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Oryza sativa
cluster # 5292 cluster # 5292       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5292#0 length = 794 sequences # 3  

consensusID : consensus_5292#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 794
fasta sequence
                              [AACATGATGTGTCCTTGATGTCCTTCCTCCTATTGTGTTGATGCTTGCCCAAAAAAGAACTGCAGCAAACAATATTTCTTAGGTATTTACTTTTGGGAAGGTTCTAGATCATGCACCAAAGTAAGCATATTGTGCCTGTCATTTTTCTTTTTTGGGCACAATTATCATCACAAACATTGAAACAAGCTCATACCTGTGATGACATTTTTTGAGATTGGATTTTTTTTTTTTGCCAGCTATATCACTTTTTGATTGGGGGTGTAATGGTCATTCTCTTCCAATGACAAACAAGATTGACACCAAGCATGAGTAGAATCACCACTCACTCGGAAAAGTCTAGTCTTACTGCTGCATGCCAGGCCCTTTGTTACATTTCATGAGGATGTGGGCATGACCACATGAGGGAACATTTTTGGAGTGTGACCAGGCCATGGCAACATGGAGATTGGAGATGGGGTGGAGTGGGAGAAAAGATAGGAAAGGTGCACTAGCACTCTACTAGATAGATTGGGAGGAGAGTGGCAAGCAGGATGAGGAAGGTCGACTGCGCGAGGTCTGAATATCTGATTAGTATGAGATAGATTTAGAAAGATCTTTTTGTTTTTTTGTACTGGGCAGATCATACATCAATCAAAATTAGAGGTCACTACTTAATACTCCCTCCGTCCCAAAATATAGTTACTTCTGGAGTTATTTACGGAGATTAAGGACAGAGGTTGTGACATCCCGGCCCAGGGCTTAATAGGATTAATAGAATACTCATACCAACAAGTTGCTACTTCTTTTCCGGAAGC]

