Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5274 cluster # 5274       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5274#0 length = 1252 sequences # 1  
consensus_5274#1 length = 771 sequences # 1  
consensus_5274#2 length = 739 sequences # 1  

consensusID : consensus_5274#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1252
fasta sequence
                              [CTCTCCGCCGCACGGCCGCCTCCGCCTCCGGCTTCCTCCGCCGCCGCCTCCTCTCCGAGCTCGCCGGGAACGGCGCGCCACTCCCGCGCGTCGGGGCCGTGTACGCCTTCGGGGACAACAGCCACGGCGCGGCGGGGCAGCCGGCGCCGGCCGCCGACGTCTACGTCCCCACGCCCGTGCCCTCCCTCCCGACGTCCGTCGCCGCCGTCGCCGCCGGGCACTACCACTCCCTCGCGGTTTCCGCCGAAGGGGAGGTCTGGGCGTGGGGCCGCAACGATGAAGGTCAGCTCGGCCGCGGGCACCACGCCCCGAGGAATACTTGGAGCAAGCCTGAAAAAGTGAGAGGATTGGAAAATGTTCAAGTCCGAGCTGTATCTGCTTGTGGGGTTGTTTCAGCAGCAATTGGGTGTGATGGCTCTTTATGGGTTTGGGGGAGATCAAAGCGTGGCCAACTTGGGCTTGGAAAGGACATTGTAGAGGCTGCAGTACCTTCTAGAGTGGAAGCACTTGCTAATTATGATATTGTCAAGGTTCTAACTTTCTCCCTGAAATTAAGTAGTCGGATGTTTGCTCCCTTGTGAGAAAAAAGTTGTTAATTGAAGGAATGATGCTAGGTATCATTTGGTCGAGTTCATTCGGTTGCTCTCACATCAAAGGGAGAGGTTTGGGCATGGGGATCTGGCCGAAACGGCAGGCTAGGTTTGGGAAGCTCGATGGATGAGCCTGAGCCTTTCCTCATCGATACCCTGGAAGGAGCAGAGGTTTCACAGGTTGCTGCTGGGATGGACCATACTCTTCTATTGGTTGCTGAGTAGGCTGGGGTTTTCTTCACCACCGAAAGTCCTTTGATTCTTGCCGTTGTCAGTGGAGAGGTTGTCATTGTCCATCTACTGGATACGATCTTTAAAACAAACAGGCGATGTTACTCGATATGCTTGGAACCATGAAATTCAGATGTGTTTCTTCCAGCTAGTTTGACATCACATTCCCCTTGAAAGAGTTAACAGAATGAAGATAGCAAAAGCTAGTCAGACGCCAGTGCCAGTGTGCATTCTCAAACCTCCTCTTATAGAGCATCTTTGTGTGTGAAAAGTTCATTTTCTTCCATCTGTAGTTGTAGACTCGGTACTTATGTTCTATGCCAAAGCTTACCCTATTCCCTGGGATTTGAGGTCTTTGAAAACTCAAAACTCCTTGTAATAAGTTTTGTGTGGTGAACAATATCCTCCGGCAAAATCTTGGTGAAATTTTC]

