cluster # 5284

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Oryza sativa
cluster # 5284 cluster # 5284 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5284#0 length = 701 sequences # 3

consensusID : consensus_5284#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 701
fasta sequence

                              [CAATAATGATGTCGATACCAAAACCGACGGTACCACGCAGTAACCCTGCAAAATAGCCAATAATGGGAGAGCGGAGTCTCTCCCTTTTAATTTTTCACTTCTAAAAGCAGTATGATGTCATAAAGTTAAGTGAGAATAATTAAGGGATGACTCGTCATGGCGCACTC-CACTCACACACGTCCTCACACCTGCCAGAAGATAATAATGCTCGTCGCTTGTTGTATG-TTTCGGCGTGACTGCCGGGTTTATGCTGGTAGAAGTCGTTGGTGGTTTTCTTTCTGGTTCTCTGGCATTGCTGGCCGATGCGGGTCATATGTTGACCGATACTGCCGCCCTGCTTTTCGCCCTACTCGCCGTGCAATTTTCACGTCGTCCTCCCACCATTC-GCCACACTTTCGGTTGGCTAAGACTGACCACGCTCGCGGCGTTTGTGAATGCCATAGCCCTCGTGGTAATTACCATTTTGATTGTCTGGGAGGCGATAGAACGCTTCCGCACGCCGCGTCCGGTCGAGGGCGGCATGATGATGGCAATTGCCGTGGCTGGGTTGCTGGCAAATATACTTTCTTTCTGGTTACTTCATCACGGCAGCGAAGAGAAAAACCTCAACGTACGAGCAGCGGCACTGCATGTGCTCGGGGACCTGCTGGGTTCGGTTGGGGCTATTATTGCCGCGTTGATTATTATCTGGACTGGCTGGA]

[+] EMBL CF306587             [CAATAATGATGTCGATACCAAAACCGACGGTACCACGCAGTAACCCTGCAAAATAGCCAATAATGGGAGAGCGGAGTCTCTCCCTTTTAATTTTTCACTTCTAAAAGCAGTATGATGTCATAAAGTTAAGTGAGAATAATTAAGGGATGACTCGTCATGGCGCACTCACACTCACACACGTCCTCACACCTGCCAGAAGATAATAATGCTCGTCGCTTGTTGTATGCTTTCGGCGTGACTGCCGGGTTTATGCTGGTAGAAGTCGTTGGTGGTTTTCTTTCTGGTTCTCTGGCATTGCTGGCCGATGCGGGTCATATGTTGACCGATACTGCCGCCCTGCTTTTCGCCCTACTCGCCGTGCAATTTTCACGTCGTCCTCCCACCATTCNGCCACACTTTCGGTTGGCTAAGACTGACCACGCTCGCGGCGTTTGTGAATGCCATAGCCCTCGTGGTAATTACCATTTTGATTGTCTGGGAGGCGATAGAACGCTTCCGCACGCCGCGTCCGGTCGAGGGCGGCATGATGATGGCAATTGCCGTGGCTGGGTTGCTGGCAAATATACTTTCTTTCTGGTTACTTCATCACGGCAGCGAAGAGAAAAACCTCAACGTACGAGCAGCGGCACTGCATGTGCTCGGGGACCTGCTGGGTTCGGTTGGGGCTATTATTGCCGCGTTGATTATTATCTGGACTGGCTGGA]
[+] EMBL CF339966             [                                                                                                                                                                   ACTC CACTCAC CACGTCCTCACACCTGCCAGAAGATAATAATGCTCGTCGCTTGTTGTATG TTTCGGCGTGACTGCCGGGTTTATGCTGGTAGAAGTCGTTGGTGGTTTTCTTTCTGGTTCTCTGGCATTGCTGGCCGATGCGGGTCATATGTTGACCGATACTGCCGCCCTGCTTTTCGCCCTACTCGCCGTGCAATTTTCACGTCGTCCTCCCACCATTC GCCACACTTTCGGTTGGCTAAGACTGACCACGCTCGCGGCGTTTGTGAATGCCATAGCCCTCGTGGTAATTACCATTTTGATTGTCTGGGAGGCGATAGAACGCTTCCGCACG                                                                                                                                                                                                          ]
[+] EMBL CF339817             [                                                                                                                                                                    CTC CACTCACACACGTCCTCACACCTGCCAGAAGATAATAATGCTCGTCGCTTGTTGTATG TTTCGGCGTGACTGCCGGGTTTATGCTGGTAGAAGTCGTTGGTGGTTTTCTTTCTGGTTCTCTGGCATTGCTGGCCGATGCGGGTCATATGTTGACCGATACTGCCGCCCTGCTTTTCGCCCTACTCGCCGTGCAATTTTCACGTCGTCCTCCCACCATTC GCCACACTTTCGGTTGGCTAAGACTGACCACGCTCGCGGCGTTTGTGAATGCCATAGCCCTCGTGGTAATTACCATTTTGATTGTCTGGGAGGCGATAGAACGCTTCCGCACG                                                                                                                                                                                                          ]




>consensus_5284#0
CAATAATGATGTCGATACCAAAACCGACGGTACCACGCAGTAACCCTGCAAAATAGCCAA
TAATGGGAGAGCGGAGTCTCTCCCTTTTAATTTTTCACTTCTAAAAGCAGTATGATGTCA
TAAAGTTAAGTGAGAATAATTAAGGGATGACTCGTCATGGCGCACTCCACTCACACACGT
CCTCACACCTGCCAGAAGATAATAATGCTCGTCGCTTGTTGTATGTTTCGGCGTGACTGC
CGGGTTTATGCTGGTAGAAGTCGTTGGTGGTTTTCTTTCTGGTTCTCTGGCATTGCTGGC
CGATGCGGGTCATATGTTGACCGATACTGCCGCCCTGCTTTTCGCCCTACTCGCCGTGCA
ATTTTCACGTCGTCCTCCCACCATTCGCCACACTTTCGGTTGGCTAAGACTGACCACGCT
CGCGGCGTTTGTGAATGCCATAGCCCTCGTGGTAATTACCATTTTGATTGTCTGGGAGGC
GATAGAACGCTTCCGCACGCCGCGTCCGGTCGAGGGCGGCATGATGATGGCAATTGCCGT
GGCTGGGTTGCTGGCAAATATACTTTCTTTCTGGTTACTTCATCACGGCAGCGAAGAGAA
AAACCTCAACGTACGAGCAGCGGCACTGCATGTGCTCGGGGACCTGCTGGGTTCGGTTGG
GGCTATTATTGCCGCGTTGATTATTATCTGGACTGGCTGGA

clustalw multiple alignements is not computed in this case