cluster # 5245

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Oryza sativa
cluster # 5245 cluster # 5245 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5245#0 length = 883 sequences # 3

consensusID : consensus_5245#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 883
fasta sequence

                              [CGAGACAAGGGGGGAGAGAGGCCACGCGCGCGCACGAGATCGATCTCCAGCAAGGTCTTGCACAACTGCGGCAAGATGGGCCTCACTTTCACGAAGCTTTTCAGCCGCCTCTTCTCCAAGAAGGAGATGAGGATCCTCATGGTCGGTCTCGACGCAGCTGGTAAAACCACAATTCTCTACAAGCTCAAGCTTGGAGAGATTGTCACCACCATTCCAACAATAGGGTTTAATGTGGAGACTGTTGAATACAAGAACATTAGCTTCACTGTCTGGGATGTCGGGGGTCAAGACAAGATCAGACCTTTGTGGAGGCACTATTTCCAGAACACTCAAGGTCTCATCTTTGTTGTTGATAGCAACGACAGAGATCGTGTGGTTGAGGCAAGGGATGAACTCCACAGGATGCTTAATGAGGATGAGTTGAGGGATGCGGTGTTGCTGGTTTTTGCTAACAAGCAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACAGATAAGCTTGGTCTCCATTCCCTGCGCCAACGCCAGTGGTATATCCAGAGTACATGCGCCACAACAGGAGAGGGNTTATATGANGGCCTTGACTGGCTCTCGAGCAACATTGCAAACAAGGCCTGATTGGATGACCAGAATACCACATTACTTAGCAGNTGCATTTTCTGGAGAAACGGAGGAGATGGTCATTTTTGATACTGAGATTTGGATTATTATTTCACTGGAGNGGTTCGGTGNATATATTGGATTTCTTCGGTAGGCTTTTCANATCTGGGTTGGTATGGTACCTANCTACTTTTTANAACCCCTTTCGGT-TTNTTAAAAGACTAATTGGCAGCTTGAACTATATCATATATTCATATACGATATACCCGAGTAATGCAGT]