[+] EMBL AK105298             [CTCTCCGCCGCACGGCCGCCTCCGCCTCCGGCTTCCTCCGCCGCCGCCTCCTCTCCGAGCTCGCCGGGAACGGCGCGCCACTCCCGCGCGTCGGGGCCGTGTACGCCTTCGGGGACAACAGCCACGGCGCGGCGGGGCAGCCGGCGCCGGCCGCCGACGTCTACGTCCCCACGCCCGTGCCCTCCCTCCCGACGTCCGTCGCCGCCGTCGCCGCCGGGCACTACCACTCCCTCGCGGTTTCCGCCGAAGGGGAGGTCTGGGCGTGGGGCCGCAACGATGAAGGTCAGCTCGGCCGCGGGCACCACGCCCCGAGGAATACTTGGAGCAAGCCTGAAAAAGTGAGAGGATTGGAAAATGTTCAAGTCCGAGCTGTATCTGCTTGTGGGGTTGTTTCAGCAGCAATTGGGTGTGATGGCTCTTTATGGGTTTGGGGGAGATCAAAGCGTGGCCAACTTGGGCTTGGAAAGGACATTGTAGAGGCTGCAGTACCTTCTAGAGTGGAAGCACTTGCTAATTATGATATTGTCAAGGTTCTAACTTTCTCCCTGAAATTAAGTAGTCGGATGTTTGCTCCCTTGTGAGAAAAAAGTTGTTAATTGAAGGAATGATGCTAGGTATCATTTGGTCGAGTTCATTCGGTTGCTCTCACATCAAAGGGAGAGGTTTGGGCATGGGGATCTGGCCGAAACGGCAGGCTAGGTTTGGGAAGCTCGATGGATGAGCCTGAGCCTTTCCTCATCGATACCCTGGAAGGAGCAGAGGTTTCACAGGTTGCTGCTGGGATGGACCATACTCTTCTATTGGTTGCTGAGTAGGCTGGGGTTTTCTTCACCACCGAAAGTCCTTTGATTCTTGCCGTTGTCAGTGGAGAGGTTGTCATTGTCCATCTACTGGATACGATCTTTAAAACAAACAGGCGATGTTACTCGATATGCTTGGAACCATGAAATTCAGATGTGTTTCTTCCAGCTAGTTTGACATCACATTCCCCTTGAAAGAGTTAACAGAATGAAGATAGCAAAAGCTAGTCAGACGCCAGTGCCAGTGTGCATTCTCAAACCTCCTCTTATAGAGCATCTTTGTGTGTGAAAAGTTCATTTTCTTCCATCTGTAGTTGTAGACTCGGTACTTATGTTCTATGCCAAAGCTTACCCTATTCCCTGGGATTTGAGGTCTTTGAAAACTCAAAACTCCTTGTAATAAGTTTTGTGTGGTGAACAATATCCTCCGGCAAAATCTTGGTGAAATTTTC]


>consensus_5274#0 CTCTCCGCCGCACGGCCGCCTCCGCCTCCGGCTTCCTCCGCCGCCGCCTCCTCTCCGAGC TCGCCGGGAACGGCGCGCCACTCCCGCGCGTCGGGGCCGTGTACGCCTTCGGGGACAACA GCCACGGCGCGGCGGGGCAGCCGGCGCCGGCCGCCGACGTCTACGTCCCCACGCCCGTGC CCTCCCTCCCGACGTCCGTCGCCGCCGTCGCCGCCGGGCACTACCACTCCCTCGCGGTTT CCGCCGAAGGGGAGGTCTGGGCGTGGGGCCGCAACGATGAAGGTCAGCTCGGCCGCGGGC ACCACGCCCCGAGGAATACTTGGAGCAAGCCTGAAAAAGTGAGAGGATTGGAAAATGTTC AAGTCCGAGCTGTATCTGCTTGTGGGGTTGTTTCAGCAGCAATTGGGTGTGATGGCTCTT TATGGGTTTGGGGGAGATCAAAGCGTGGCCAACTTGGGCTTGGAAAGGACATTGTAGAGG CTGCAGTACCTTCTAGAGTGGAAGCACTTGCTAATTATGATATTGTCAAGGTTCTAACTT TCTCCCTGAAATTAAGTAGTCGGATGTTTGCTCCCTTGTGAGAAAAAAGTTGTTAATTGA AGGAATGATGCTAGGTATCATTTGGTCGAGTTCATTCGGTTGCTCTCACATCAAAGGGAG AGGTTTGGGCATGGGGATCTGGCCGAAACGGCAGGCTAGGTTTGGGAAGCTCGATGGATG AGCCTGAGCCTTTCCTCATCGATACCCTGGAAGGAGCAGAGGTTTCACAGGTTGCTGCTG GGATGGACCATACTCTTCTATTGGTTGCTGAGTAGGCTGGGGTTTTCTTCACCACCGAAA GTCCTTTGATTCTTGCCGTTGTCAGTGGAGAGGTTGTCATTGTCCATCTACTGGATACGA TCTTTAAAACAAACAGGCGATGTTACTCGATATGCTTGGAACCATGAAATTCAGATGTGT TTCTTCCAGCTAGTTTGACATCACATTCCCCTTGAAAGAGTTAACAGAATGAAGATAGCA AAAGCTAGTCAGACGCCAGTGCCAGTGTGCATTCTCAAACCTCCTCTTATAGAGCATCTT TGTGTGTGAAAAGTTCATTTTCTTCCATCTGTAGTTGTAGACTCGGTACTTATGTTCTAT GCCAAAGCTTACCCTATTCCCTGGGATTTGAGGTCTTTGAAAACTCAAAACTCCTTGTAA TAAGTTTTGTGTGGTGAACAATATCCTCCGGCAAAATCTTGGTGAAATTTTC



