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Oryza sativa
cluster # 5277 cluster # 5277       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5277#0 length = 1913 sequences # 2  
consensus_5277#1 length = 1574 sequences # 1  

consensusID : consensus_5277#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1913
fasta sequence
                              [TCCTCCTCGCGACGACGCCTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCCGCCGCGAACGCCCACCGCCCGCGCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCTGATCTGCTCTGGGGGTGGGTGGGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGATCGGCTCGGGGAGAGCGAGTGAGAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGCGGAGAGATGGCGGATTTCCGGACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAACGATCTGATGGATAGATGGGGGGCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTATGGAACGACGCGGTTGAAGGTGGACCCTGTTGATGGGTCGCTGTCGTACCCGGAACCTGCGCCTGATCATGTTGTAGGGAGCTCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTGATGCGGGTATTTTATGAGCAAAAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCACAAAATCCAGGCTACCGCAATAATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATGGAACATCACCCAAAGCATATTATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAAAATCATGTTTCTGCTGAGGAACTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTAAATAACGAGATGATTGTTCTCAAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTATCGATCTATCGAAGGATTTGTTGATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAGCACCAACGGTTGCAGGATTTACGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTGACTGACGCTCCTCTTCTCTACACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCCAATGATATGCACAAGATCCTTAATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAACATTCTGATTGTCCAATCGAACAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTTGAGCAGCTTAAAATACCTACTCCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCATTGTTTGGATCCAAGCTCACAGGATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAATCAAAAAGGGCAGCTAATGAAGCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCACCGTGTAAGAATCAGTTCTTTAGTTTGTTGTGGCTCCAATTGATCAAAAGAGCTACTTTCCTGAGCAGGTGAGGTTCCGTTTTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAATACCCATGACCTCGCCTTCTTGTAATCTTGTGTGCCTGGAAGCCCTAGCAAACTCCTCGTTGCAATGGCTACTGTACTTTTTTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGCAGCATACATCGGATGATTGCCTCCATATACGAAAATGACAGCTAACTCAGACTTTTTTCGGTTGCATTTTTCTGTTTACAATTCTCACTATTATTAACGTATCTGATTGACTTGCTACAAAGGGCCTAGGTTCCAAATTGACAATTTTGCAAGTTTTCAGCCATAGCAGAGGGTTTACAGCTCCAAGCTATAAAGGTTGAAGAAAAGGTAAATTAATTCAACAGAGAACATCAGCTGACGAGCACGATTGTACAGCTCATCCTATGTCTGCAATTTTTGCTCTCATCGGTTACTAAACCGAGTATGAGAGCATTTGTCATTTGTTTTGTTCCATGTGTTTACAGTTGACACAAATAGAAGTCGTCCTTGCTCAGACAAGGTTGTACGTAAGTGCAATATAATATAAAGTACTC]