[+] EMBL CB096284             [CGAGACAAGGGGGGAGAGAGGCCACGCGCGCGCACGAGATCGATCTCCAGCAAGGTCTTGCACAACTGCGGCAAGATGGGCCTCACTTTCACGAAGCTTTTCAGCCGCCTCTTCTCCAAGAAGGAGATGAGGATCCTCATGGTCGGTCTCGACGCAGCTGGTAAAACCACAATTCTCTACAAGCTCAAGCTTGGAGAGATTGTCACCACCATTCCAACAATAGGGTTTAATGTGGAGACTGTTGAATACAAGAACATTAGCTTCACTGTCTGGGATGTCGGGGGTCAAGACAAGATCAGACCTTTGTGGAGGCACTATTTCCAGAACACTCAAGGTCTCATCTTTGTTGTTGATAGCAACGACAGAGATCGTGTGGTTGAGGCAAGGGATGAACTCCACAGGATGCTTAATGAGGATGAGTTGAGGGATGCGGTGTTGCTGGTTTTTGCTAACAAGCAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACAGATAAGCTTGGTCTCCATTCCCTGCGCCAACGCCAGTGGTATATCCAGAGTACATGCGCCACAACAGGAGAGGGNTTATATGANGGCCTTGACTGGCTCTCGAGCAACATTGCAAACAAGGCCTGATTGGATGACCAGAATACCACATTACTTAGCAGNTGCATTTTCTGGAGAAACGGAGGAGATGGTCATTTTTGATACTGAGATTTGGATTATTATTTCACTGGAGNGGTTCGGTGNATATATTGGATTTCTTCGGTAGGCTTTTCANATCTGGGTTGGTATGGTACCTANCTACTTTTTANAACCCCTTTCGGT TTNTTAAAAGACTAATTGGCAGC                                               ]
[+] EMBL AK067217             [                  AGGCCACGCGCGCGCACGAGATCGATCTCCAGCAAGGTCTTGCACAACTGCGGCAAGATGGGCCTCACTTTCACGAAGCTTTTCAGCCGCCTCTTCTCCAAGAAGGAGATGAGGATCCTCATGGTCGGTCTCGACGCAGCTGGTAAAACCACAATTCTCTACAAGCTCAAGCTTGGAGAGATTGTCACCACCATTCCAACAATAGGGTTTAATGTGGAGACTGTTGAATACAAGAACATTAGCTTCACTGTCTGGGATGTCGGGGGTCAAGACAAGATCAGACCTTTGTGGAGGCACTATTTCCAGAACACTCAAGGTCTCATCTTTGTTGTTGATAGCAACGACAGAGATCGTGTGGTTGAGGCAAGGGATGAACTCCACAGGATGCTTAATGAGGATGAGTTGAGGGATGCGGTGTTGCTGGTTTTTGCTAACAAGCAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACAGATAAGCTTGGTCTCCATTCCCTGCGCCAACGCCACTGGTATATCCAGAGTACATGCGCCACAACAGGAGAGGGTTTATATGAGGGCCTTGACTGGCTCTCGAGCAACATTGCAAACAAGGCCTGATTGGATGACCAGAATACCACATTACATAGCAGTTGCATTTTCTGGAG AACGGAGGAGATGGTCA TTTTGATACTGAGATTTGGATTATTATTTCACTGGAG TGTTCGTTGAATATATTGTATTTCTTCGTTAGGCTTTTCAGATCTGGTTTGTTATGTTACCTAGCTACTCTCTACAACCCCTCCCGGTATTATTAAGAGACTAATTGTCAGCTTGAACTATATCATATATTCATATACGATATACCCGAGTAATGCAGT]
[+] EMBL C26994               [                                     GATCGATCTCCAGCAAGGTCTTGCACAACTNCGGCAAGATGGGCCTCACTTTCACGAAGCTTTTCAGCCGCCTCTTCTCCAAGAAGGAGATGAGGNTCCTCATGGTCGGTCTCGACGCAGCTGGTAAAACCACAATTNTCTACANGCTCAAGCTTGGAGAGATTGTCACCACCATTCCAACAATAGGGTTTAATGTGGAGACTGTTGAATACANGAACATTAGCTTCACTGTCTGGGATGTCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_5245#0
CGAGACAAGGGGGGAGAGAGGCCACGCGCGCGCACGAGATCGATCTCCAGCAAGGTCTTG
CACAACTGCGGCAAGATGGGCCTCACTTTCACGAAGCTTTTCAGCCGCCTCTTCTCCAAG
AAGGAGATGAGGATCCTCATGGTCGGTCTCGACGCAGCTGGTAAAACCACAATTCTCTAC
AAGCTCAAGCTTGGAGAGATTGTCACCACCATTCCAACAATAGGGTTTAATGTGGAGACT
GTTGAATACAAGAACATTAGCTTCACTGTCTGGGATGTCGGGGGTCAAGACAAGATCAGA
CCTTTGTGGAGGCACTATTTCCAGAACACTCAAGGTCTCATCTTTGTTGTTGATAGCAAC
GACAGAGATCGTGTGGTTGAGGCAAGGGATGAACTCCACAGGATGCTTAATGAGGATGAG
TTGAGGGATGCGGTGTTGCTGGTTTTTGCTAACAAGCAAGATCTTCCTAATGCAATGAAT
GCTGCTGAGATCACAGATAAGCTTGGTCTCCATTCCCTGCGCCAACGCCAGTGGTATATC
CAGAGTACATGCGCCACAACAGGAGAGGGNTTATATGANGGCCTTGACTGGCTCTCGAGC
AACATTGCAAACAAGGCCTGATTGGATGACCAGAATACCACATTACTTAGCAGNTGCATT
TTCTGGAGAAACGGAGGAGATGGTCATTTTTGATACTGAGATTTGGATTATTATTTCACT
GGAGNGGTTCGGTGNATATATTGGATTTCTTCGGTAGGCTTTTCANATCTGGGTTGGTAT
GGTACCTANCTACTTTTTANAACCCCTTTCGGTTTNTTAAAAGACTAATTGGCAGCTTGA
ACTATATCATATATTCATATACGATATACCCGAGTAATGCAGT

clustalw multiple alignements is not computed in this case