consensusID : consensus_5274#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 771
fasta sequence
                              [CGGCGCGGCGGGGCAGCCGGCGCCGGCCGCCGACGTCTACGTCCCCACGCCCGTGCCCTCCCTCCCGACGTCCGTCGCCGCCGTCGCCGCCGGGCACTACCACTCCCTCGCGGTTTCCGCCGAAGGGGAGGTCTGGGCGTGGGGCCGCAACGATGAAGGTCAGCTCGGCCGCGGGCACCACGCCCCGAGGAATACTTGGAGCAAGCCTGAAAAAGTGAGAGGATTGGAAAATGTTCAAGTCCGAGCTGTATCTGCTTGTGGGGTTGTTTCAGCAGCAATTGGGTGTGATGGCTCTTTATGGGTTTGGGGGAGATCAAAGCGTGGCCAACTTGGGCTTGGAAAGGACATTGTAGAGGCTGCAGTACCTTCTAGAGTGGAAGCACTTGCTAATTATGATATTGTCAAGGTATCATTTGGTTGGGGACATGCTATGGCATTGACAAAGGATGGAGGGTTACTTGGCTGGGGATATTCAGAAAACGGAAGGTTAGGAGAAATTGGCCATATTACTCAGGCTTCTTCTGCCAAAGAATTACTTGGAAAAACAGTTGACAAGTACTCTAGCTCAATGCTAGAGGCCGTTGAAAAGATGGTTGAGGAAAAAATAAGGAGTGAAGACAATATGCCCATCATCTGGGAACCTTCGCTTGTTCATGAAGTGTGTCATGTTGAGGTGTCTGATGTGTCATGTGGGCTCGATCATTCTCTGGTTCTCTGCTCTGATGGCATCGTACTGAGCGGTGGAGACAACACTTACGGACAGCTTGGCNA]

[+] EMBL CB674689             [CGGCGCGGCGGGGCAGCCGGCGCCGGCCGCCGACGTCTACGTCCCCACGCCCGTGCCCTCCCTCCCGACGTCCGTCGCCGCCGTCGCCGCCGGGCACTACCACTCCCTCGCGGTTTCCGCCGAAGGGGAGGTCTGGGCGTGGGGCCGCAACGATGAAGGTCAGCTCGGCCGCGGGCACCACGCCCCGAGGAATACTTGGAGCAAGCCTGAAAAAGTGAGAGGATTGGAAAATGTTCAAGTCCGAGCTGTATCTGCTTGTGGGGTTGTTTCAGCAGCAATTGGGTGTGATGGCTCTTTATGGGTTTGGGGGAGATCAAAGCGTGGCCAACTTGGGCTTGGAAAGGACATTGTAGAGGCTGCAGTACCTTCTAGAGTGGAAGCACTTGCTAATTATGATATTGTCAAGGTATCATTTGGTTGGGGACATGCTATGGCATTGACAAAGGATGGAGGGTTACTTGGCTGGGGATATTCAGAAAACGGAAGGTTAGGAGAAATTGGCCATATTACTCAGGCTTCTTCTGCCAAAGAATTACTTGGAAAAACAGTTGACAAGTACTCTAGCTCAATGCTAGAGGCCGTTGAAAAGATGGTTGAGGAAAAAATAAGGAGTGAAGACAATATGCCCATCATCTGGGAACCTTCGCTTGTTCATGAAGTGTGTCATGTTGAGGTGTCTGATGTGTCATGTGGGCTCGATCATTCTCTGGTTCTCTGCTCTGATGGCATCGTACTGAGCGGTGGAGACAACACTTACGGACAGCTTGGCNA]