[+] EMBL AK105468             [TCCTCCTCGCGACGACGCCTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCCGCCGCGAACGCCCACCGCCCGCGCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCTGATCTGCTCTGGGGGTGGGTGGGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGATCGGCTCGGGGAGAGCGAGTGAGAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGCGGAGAGATGGCGGATTTCCGGACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAACGATCTGATGGATAGATGGGGGGCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTATGGAACGACGCGGTTGAAGGTGGACCCTGTTGATGGGTCGCTGTCGTACCCGGAACCTGCGCCTGATCATGTTGTAGGGAGCTCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTGATGCGGGTATTTTATGAGCAAAAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCACAAAATCCAGGCTACCGCAATAATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATGGAACATCACCCAAAGCATATTATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAAAATCATGTTTCTGCTGAGGAACTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTAAATAACGAGATGATTGTTCTCAAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTATCGATCTATCGAAGGATTTGTTGATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAGCACCAACGGTTGCAGGATTTACGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTGACTGACGCTCCTCTTCTCTACACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCCAATGATATGCACAAGATCCTTAATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAACATTCTGATTGTCCAATCGAACAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTTGAGCAGCTTAAAATACCTACTCCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCATTGTTTGGATCCAAGCTCACAGGATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAATCAAAAAGGGCAGCTAATGAAGCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCACCGTGTAAGAATCAGTTCTTTAGTTTGTTGTGGCTCCAATTGATCAAAAGAGCTACTTTCCTGAGCAGGTGAGGTTCCGTTTTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAATACCCATGACCTCGCCTTCTTGTAATCTTGTGTGCCTGGAAGCCCTAGCAAACTCCTCGTTGCAATGGCTACTGTACTTTTTTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGCAGCATACATCGGATGATTGCCTCCATATACGAAAATGACAGCTAACTCAGACTTTTTTCGGTTGCATTTTTCTGTTTACAATTCTCACTATTATTAACGTATCTGATT                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK101854             [ CCTCCTCGCGACGACGCCTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCCGCCGCGAACGCCCACCGCCCGCGCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCTGATCTGCTCTGGGGGTGGGTGGGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGATCGGCTCGGGGAGAGCGAGTGAGAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGCGGAGAGATGGCGGATTTCCGGACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAACGATCTGATGGATAGATGGGGGGCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTATGGAACGACGCGGTTGAAGGTGGACCCTGTTGATGGGTCGCTGTCGTACCCGGAACCTGCGCCTGATCATGTTGTAGGGAGCTCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTGATGCGGGTATTTTATGAGCAAAAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCACAAAATCCAGGCTACCGCAATAATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATGGAACATCACCCAAAGCATATTATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAAAATCATGTTTCTGCTGAGGAACTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTAAATAACGAGATGATTGTTCTCAAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTATCGATCTATCGAAGGATTTGTTGATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAGCACCAACGGTTGCAGGATTTACGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTGACTGACGCTCCTCTTCTCTACACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCCAATGATATGCACAAGATCCTTAATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAACATTCTGATTGTCCAATCGAACAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTTGAGCAGCTTAAAATACCTACTCCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCATTGTTTGGATCCAAGCTCACAGGATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAATCAAAAAGGGCAGCTAATGAAGCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCACCGTGTAAGAATCAGTTCTTTAGTTTGTTGTGGCTCCAGTTGATCAAAAGAGCTACTTTCCTGAGCAGGTGAGGTTCCGTTTTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAATACCCATGACCTCGCCTTCTTGTAATCTTGTGTGCCTGGAAGCCCTAGCAAACTCCTCGTTGCAATGGCTACTGTACTTTTTTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGCAGCATACATCGGATGATTGCCTCCATATACGAAAATGACAGCTAACTCAGACTTTTTTCGGTTGCATTTTTCTGTTTACAATTCTCACTATTATTAACGTATCTGATTGACTTGCTACAAAGGGCCTAGGTTCCAAATTGACAATTTTGCAAGTTTTCAGCCATAGCAGAGGGTTTACAGCTCCAAGCTATAAAGGTTGAAGAAAAGGTAAATTAATTCAACAGAGAACATCAGCTGACGAGCACGATTGTACAGCTCATCCTATGTCTGCAATTTTTGCTCTCATCGGTTACTAAACCGAGTATGAGAGCATTTGTCATTTGTTTTGTTCCATGTGTTTACAGTTGACACAAATAGAAGTCGTCCTTGCTCAGACAAGGTTGTACGTAAGTGCAATATAATATAAAGTACTC]


