These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5256#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1781 fasta sequence [GGCGGCCCATTCCTCCCGCACGACGCACGCGGCTCCGACCCCGTCCACTGGCTGGTCTGCACTCTCCCATCTCACGCCACCGCGCGACGCGACCAATTCCACGGCCTCCTCCCGGCTCCCACAAAAAGCGATGCCGCCTGCCGCCACCACGAAACGGAGCGCCACATAAGTCGTGTCCGTCCACTCACCCACGCCACCGCCACCGCCACGCATGGCCGCTCCGCCGTGCCCGCCGCGGCGGCCCATCTCCGCGCCGTGCTTCCTCCTCTGCTTCCTCCTCGGCTTCGTCGCGGGCCTCTTCCCCTTCGCCCACCGCCACCTCCACCTCGACCTCCACCTCCCGCTCCCTCCCCCTGCGACCGCCATCCTCGTCAGGGAGGACCCGCCGTCCGTCGTCGTCGACGTCGACACCCCGTTGCCGGCGGCGGCGGAGGAGCGGAAGCTGCTGCTGGTCGTGACGCCGACCCGCGCACGCCCGCTGCAGGCGTACTACCTGCGCCGGCTCGCGCACACGCTCCGCCTCGCGCCGTCCCCGCTGCTCTGGCTCGTCGTCGAGTCCGGCGCCGCCACGCGCGACACGGCCGCGCTCCTCCGCGGCTGCGGGGTCATGTACCGCCACCTCTCCTCCCCCGTCCCCGACGCGCCCCAGGATCGTCCCCGCCGCCGCGGACGGAGGCAGGACCGCCCGGCTGTTGACAGCCGCGCCCGCCAGCGGAACACGGCGCTGGATCACATCGAGCACCACCGCCTACACGGCATCGTCTACTTCGCCGACGAGGACAACGTCTACTCCCTTGACCTCTTCTACCATCTTCGCGACATTAGGAGTTTTGGAACCTGGCCTGTGGCAACCTTGCCCCCCGGGAAGAGTAAGACGATACTACAAGGACCAGTCTGTGAAGGTAGTCGTGTGGTGGGATGGCACACAACAGATAGGAGCAAGAATCAGAGGAGGTTCCATGTAGATATGTCTGGTTTTGCATTCAACAGCAGTAAGCTTTGGGACGCCAAGAACAGAGGTCATCAGGCCTGGAATTACATCCGGCAGCTCGACACGGCAAAGGAGGGGTTTCAAGAGACGGCATTTATAGAGCAGCTTGTAGAAGATGAAACTCATATGGAGGGCGTACC-TCCTGGTTGTTCAAAAATTATGAATTTTCATCTTCATCTGGAAGACAAGAATGCCATCTACCTGAACGGGTGGCAAACCACTCAAAACC-TGGATGTAATTATTCCTTT-GAAGAAGGAAGCAAGGCCCCTACTATAGCTCCTTGCTTACCTTGCAGATCCTCTTTTCGATGTGGCTGAAGAGAAGGAATGTATTTCAAGTCATACCAGGGCGCCACAGAAACTGAGGTGGTTCATATATACCAGAGTGCCATAGAAACTGAAGTGGTTCTTTTGGCTTGTCATCTTATCGAAAGTCAGATAGGATGGTTTGTGGATTAGGTGTACATACAACATAAACACATGAAGAAATCTGCGCTTACTTTTCACATCTAACATGTAAAGATGCTAATCCTGATGGCAATTTTGTTTATTCTAAATCCTTAGTGGCTGTTTGCCCCTTACCTCCATGGCTTGCTATTTTGTTTGCTGCAATTTTGCATTTTGTTTTTGTTTTTTCATGTGTCCTCGACAGTGCGGGGGTAAGTTTTCAGTCAGTCATAAGTTTACATCTGATCTCAACATTTTATAATCCTGTGCGCAAGAGTTTCGAGAGAAATTAACGACAGCAATTGTGGGTAGATGTCACTACTACTGAAAAAAAAAAAAAAAAA] [+] EMBL AK107374 [GGCGGCCCATTCCTCCCGCACGACGCACGCGGCTCCGACCCCGTCCACTGGCTGGTCTGCACTCTCCCATCTCACGCCACCGCGCGACGCGACCAATTCCACGGCCTCCTCCCGGCTCCCACAAAAAGCGATGCCGCCTGCCGCCACCACGAAACGGAGCGCCACATAAGTCGTGTCCGTCCACTCACCCACGCCACCGCCACCGCCACGCATGGCCGCTCCGCCGTGCCCGCCGCGGCGGCCCATCTCCGCGCCGTGCTTCCTCCTCTGCTTCCTCCTCGGCTTCGTCGCGGGCCTCTTCCCCTTCGCCCACCGCCACCTCCACCTCGACCTCCACCTCCCGCTCCCTCCCCCTGCGACCGCCATCCTCGTCAGGGAGGACCCGCCGTCCGTCGTCGTCGACGTCGACACCCCGTTGCCGGCGGCGGCGGAGGAGCGGAAGCTGCTGCTGGTCGTGACGCCGACCCGCGCACGCCCGCTGCAGGCGTACTACCTGCGCCGGCTCGCGCACACGCTCCGCCTCGCGCCGTCCCCGCTGCTCTGGCTCGTCGTCGAGTCCGGCGCCGCCACGCGCGACACGGCCGCGCTCCTCCGCGGCTGCGGGGTCATGTACCGCCACCTCTCCTCCCCCGTCCCCGACGCGCCCCAGGATCGTCCCCGCCGCCGCGGACGGAGGCAGGACCGCCCGGCTGTTGACAGCCGCGCCCGCCAGCGGAACACGGCGCTGGATCACATCGAGCACCACCGCCTACACGGCATCGTCTACTTCGCCGACGAGGACAACGTCTACTCCCTTGACCTCTTCTACCATCTTCGCGACATTAGGAGTTTTGGAACCTGGCCTGTGGCAACCTTGCCCCCCGGGAAGAGTAAGACGATACTACAAGGACCAGTCTGTGAAGGTAGTCGTGTGGTGGGATGGCACACAACAGATAGGAGCAAGAATCAGAGGAGGTTCCATGTAGATATGTCTGGTTTTGCATTCAACAGCAGTAAGCTTTGGGACGCCAAGAACAGAGGTCATCAGGCCTGGAATTACATCCGGCAGCTCGACACGGCAAAGGAGGGGTTTCAAGAGACGGCATTTATAGAGCAGCTTGTAGAAGATGAAACTCATATGGAGGGCGTACC TCCTGGTTGTTCAAAAATTATGAATTTTCATCTTCATCTGGAAGACAAGAATGCCATCTACCTGAACGGGTGGCAAACCACTCAAAACC TGGATGTAATTATTCCTTT GAAGAAGGAAGCAAGGCCCCTACTATAGCTCCTTGCTTACCTTGCAGATCCTCTTTTCGATGTGGCTGAAGAGAAGGAATGTATTTCAAGTCATACCAGGGCGCCACAGAAACTGAGGTGGTTCATATATACCAGAGTGCCATAGAAACTGAAGTGGTTCTTTTGGCTTGTCATCTTATCGAAAGTCAGATAGGATGGTTTGTGGATTAGGTGTACATACAACATAAACACATGAAGAAATCTGCGCTTACTTTTCACATCTAACATGTAAAGATGCTAATCCTGATGGCAATTTTGTTTATTCTAAATCCTTAGTGGCTG ] [+] EMBL CF308469 [ ACGGAGGCGGGACCGCCCGGCTGTTGACAGCCGCGCCCGCCAGCGGAACACGGCGCTGGATCACATCGAGCACCACCGCCTACACGGCATCGTCTACTTCGCCGACGAGGACAACGTCTACTCCCTTGACCTCTTCTACCATCTTCGCGACATTAGGAGTTTTGGAACCTGGCCTGTGGCAACCTTGGCCCCCGGGAAGAGTAAGACGATACTACAAGGACCAGTCTGTGAAGGTAGTCGTGTGGTGGGATGGCACACAACAGATAGGAGCAAGAATCAGAGGAGGTTCCATGTAGATATGTCTGGTTTTGCATTCAACAGCAGTAAGCTTTGGGACGCCAAGAACAGAGGTCATCAGGCCTGGAATTACATCCGGCAGCTCGACACGGCAAAGGAGGGGTTTCAAGAGACGGCATTTATAGAGCAGCTTGTAGAAGATGAAACTCATATGGAGGGCGTACCNTCCTGGTTGTTCAAAAATTATGAATTTTCATCTTCATCTGGAAGACAAGAATGCCATCTACCTGAACGGGTGGCAAACCACTCAAAACCTTGGATGTAATTATTCCTTTGGAAGAA GAAGCAAGGCCCCTACTATAGCTCCTTGCT ] [-] EMBL CF308470 [ GCCCCTACTATAGCTCCTTGCTTACCTTGCAGATCCTCTTTTCGATGTGGCTGAAGAGAAGGAATGTATTTCAAGTCATACCAGGGCGCCACAGAAACTGAGGTGGTTCATATATACCAGAGTGCCATAGAAACTGAAGTGGTTCTTTTGGCTTGTCATCTTATCGAAAGTCAGATAGGATGGTTTGTGGATTAGGTGTACATACAACATAAACACATGAAGAAATTTGCGCTTACTTTTCACATTTAACATGTAAAGATGCTAATCCTGATGGCAATTTTGTTTATTTTAAATCCTTAGTGGCTGTTTGCCCCTTACCTCCATGGCTTGCTATTTTGTTTGCTGCAATTTTGCATTTTGTTTTTGTTTTTTCATGTGTCCTCGACAGTGCGGGGGTAAGTTTTCAGTCAGTCATAAGTTTACATCTGATCTCAACATTTTATAATCCTGTGCGCAAGAGTTTCGAGAGAAATTAACGACAGCAATTGTGGGTAGATGTCACTACTACTGAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||