>consensus_5274#1 CGGCGCGGCGGGGCAGCCGGCGCCGGCCGCCGACGTCTACGTCCCCACGCCCGTGCCCTC CCTCCCGACGTCCGTCGCCGCCGTCGCCGCCGGGCACTACCACTCCCTCGCGGTTTCCGC CGAAGGGGAGGTCTGGGCGTGGGGCCGCAACGATGAAGGTCAGCTCGGCCGCGGGCACCA CGCCCCGAGGAATACTTGGAGCAAGCCTGAAAAAGTGAGAGGATTGGAAAATGTTCAAGT CCGAGCTGTATCTGCTTGTGGGGTTGTTTCAGCAGCAATTGGGTGTGATGGCTCTTTATG GGTTTGGGGGAGATCAAAGCGTGGCCAACTTGGGCTTGGAAAGGACATTGTAGAGGCTGC AGTACCTTCTAGAGTGGAAGCACTTGCTAATTATGATATTGTCAAGGTATCATTTGGTTG GGGACATGCTATGGCATTGACAAAGGATGGAGGGTTACTTGGCTGGGGATATTCAGAAAA CGGAAGGTTAGGAGAAATTGGCCATATTACTCAGGCTTCTTCTGCCAAAGAATTACTTGG AAAAACAGTTGACAAGTACTCTAGCTCAATGCTAGAGGCCGTTGAAAAGATGGTTGAGGA AAAAATAAGGAGTGAAGACAATATGCCCATCATCTGGGAACCTTCGCTTGTTCATGAAGT GTGTCATGTTGAGGTGTCTGATGTGTCATGTGGGCTCGATCATTCTCTGGTTCTCTGCTC TGATGGCATCGTACTGAGCGGTGGAGACAACACTTACGGACAGCTTGGCNA



consensusID : consensus_5274#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 739
fasta sequence
                              [GACGAGACAAGGGGATGGAACTGCAGCTCCCAGCTTGGACGACCTGGCAAAGAAGACGTGCCTGCACTAGTCGACGGTCTGAATGGAGAGAGGCCAGTGTCGGCCTCGGCTGGTCGAGTTCATTCGGTTGCTCTCACATCAAAGGGAGAGGTTTGGGCATGGGGATCTGGCCGAAACGGCAGGCTAGGTTTGGGAAGCTCGATGGATGAGCCTGAGCCTTTCCTCATCGATACCCTGGAAGGAGCAGAGGTTTCACAGGTTGCTGCTGGGATGGACCATACTCTTCTATTGGTTGCTGAGTAGGCCGGGGTTTTCTTCACCACCGAAAGTCCTTTGATTCTTGCCGTTGTCAGTGGAGAGGTTGTCATTGTCCATCTACTGGATACGATCTTTAAAACAAACAGGCGATGTTACTCGATATGCTTGGAACCATGAAATTCAGATGTGTTTCTTCCAGCTAGTTTGACATCACATTCCCCCTGAAAGAGTTAACAGAATGAAGATAGCAAAAGCTAGTCAGACGCCAGTGCCAGTGTGCATTCTCAAACCTCCTCTTATAGAGCATCTTTGTGTGTGAAAAGTTCATTTTCTTCCATCTGTAGTTGTAGACTCGGTACTTATGTTCTATGCCAAAGCTTACCCTATTCCCTGGGATTTGAGGTCTTTGAAAACTCAAAACTCCTTGTAATAAGNTTTGNGTGGTGAACAATATCCTCCAGTAGAATCTTGGTGAAATTTT]