>consensus_5277#0 TCCTCCTCGCGACGACGCCTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCCG CCGCGAACGCCCACCGCCCGCGCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCT GATCTGCTCTGGGGGTGGGTGGGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGAT CGGCTCGGGGAGAGCGAGTGAGAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGC GGAGAGATGGCGGATTTCCGGACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAAC GATCTGATGGATAGATGGGGGGCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTAT GGAACGACGCGGTTGAAGGTGGACCCTGTTGATGGGTCGCTGTCGTACCCGGAACCTGCG CCTGATCATGTTGTAGGGAGCTCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTG ATGCGGGTATTTTATGAGCAAAAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCAC AAAATCCAGGCTACCGCAATAATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATG GAACATCACCCAAAGCATATTATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAA AATCATGTTTCTGCTGAGGAACTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTA AATAACGAGATGATTGTTCTCAAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTAT CGATCTATCGAAGGATTTGTTGATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAG CACCAACGGTTGCAGGATTTACGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTG ACTGACGCTCCTCTTCTCTACACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCC AATGATATGCACAAGATCCTTAATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAA CATTCTGATTGTCCAATCGAACAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTT GAGCAGCTTAAAATACCTACTCCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCAT TGTTTGGATCCAAGCTCACAGGATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAA TCAAAAAGGGCAGCTAATGAAGCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCA CCGTGTAAGAATCAGTTCTTTAGTTTGTTGTGGCTCCAATTGATCAAAAGAGCTACTTTC CTGAGCAGGTGAGGTTCCGTTTTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAA TACCCATGACCTCGCCTTCTTGTAATCTTGTGTGCCTGGAAGCCCTAGCAAACTCCTCGT TGCAATGGCTACTGTACTTTTTTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGC AGCATACATCGGATGATTGCCTCCATATACGAAAATGACAGCTAACTCAGACTTTTTTCG GTTGCATTTTTCTGTTTACAATTCTCACTATTATTAACGTATCTGATTGACTTGCTACAA AGGGCCTAGGTTCCAAATTGACAATTTTGCAAGTTTTCAGCCATAGCAGAGGGTTTACAG CTCCAAGCTATAAAGGTTGAAGAAAAGGTAAATTAATTCAACAGAGAACATCAGCTGACG AGCACGATTGTACAGCTCATCCTATGTCTGCAATTTTTGCTCTCATCGGTTACTAAACCG AGTATGAGAGCATTTGTCATTTGTTTTGTTCCATGTGTTTACAGTTGACACAAATAGAAG TCGTCCTTGCTCAGACAAGGTTGTACGTAAGTGCAATATAATATAAAGTACTC



consensusID : consensus_5277#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1574
fasta sequence
                              [CTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCCGCGAACGCCCACCGCCCGCGCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCTGATCTGCTCTGGGGGTGGGTGGGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGATCGGCTCGGGGAGAGCGAGTGAGAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGCGGAGAGATGGCGGATTTCCGGACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAACGATCTGATGGATAGATGGGGGGCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTATGGAACGACGCGGTTGAAGGTGGACCCTGTTGATGGGTCGCTGTCATACCCGGAACCTGCGCCTGATCATGTTGTAGGGAGCTCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTGATGCGGGTATTTTATGAGCAAAAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCACAAAATCCAGGCTACCGCAATAATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATGGAACATCACCCAAAGCATATTATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAAAATCATGTTTCTGCTGAGGAACTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTAAATAACGAGATGATTGTTCTCAAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTATCGATCTATCGAAGGATTTGTTGATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAGCACCAACGGTTGCAGGATTTACGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTGACTGACGCTCCTCTTCTCTACACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCCAATGATATGCACAAGATCCTTAATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAACATTCTGATTGTCCAATCGAACAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTTGAGCAGCTTAAAATACCTACTCCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCATTGTTTGGATCCAAGCTCACAGGATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAATCAAAAAGGGCAGCTAATGAAGCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCACCGTGTAAGAATCAGTTCTTTAGTTTGTTGTGGCTCCAATTGATCAAAAGAGCTACTTTCCTGAGCAGGTGAGGTTCCGTTTTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAATACCCATGACCTCGCCTTCTTGTAATCTTGTATGCCTGGAAGCCCTAGCAAACTCCTCGTTGCAATGGCTACTGTACTTTTTTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGCAGCATACATCGGATGATTGCCTCCATATACGAAAATGACAGCTAACTCAGACTTTTGTCGGTTGCATTTTTCTGTTTAAAAAAAAAAAAAAAAAA]