[+] EMBL CB624149             [AACATGATGTGTCCTTGATGTCCTTCCTCCTATTGTGTTGATGCTTGCCCAAAAAAGAACTGCAGCAAACAATATTTCTTAGGTATTTACTTTTGGGAAGGTTCTAGATCATGCACCAAAGTAAGCATATTGTGCCTGTCATTTTTCTTTTTTGGGCACAATTATCATCACAAACATTGAAACAAGCTCATACCTGTGATGACATTTTTTGAGATTGGATTTTTTTTTTTTGCCAGCTATATCACTTTTTGATTGGGGGTGTAATGGTCATTCTCTTCCAATGACAAACAAGATTGACACCAAGCATGAGTAGAATCACCACTCACTCGGAAAAGTCTAGTCTTACTGCTGCATGCCAGGCCCTTTGTTACATTTCATGAGGATGTGGGCATGACCACATGAGGGAACATTTTTGGAGTGTGACCAGGCCATGGCAACATGGAGATTGGAGATGGGGTGGAGTGGGAGAAAAGATAGGAAAGGTGCACTAGCACTCTACTAGATAGATTGGGAGGAGAGTGGCAAGCAGGATGAGGAAGGTCGACTGCGCGAGGTCTGAATATCTGATTAGTATGAGATAGATTTAGAAAGATCTTTTTGTTTTTTTGTACTGGGCAGATCATACATCAATCAAAATTAGAGGTCACTACTTAATACTCCCTCCGTCCCAAAATATAGTTACTTCTGGAGTTATTTACGGAGATTAAGGACAGAGGTTGTGACATCCCGGCCCAGGGCTTAATAGGATTAATAGAATACTCATACCAACAAGTTGCTACTTCTTTTCCGGAAGC]
[+] EMBL CB622507             [AACATGATGTGTCCTTGATGTCCTTCCTCCTATTGTGTTGATGCTTGCCCAAAAAAGAACTGCAGCAAACAATATTTCTTAGGTATTTACTTTTGGGAAGGTTCTAGATCATGCACCAAAGTAAGCATATTGTGCCTGTCATTTTTCTTTTTTGGGCACAATTATCATCACAAACATTGAAACAAGCTCATACCTGTGATGACATTTTTTGAGATTGGATTTTTTTTTTTTGCCAGCTATATCACTTTTTGATTGGGGGTGTAATGGTCATTCTCTTCCAATGACAAACAAGATTGACACCAAGCATGAGTAGAATCACCACTCACTCGGAAAAGTCTAGTCTTACTGCTGCATGCCAGGCCCTTTGTTACATTTCATGAGGATGTGGGCATGACCACATGAGGGAACATTTTTGGAGTGTGACCAGGCCATGGCAACATGGAGATTGGAGATGGGGTGGAGTGGGAGAAAAGATAGGAAAGGTGCACTAGCACTCTACTAGATAGATTGGGAGGAGAGTGGCAAGCAGGATGAGGAAGGTCGACTGCGCGAGGTCTGAATATCTGATTAGTATGAGATAGATTTAGAAAGATCTTTTTGTTTTTTTGTACTGGGCAGATCATACATCAATCAAAATTAGAGGTCACTACTTAATACTCCCTCCGTCCCAAAATATAGTTACTTCTGGAGTTATTTACGGAGATTAAGGACAGAGGTTGTGACATCCCGGCCCAGGGCTTAATAGGATTAATAGAATACTCATACCAACAAGTTGC                  ]
[+] EMBL CB625873             [AACATGATGTGTCCTTGATGTCCTTCCTCCTATTGTGTTGATGCTTGCCCAAAAAAGAACTGCAGCAAACAATATTTCTTAGGTATTTACTTTTGGGAAGGTTCTAGATCATGCACCAAAGTAAGCATATTGTGCCTGTCATTTTTCTTTTTTGGGCACAATTATCATCACAAACATTGAAACAAGCTCATACCTGTGATGACATTTTTTGAGATTGGATTTTTTTTTTTTGCCAGCTATATCACTTTTTGATTGGGGGTGTAATGGTCATTCTCTTCCAATGACAAACAAGATTGACACCAAGCATGAGTAGAATCACCACTCACTCGGAAAAGTCTAGTCTTACTGCTGCATGCCAGGCCCTTTGTTACATTTCATGAGGATGTGGGCATGACCACATGAGGGAACATTTTTGGAGTGTGACCAGGCCATGGCAACATGGAGATTGGAGATGGGGTGGAGTGGGAGAAAAGATAGGAAAGGTGCACTAGCACTCTACTAGATAGATTGGGAGGAGAGTGGCAAGCAGGATGAGGAAGGTCGACTGCGCGAGGTCTGAATATCTGATTAGTATGAGATAGATTTAGAAAGATCTTTTTGTTTTTTTGTACTGGGCAGATCATACATCAATCAAAATTAGAGGTCACTACTTAATACTCCCTCCGTCCCAAAATATAGTTACTTCTGGAGTTATTTACGGAGATTAAGGACAGAGGTTGTGACATCCCGGC                                                               ]


>consensus_5292#0 AACATGATGTGTCCTTGATGTCCTTCCTCCTATTGTGTTGATGCTTGCCCAAAAAAGAAC TGCAGCAAACAATATTTCTTAGGTATTTACTTTTGGGAAGGTTCTAGATCATGCACCAAA GTAAGCATATTGTGCCTGTCATTTTTCTTTTTTGGGCACAATTATCATCACAAACATTGA AACAAGCTCATACCTGTGATGACATTTTTTGAGATTGGATTTTTTTTTTTTGCCAGCTAT ATCACTTTTTGATTGGGGGTGTAATGGTCATTCTCTTCCAATGACAAACAAGATTGACAC CAAGCATGAGTAGAATCACCACTCACTCGGAAAAGTCTAGTCTTACTGCTGCATGCCAGG CCCTTTGTTACATTTCATGAGGATGTGGGCATGACCACATGAGGGAACATTTTTGGAGTG TGACCAGGCCATGGCAACATGGAGATTGGAGATGGGGTGGAGTGGGAGAAAAGATAGGAA AGGTGCACTAGCACTCTACTAGATAGATTGGGAGGAGAGTGGCAAGCAGGATGAGGAAGG TCGACTGCGCGAGGTCTGAATATCTGATTAGTATGAGATAGATTTAGAAAGATCTTTTTG TTTTTTTGTACTGGGCAGATCATACATCAATCAAAATTAGAGGTCACTACTTAATACTCC CTCCGTCCCAAAATATAGTTACTTCTGGAGTTATTTACGGAGATTAAGGACAGAGGTTGT GACATCCCGGCCCAGGGCTTAATAGGATTAATAGAATACTCATACCAACAAGTTGCTACT TCTTTTCCGGAAGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)