[+] EMBL CA767375             [GACGAGACAAGGGGATGGAACTGCAGCTCCCAGCTTGGACGACCTGGCAAAGAAGACGTGCCTGCACTAGTCGACGGTCTGAATGGAGAGAGGCCAGTGTCGGCCTCGGCTGGTCGAGTTCATTCGGTTGCTCTCACATCAAAGGGAGAGGTTTGGGCATGGGGATCTGGCCGAAACGGCAGGCTAGGTTTGGGAAGCTCGATGGATGAGCCTGAGCCTTTCCTCATCGATACCCTGGAAGGAGCAGAGGTTTCACAGGTTGCTGCTGGGATGGACCATACTCTTCTATTGGTTGCTGAGTAGGCCGGGGTTTTCTTCACCACCGAAAGTCCTTTGATTCTTGCCGTTGTCAGTGGAGAGGTTGTCATTGTCCATCTACTGGATACGATCTTTAAAACAAACAGGCGATGTTACTCGATATGCTTGGAACCATGAAATTCAGATGTGTTTCTTCCAGCTAGTTTGACATCACATTCCCCCTGAAAGAGTTAACAGAATGAAGATAGCAAAAGCTAGTCAGACGCCAGTGCCAGTGTGCATTCTCAAACCTCCTCTTATAGAGCATCTTTGTGTGTGAAAAGTTCATTTTCTTCCATCTGTAGTTGTAGACTCGGTACTTATGTTCTATGCCAAAGCTTACCCTATTCCCTGGGATTTGAGGTCTTTGAAAACTCAAAACTCCTTGTAATAAGNTTTGNGTGGTGAACAATATCCTCCAGTAGAATCTTGGTGAAATTTT]


>consensus_5274#2 GACGAGACAAGGGGATGGAACTGCAGCTCCCAGCTTGGACGACCTGGCAAAGAAGACGTG CCTGCACTAGTCGACGGTCTGAATGGAGAGAGGCCAGTGTCGGCCTCGGCTGGTCGAGTT CATTCGGTTGCTCTCACATCAAAGGGAGAGGTTTGGGCATGGGGATCTGGCCGAAACGGC AGGCTAGGTTTGGGAAGCTCGATGGATGAGCCTGAGCCTTTCCTCATCGATACCCTGGAA GGAGCAGAGGTTTCACAGGTTGCTGCTGGGATGGACCATACTCTTCTATTGGTTGCTGAG TAGGCCGGGGTTTTCTTCACCACCGAAAGTCCTTTGATTCTTGCCGTTGTCAGTGGAGAG GTTGTCATTGTCCATCTACTGGATACGATCTTTAAAACAAACAGGCGATGTTACTCGATA TGCTTGGAACCATGAAATTCAGATGTGTTTCTTCCAGCTAGTTTGACATCACATTCCCCC TGAAAGAGTTAACAGAATGAAGATAGCAAAAGCTAGTCAGACGCCAGTGCCAGTGTGCAT TCTCAAACCTCCTCTTATAGAGCATCTTTGTGTGTGAAAAGTTCATTTTCTTCCATCTGT AGTTGTAGACTCGGTACTTATGTTCTATGCCAAAGCTTACCCTATTCCCTGGGATTTGAG GTCTTTGAAAACTCAAAACTCCTTGTAATAAGNTTTGNGTGGTGAACAATATCCTCCAGT AGAATCTTGGTGAAATTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5274#0      CTCTCCGCCGCACGGCCGCCTCCGCCTCCGGCTTCCTCCGCCGCCGCCTCCTCTCCGAGC 60
consensus_5274#2      ------------------------------------------------------------
consensus_5274#1      ------------------------------------------------------------
                                                                                  

consensus_5274#0      TCGCCGGGAACGGCGCGCCACTCCCGCGCGTCGGGGCCGTGTACGCCTTCGGGGACAACA 120
consensus_5274#2      ------------------------------------------------------------
consensus_5274#1      ------------------------------------------------------------
                                                                                  

consensus_5274#0      GCCACGGCGCGGCGGGGCAGCCGGCGCCGGCCGCCGACGTCTACGTCCCCACGCCCGTGC 180
consensus_5274#2      ------------------------------------------------------------
consensus_5274#1      ------------------------------------------------------------
                                                                                  

consensus_5274#0      CCTCCCTCCCGACGTCCGTCGCCGCCGTCGCCGCCGGGCACTACCACTCCCTCGCGGTTT 240
consensus_5274#2      ------------------------------------------------------------
consensus_5274#1      ------------------------------------------------------------
                                                                                  

consensus_5274#0      CCGCCGAAGGGGAGGTCTGGGCGTGGGGCCGCAACGATGAAGGTCAGCTCGGCCGCGGGC 300
consensus_5274#2      ------------------------------------------------------------
consensus_5274#1      ------------------------------------------------------------
                                                                                  