[+] EMBL AB038234             [CTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCCGCGAACGCCCACCGCCCGCGCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCTGATCTGCTCTGGGGGTGGGTGGGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGATCGGCTCGGGGAGAGCGAGTGAGAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGCGGAGAGATGGCGGATTTCCGGACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAACGATCTGATGGATAGATGGGGGGCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTATGGAACGACGCGGTTGAAGGTGGACCCTGTTGATGGGTCGCTGTCATACCCGGAACCTGCGCCTGATCATGTTGTAGGGAGCTCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTGATGCGGGTATTTTATGAGCAAAAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCACAAAATCCAGGCTACCGCAATAATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATGGAACATCACCCAAAGCATATTATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAAAATCATGTTTCTGCTGAGGAACTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTAAATAACGAGATGATTGTTCTCAAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTATCGATCTATCGAAGGATTTGTTGATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAGCACCAACGGTTGCAGGATTTACGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTGACTGACGCTCCTCTTCTCTACACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCCAATGATATGCACAAGATCCTTAATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAACATTCTGATTGTCCAATCGAACAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTTGAGCAGCTTAAAATACCTACTCCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCATTGTTTGGATCCAAGCTCACAGGATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAATCAAAAAGGGCAGCTAATGAAGCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCACCGTGTAAGAATCAGTTCTTTAGTTTGTTGTGGCTCCAATTGATCAAAAGAGCTACTTTCCTGAGCAGGTGAGGTTCCGTTTTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAATACCCATGACCTCGCCTTCTTGTAATCTTGTATGCCTGGAAGCCCTAGCAAACTCCTCGTTGCAATGGCTACTGTACTTTTTTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGCAGCATACATCGGATGATTGCCTCCATATACGAAAATGACAGCTAACTCAGACTTTTGTCGGTTGCATTTTTCTGTTTAAAAAAAAAAAAAAAAAA]


>consensus_5277#1 CTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCCGCGAACGCCCACCGCCCGC GCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCTGATCTGCTCTGGGGGTGGGTG GGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGATCGGCTCGGGGAGAGCGAGTGA GAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGCGGAGAGATGGCGGATTTCCGG ACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAACGATCTGATGGATAGATGGGGG GCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTATGGAACGACGCGGTTGAAGGTG GACCCTGTTGATGGGTCGCTGTCATACCCGGAACCTGCGCCTGATCATGTTGTAGGGAGC TCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTGATGCGGGTATTTTATGAGCAA AAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCACAAAATCCAGGCTACCGCAATA ATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATGGAACATCACCCAAAGCATATT ATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAAAATCATGTTTCTGCTGAGGAA CTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTAAATAACGAGATGATTGTTCTC AAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTATCGATCTATCGAAGGATTTGTT GATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAGCACCAACGGTTGCAGGATTTA CGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTGACTGACGCTCCTCTTCTCTAC ACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCCAATGATATGCACAAGATCCTT AATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAACATTCTGATTGTCCAATCGAA CAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTTGAGCAGCTTAAAATACCTACT CCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCATTGTTTGGATCCAAGCTCACAG GATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAATCAAAAAGGGCAGCTAATGAA GCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCACCGTGTAAGAATCAGTTCTTT AGTTTGTTGTGGCTCCAATTGATCAAAAGAGCTACTTTCCTGAGCAGGTGAGGTTCCGTT TTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAATACCCATGACCTCGCCTTCTT GTAATCTTGTATGCCTGGAAGCCCTAGCAAACTCCTCGTTGCAATGGCTACTGTACTTTT TTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGCAGCATACATCGGATGATTGCC TCCATATACGAAAATGACAGCTAACTCAGACTTTTGTCGGTTGCATTTTTCTGTTTAAAA AAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5277#0      TCCTCCTCGCGACGACGCCTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCCG 60
consensus_5277#1      ------------------CTCCCTCGTACGCCGGCGCTCTCGCAGTTGCCGCCGCCGCC- 41
                                        ***************************************** 

consensus_5277#0      CCGCGAACGCCCACCGCCCGCGCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCT 120
consensus_5277#1      --GCGAACGCCCACCGCCCGCGCTCTGGTCGGTGGATCGTGACGTGCTGTGGTGGTCTCT 99
                        **********************************************************

consensus_5277#0      GATCTGCTCTGGGGGTGGGTGGGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGAT 180
consensus_5277#1      GATCTGCTCTGGGGGTGGGTGGGCGTCTCGCGGAGTCGCCGTGTTCGTCGAGGGCTCGAT 159
                      ************************************************************

