGGAATACCAAGTTCCAAATGCTGATGAGACACCATCAGGGATTGGGAATATTTTGTCATCGATATGGCTGAACCCAGGAAATCACGA                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU172971             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CATCAGGGATTGGGAATATTTTGTCATCGATATGGCTGAACCCAGGAAATCACGATTTGGCCCTTTCAGACTGTAGAGAATTGTGGGATTCCAGCCTTAAGATAAATCCTCCTGTGGATGAGAAAATTCTTTGTATGGAGAAACACCACAGACGTATGAAGTTTTTCTGCCTTGATTCTGGAAATGATCAAGGACAAACAAGTCAAGAGAAGGATTCCATTGGTCGATCCTGTCCTGTTATTCTTCTGAAACATGCAAAAGGCAGTCTGATCTCTGTAGGGTGGTCTGTTATTCTACCTTTGAGTTGGGTAAAACCTTTCTGGTTTTATCTTGTATCTCATGGTGCACATGCTATTGGCTTAAGAGAGAGACGGTGGATAGCCTCAAAGCTCAAGATGCCATGCTTCCCTTATGATTATCCAGACA]
[+] EMBL C74745               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCAGGGATTNGGAATATTTTGTCATCGNTATNGCTGANNCCAGGAAATCACGATTTGGCNCTTTCAGACTGTAGAGAATTGTGGGATTCCAGCCTTANGATAAATCCTCCTGTGGATGAGANNATTCTTTGTATGGAGAAACACCACAGACGTATGAAGTTTTTCTGCCTTGATTCNGGCAATGATCAAGGACAAACAAGTCANGAGAAGGNTTCCATTGGTCGATCCTGTCCTGTTATTCTTCTGAAACATGCNAAAGGCAGTCTGATCTCTGT                                                                                                                                                     ]


>consensus_5208#0 TCTGCACTCTATCTCCTCAAGATAAAACTCCTGGCTTGAAGCATCTGCATGGTCAAGTTA TGCGAGGTGTTTGCTATGAGAATGCTATGCTTTGCCGTGTTGGGTGTCCTCACCTCGAAA TTGTTGGGCCGGTGACATACATGTGGCGTCCATTTTTAAGGGAGGGTGGTGAATTGGAGA CTGAAGATGTAGATTTGTCCAATTCTCAAATTATATCTGATGAAAGAAATTCTTTACGGC GCCAATTATGGATATGGATCCACCCTTCTGCTCTCAGTGAAGGGCTTGAAACATTAAGAG CCGCTTGTCATCAACAGATGCAAGAATCTGGTGACACAATCAGTTGTTGCTCACTGGAGG GGAAAATGGCAAGATTAGAAGTCATGGGAAGCAATGCTATGCAATCTCTTAAGAGTATAT TGAAGCCAGTTAGCAATCCAAGTATATCCACCAAGCTAGTTAACAAAAATAATGTGACTA CATCAACTGATCCTCTGTATTGCTCTACTGGCTCTCATCTTTTGAAAAGATCTGTTTTTG ATAATGCTGACATTCTTCAGTCTGGTGCTATACTATCCATGATAATCCATGACCCCAGAG ATAATTCAGTCGAGGGAACAGATTCTTCTAAAACAGTTTCCCTGGACCAGAATAACCAAC TCATGGAGGAATACCAAGTTCCAAATGCTGATGAGACACCATCAGGGATTGGGAATATTT TGTCATCGATATGGCTGAACCCAGGAAATCACGATTTGGCCCTTTCAGACTGTAGAGAAT TGTGGGATTCCAGCCTTAAGATAAATCCTCCTGTGGATGAGAAAATTCTTTGTATGGAGA AACACCACAGACGTATGAAGTTTTTCTGCCTTGATTCTGGAAATGATCAAGGACAAACAA GTCAAGAGAAGGATTCCATTGGTCGATCCTGTCCTGTTATTCTTCTGAAACATGCAAAAG GCAGTCTGATCTCTGTAGGGTGGTCTGTTATTCTACCTTTGAGTTGGGTAAAACCTTTCT GGTTTTATCTTGTATCTCATGGTGCACATGCTATTGGCTTAAGAGAGAGACGGTGGATAG CCTCAAAGCTCAAGATGCCATGCTTCCCTTATGATTATCCAGACA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)