consensus_5274#0      ACCACGCCCCGAGGAATACTTGGAGCAAGCCTGAAAAAGTGAGAGGATTGGAAAATGTTC 360
consensus_5274#2      ------------------------------------------------------------
consensus_5274#1      ------------------------------------------------------------
                                                                                  

consensus_5274#0      AAGTCCGAGCTGTATCTGCTTGTGGGGTTGTTTCAGCAGCAATTGGGTGTGATGGCTCTT 420
consensus_5274#2      ------------------------------------------------------------
consensus_5274#1      ------------------------------------------------------------
                                                                                  

consensus_5274#0      TATGGGTTTGGGGGAGATCAAAGCGTGGCCAACTTGGGCTTGGAAAGGACATTGTAGAGG 480
consensus_5274#2      ------------------------------------------------------------
consensus_5274#1      ------------------------------------------------------------
                                                                                  

consensus_5274#0      CTGCAGTACCTTCTAGAGTGGAAGCACTTGCTAATTATGATATTG-TCAAGGTTCTA-AC 538
consensus_5274#2      ---------------------------------GACGAGACAAGG-GGATGGAACTGCAG 26
consensus_5274#1      --------------------------------CGGCGCGGCGGGGCAGCCGGCGCCG--G 26
                                                            *     *     **  *     

consensus_5274#0      TTTCTCCCTGAAATTAAGTAGTCGGATGTTTGCTCCC----TTGTGAGAAAAAA--GTTG 592
consensus_5274#2      CTCCCAGCTTGGACGACCTGGCAAAGAAGACGTGCCT----GCACTAGTCGACG--GTC- 79
consensus_5274#1      CCGCCGACGTCTACGTCCCCACGCCCGTGCCCTCCCTCCCGACGTCCGTCGCCGCCGTCG 86
                         *   *    *                     **           *        **  

consensus_5274#0      TTAATTGAAGGAATG---ATGC-TAGGTATCATTTGGTCGAGTTCATTCGGT-TGCTCTC 647
consensus_5274#2      TGAATGGAGAGAGGC---CAGTGTCGGCCTCGGCTGGTCGAGTTCATTCGGT-TGCTCTC 135
consensus_5274#1      CCGCCGGGCACTACCACTCCCTCGCGGTTTCCGCCGAAGGGGAGGTCTGGGCGTGGGGCC 146
                            *                  **  **    *   * *     * **  **    *

consensus_5274#0      ACATCAAAGGGAGA-GGTTTGGGCATGGGGATCTGGCC----GAAACG------GCAGGC 696
consensus_5274#2      ACATCAAAGGGAGA-GGTTTGGGCATGGGGATCTGGCC----GAAACG------GCAGGC 184
consensus_5274#1      GCAACGATGAAGGTCAGCTCGGCCGCGGGCACCACGCCCCGAGGAATACTTGGAGCAAGC 206
                       ** * * *   *   * * ** *  *** * *  ***    * **        *** **

consensus_5274#0      T---AGGTTTGGGAAGCTCGATGGATG----AGCCTGAGCCTTTCCTCATCGATACCCTG 749
consensus_5274#2      T---AGGTTTGGGAAGCTCGATGGATG----AGCCTGAGCCTTTCCTCATCGATACCCTG 237
consensus_5274#1      CTGAAAAAGTGAGAGGATTGGAAAATGTTCAAGTCCGAGCTGTATCTGCTTGTGGGGTTG 266
                          *    ** ** * * *    ***    ** * ****  *  **  * *      **

consensus_5274#0      GA--AGGAGCAG--AGGTTTCACAGGTTGCTGCTGGGATGGACCATACTCTTCTATTGGT 805
consensus_5274#2      GA--AGGAGCAG--AGGTTTCACAGGTTGCTGCTGGGATGGACCATACTCTTCTATTGGT 293
consensus_5274#1      TTTCAGCAGCAATTGGGTGTGATGGCTCTTTATGGGTTTGGGGGAGATCAAAGCGTGGCC 326
                          ** ****    *** * *  * *   *   **  ***   * *        * *  