consensus_5277#0      CGGCTCGGGGAGAGCGAGTGAGAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGC 240
consensus_5277#1      CGGCTCGGGGAGAGCGAGTGAGAAGAGGTGAGGGTTGGGGGGAGGCACATCCGCGGCGGC 219
                      ************************************************************

consensus_5277#0      GGAGAGATGGCGGATTTCCGGACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAAC 300
consensus_5277#1      GGAGAGATGGCGGATTTCCGGACCTCCACGCATCGGGAGAGGTGGATCTTCCAGACGAAC 279
                      ************************************************************

consensus_5277#0      GATCTGATGGATAGATGGGGGGCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTAT 360
consensus_5277#1      GATCTGATGGATAGATGGGGGGCGGCGAACCAGCGGGCCACGGAGACGCTCGTTCAGTAT 339
                      ************************************************************

consensus_5277#0      GGAACGACGCGGTTGAAGGTGGACCCTGTTGATGGGTCGCTGTCGTACCCGGAACCTGCG 420
consensus_5277#1      GGAACGACGCGGTTGAAGGTGGACCCTGTTGATGGGTCGCTGTCATACCCGGAACCTGCG 399
                      ******************************************** ***************

consensus_5277#0      CCTGATCATGTTGTAGGGAGCTCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTG 480
consensus_5277#1      CCTGATCATGTTGTAGGGAGCTCAGGTGTAAAGCCTCTGTCTTGTGAAGAGGAGCGATTG 459
                      ************************************************************

consensus_5277#0      ATGCGGGTATTTTATGAGCAAAAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCAC 540
consensus_5277#1      ATGCGGGTATTTTATGAGCAAAAGATTCAAGAAGTATGTTCAGCATTTAAGTTCCCTCAC 519
                      ************************************************************

consensus_5277#0      AAAATCCAGGCTACCGCAATAATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATG 600
consensus_5277#1      AAAATCCAGGCTACCGCAATAATATATTTCAAGAGATTTTATCTGCAATGGTCTGTAATG 579
                      ************************************************************

consensus_5277#0      GAACATCACCCAAAGCATATTATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAA 660
consensus_5277#1      GAACATCACCCAAAGCATATTATGTTAACTTGTATTTATTCTTCTTGCAAAGTGGAAGAA 639
                      ************************************************************

consensus_5277#0      AATCATGTTTCTGCTGAGGAACTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTA 720
consensus_5277#1      AATCATGTTTCTGCTGAGGAACTTGGTAAAGGAATTCAACAGGACCACCAGATTATTCTA 699
                      ************************************************************

consensus_5277#0      AATAACGAGATGATTGTTCTCAAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTAT 780
consensus_5277#1      AATAACGAGATGATTGTTCTCAAATCTTTAGATTTTGATCTGATTGTTTATGCTCCGTAT 759
                      ************************************************************

consensus_5277#0      CGATCTATCGAAGGATTTGTTGATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAG 840
consensus_5277#1      CGATCTATCGAAGGATTTGTTGATGACATGGAGGATTTCTGCAGAGCAGGTAATGGTGAG 819
                      ************************************************************

consensus_5277#0      CACCAACGGTTGCAGGATTTACGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTG 900
consensus_5277#1      CACCAACGGTTGCAGGATTTACGTCAAACTGCGATATCTCAGGTTGACAAAATGATGTTG 879
                      ************************************************************

consensus_5277#0      ACTGACGCTCCTCTTCTCTACACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCC 960
consensus_5277#1      ACTGACGCTCCTCTTCTCTACACTCCTGGACAGTTGGCTCTGGCTGCTTTGCACAAATCC 939
                      ************************************************************

consensus_5277#0      AATGATATGCACAAGATCCTTAATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAA 1020
consensus_5277#1      AATGATATGCACAAGATCCTTAATTTTGAAAGGTACTTGGAAAGTGTTTTTTCAAGGCAA 999
                      ************************************************************

