cluster # 5287

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Oryza sativa
cluster # 5287 cluster # 5287 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5287#0 length = 321 sequences # 3

consensusID : consensus_5287#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 321
fasta sequence

                              [AGCTCCGGCAGTNCTCCCTGGTTGGGCTCTTCTCCAACCTCAAGGACTCACTCACCAGCCAGTTCAGCATCTTCTTCTAGCTCCAGCATGTTCTTCNAGCTTTTTCGAGCTCGCATNTCTCTTCGGCCATCTTGGTGTATATGTCAGTTTCGTGTTAAGGTANTAATGTTATCTATTTATATATAGTCCAGTGGTTGCTGTTTGTAAAGAAAAAAAAGACGACAAATTTTGTAAATCAGCTCTCTGTGTATGTACCTGGTTTTATATGAGACGATATATCAGTTAGGGCGTGTTCTAACGGAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU032036             [AGCTCCGGCAGTNCTCCCTGGTTGGGCTCTTCTCCAACCTCAAGGACTCACTCACCAGCCAGTTCAGCATCTTCTTCTAGCTCCAGCATGTTCTTCNAGCTTTTTCGAGCTCGCATNTCTCTTCGGCCATCTTGGTGTATATGTCAGTTTCGTGTTAAGGTANTAATGTTATCTATTTATATATAGTCCAGTGGTTGCTGTTTGTAAAGAAAAAAAAGACGACAAATTTTGTAAATCAGCTCTCTGTGTATGTACCTGGTTTTATATGAGACGATATATCAGTTAGGGCGTGTTCTAACGGAAAAAA              ]
[+] EMBL CF291557             [                                                                                                                                                                                                                               AAATTTTGTAAATCAGCTCTCTGTGTATGTACCTGGTTTTATATGAGACGATATATCAGTTAGGGCGTGTTCTAACGGAAAAAAAAAAAAAAAAAAA ]
[-] EMBL CF291556             [                                                                                                                                                                                                                                AATTTTGTAAATCAGCTCTCTGTGTATGGACCTGGTTTTATATGAGACGATATATCAGTTAGGGGGTGTTTTAACGGAAAAAAAAAAAAAAAAAAAA]




>consensus_5287#0
AGCTCCGGCAGTNCTCCCTGGTTGGGCTCTTCTCCAACCTCAAGGACTCACTCACCAGCC
AGTTCAGCATCTTCTTCTAGCTCCAGCATGTTCTTCNAGCTTTTTCGAGCTCGCATNTCT
CTTCGGCCATCTTGGTGTATATGTCAGTTTCGTGTTAAGGTANTAATGTTATCTATTTAT
ATATAGTCCAGTGGTTGCTGTTTGTAAAGAAAAAAAAGACGACAAATTTTGTAAATCAGC
TCTCTGTGTATGTACCTGGTTTTATATGAGACGATATATCAGTTAGGGCGTGTTCTAACG
GAAAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case