consensus_5274#0      TGCTGAG--TAGGCTGGGGTTTTCTTCA--CCACCGAAAGTCCTTTGATTCTTGCCGTTG 861
consensus_5274#2      TGCTGAG--TAGGCCGGGGTTTTCTTCA--CCACCGAAAGTCCTTTGATTCTTGCCGTTG 349
consensus_5274#1      AACTTGGGCTTGGAAAGGACATTGTAGAGGCTGCAGTACCTTCTAGAGTGGAAGCACTTG 386
                        **  *  * **   **   ** *  *  *  * * *  * **    *    **  ***

consensus_5274#0      TCAGTGGAGAGGTTGTCATTGT-CCATCTA-CTGGATACGATCTTTAAAACAAACAGGCG 919
consensus_5274#2      TCAGTGGAGAGGTTGTCATTGT-CCATCTA-CTGGATACGATCTTTAAAACAAACAGGCG 407
consensus_5274#1      CTAATTATGATATTGTCAAGGTATCATTTGGTTGGGGACATGCTATGGCATTGACAAAGG 446
                        * *   **  ******  **  *** *   ***  **   ** *   *   ***   *

consensus_5274#0      ATG-----TTACTCGAT-----ATGCTTGGAACCATGAAATTCAGATGTGTTTCTTCCAG 969
consensus_5274#2      ATG-----TTACTCGAT-----ATGCTTGGAACCATGAAATTCAGATGTGTTTCTTCCAG 457
consensus_5274#1      ATGGAGGGTTACTTGGCTGGGGATATTCAGAAAACGGAAGGTTAGGAGAAATTGGCCATA 506
                      ***     ***** *       **  *  ***    ***  * **  *   **   *   

consensus_5274#0      CTAGTTTGACATCACATTCCCCTTGAAAGAGTTAACAGAATGAAGATAGCAAAAGCTAGT 1029
consensus_5274#2      CTAGTTTGACATCACATTCCCCCTGAAAGAGTTAACAGAATGAAGATAGCAAAAGCTAGT 517
consensus_5274#1      TTACTCAGGCTTC---TTCTGCC--AAAGAATTACTTGGAAAAACA-GTTGACAAGTACT 560
                       ** *  * * **   ***  *   ***** ***   * *  ** *     * *  ** *

consensus_5274#0      CAGACGCCAGTGCCAGTGTGCATTCTCAAACCTCCTCTTATAGAGCATCTTTGTGTGTGA 1089
consensus_5274#2      CAGACGCCAGTGCCAGTGTGCATTCTCAAACCTCCTCTTATAGAGCATCTTTGTGTGTGA 577
consensus_5274#1      CTAGC-TCAATGCTAGAGGCCGTTGAAAAGATGGTTG----AGGAAAAAATAAGGAGTGA 615
                      *   *  ** *** ** *  * **   **      *     **   *   *   * ****

consensus_5274#0      AAAGTTCATTTTCTTCCATCTGTAGTTGTAGACTCGGTACTTA--TGTTCTATGCCAAAG 1147
consensus_5274#2      AAAGTTCATTTTCTTCCATCTGTAGTTGTAGACTCGGTACTTA--TGTTCTATGCCAAAG 635
consensus_5274#1      AGACAATATGCCCATC-ATCTGGGAACCTTCGCTTGTTCATGAAGTGTGTCATGTTGAGG 674
                      * *    **   * ** *****      *   ** * *  * *  ***   ***   * *

consensus_5274#0      CTTACCCTATTCCCTGGGATTTGAGGTCTTTGAAAACTCAAAACTCCTTGTAATAA-GTT 1206
consensus_5274#2      CTTACCCTATTCCCTGGGATTTGAGGTCTTTGAAAACTCAAAACTCCTTGTAATAA-GNT 694
consensus_5274#1      TGTCTGATGTGTCATGTGGGCTCGATCATTCTCTGGTTCTCTGCTC-TGATGGCATCGTA 733
                        *    * *  * ** *   *      **       **    *** *  *   *  *  

consensus_5274#0      TTGTGTGGTGAACAATATCCTCCGGCAAAATCTTGGTGAAATTTTC 1252
consensus_5274#2      TTGNGTGGTGAACAATATCCTCCAGTAGAATCTTGGTGAAATTTT- 739
consensus_5274#1      CTGAGCGGTGGAGACAACACTTACGGACAG-CTTGGCNA------- 771
                       ** * **** * *  *  **   * * *  *****  *       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)