consensus_5277#0      CATTCTGATTGTCCAATCGAACAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTT 1080
consensus_5277#1      CATTCTGATTGTCCAATCGAACAATTTGTTGGGTCAATCAATATGATCAATTATTTGGTT 1059
                      ************************************************************

consensus_5277#0      GAGCAGCTTAAAATACCTACTCCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCAT 1140
consensus_5277#1      GAGCAGCTTAAAATACCTACTCCTAAGGACATGAGGCATATTGACCGCAAGCTTAAGCAT 1119
                      ************************************************************

consensus_5277#0      TGTTTGGATCCAAGCTCACAGGATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAA 1200
consensus_5277#1      TGTTTGGATCCAAGCTCACAGGATGAGCATAAGAAGAAAGAGAAGAAGTCGAAGCACAAA 1179
                      ************************************************************

consensus_5277#0      TCAAAAAGGGCAGCTAATGAAGCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCA 1260
consensus_5277#1      TCAAAAAGGGCAGCTAATGAAGCCCAACTTGACAGCTAGAAAACATACGGTTGGGCTGCA 1239
                      ************************************************************

consensus_5277#0      CCGTGTAAGAATCAGTTCTTTAGTTTGTTGTGGCTCCAATTGATCAAAAGAGCTACTTTC 1320
consensus_5277#1      CCGTGTAAGAATCAGTTCTTTAGTTTGTTGTGGCTCCAATTGATCAAAAGAGCTACTTTC 1299
                      ************************************************************

consensus_5277#0      CTGAGCAGGTGAGGTTCCGTTTTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAA 1380
consensus_5277#1      CTGAGCAGGTGAGGTTCCGTTTTAGCCGAGGACAACCAATTTTGAGATGAAGCGAGATAA 1359
                      ************************************************************

consensus_5277#0      TACCCATGACCTCGCCTTCTTGTAATCTTGTGTGCCTGGAAGCCCTAGCAAACTCCTCGT 1440
consensus_5277#1      TACCCATGACCTCGCCTTCTTGTAATCTTGTATGCCTGGAAGCCCTAGCAAACTCCTCGT 1419
                      ******************************* ****************************

consensus_5277#0      TGCAATGGCTACTGTACTTTTTTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGC 1500
consensus_5277#1      TGCAATGGCTACTGTACTTTTTTTGGGGGGTAATTTATCCCTTGTCAAATGGGAAGAAGC 1479
                      ************************************************************

consensus_5277#0      AGCATACATCGGATGATTGCCTCCATATACGAAAATGACAGCTAACTCAGACTTTTTTCG 1560
consensus_5277#1      AGCATACATCGGATGATTGCCTCCATATACGAAAATGACAGCTAACTCAGACTTTTGTCG 1539
                      ******************************************************** ***

consensus_5277#0      GTTGCATTTTTCTGTTTACAATTCTCACTATTATTAACGTATCTGATTGACTTGCTACAA 1620
consensus_5277#1      GTTGCATTTTTCTGTTTAAAAAAAAAAAAAAAAAA------------------------- 1574
                      ****************** **     *  *  *                           

consensus_5277#0      AGGGCCTAGGTTCCAAATTGACAATTTTGCAAGTTTTCAGCCATAGCAGAGGGTTTACAG 1680
consensus_5277#1      ------------------------------------------------------------
                                                                                  

consensus_5277#0      CTCCAAGCTATAAAGGTTGAAGAAAAGGTAAATTAATTCAACAGAGAACATCAGCTGACG 1740
consensus_5277#1      ------------------------------------------------------------
                                                                                  

consensus_5277#0      AGCACGATTGTACAGCTCATCCTATGTCTGCAATTTTTGCTCTCATCGGTTACTAAACCG 1800
consensus_5277#1      ------------------------------------------------------------
                                                                                  

consensus_5277#0      AGTATGAGAGCATTTGTCATTTGTTTTGTTCCATGTGTTTACAGTTGACACAAATAGAAG 1860
consensus_5277#1      ------------------------------------------------------------
                                                                                  

consensus_5277#0      TCGTCCTTGCTCAGACAAGGTTGTACGTAAGTGCAATATAATATAAAGTACTC 1913
consensus_5277#1      -----------------------------------------------------
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)