cluster # 5309

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Oryza sativa
cluster # 5309 cluster # 5309 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5309#0 length = 632 sequences # 3

consensusID : consensus_5309#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 632
fasta sequence

                              [GGCCTTCAAAAATTTTGCCCTTCAACCTCAATAGTGTCACCACGGGAACTCATTAGTAGCATGGGAATACANGAAAAAATGGCGAGTATCACCAGTACCAACGGTATAGTATGGTGCATTTCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTTTTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTTTTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAATTTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTTAGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACTTGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCCTCCAGGTGCCACATTATGTCTCGCTGTGGGCACATTTCCATCAGTACCATAACCAATCTTTGCAGGCTTCTGCAGTGGTCGTGGGTCAATCTTCACATCCATTTTCAGTTGTCCCACCTTGTTATTCTGGTCAGGCAGTTCAAAATGTGTTT]

[+] EMBL CB636214             [GGCCTTCAAAAATTTTGCCCTTCAACCTCAATAGTGTCACCACGGGAACTCATTAGTAGCATGGGAATACANGAAAAAATGGCGAGTATCACCAGTACCAACGGTATAGTATGGTGCATTTCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTTTTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTTTTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAATTTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTTAGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACTTGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCCTCCAGGTGCCACATTATGTCTCGCTGTGGGCACATTTCCATCAGTACCATAACCAATCTTTGCAGGCTTCTGCAGTGGTCGTGGGTCAATCTTCACATCCATTTTCAGTTGTCCCACCTTGTTATTCTGGTCAGGCAGTTCAAAATGTGTTT]
[+] EMBL CB636414             [ GCCTTCAATAGTTTTGCCCTTC ACCTCAATA TGTCACCACGGG ACTCATT GTAGCAT GGAATACA GAAAAAA GGCGAGTATCACCAGTACCAACGGTATAGTATGGTGCATTTCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTTTTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTTTTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAATTTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTTAGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACTTGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCCTCCAGGTGCCACATTATGTCTCGCTGTGGGCACATTTCCATCAGTACCATAACCAATCTTTGCAGGCTTCTGCAGTGGTCGTGGGTC                                                                 ]
[-] EMBL CA882853             [                                                                                                          TAGTATGGTGCATTTCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTTTTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTTTTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAATTTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTTAGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACTTGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCCTCCAGGTGCCACATTATGTCTCGCTGTGGGCACATT                                                                                                                    ]




>consensus_5309#0
GGCCTTCAAAAATTTTGCCCTTCAACCTCAATAGTGTCACCACGGGAACTCATTAGTAGC
ATGGGAATACANGAAAAAATGGCGAGTATCACCAGTACCAACGGTATAGTATGGTGCATT
TCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTT
TTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTT
TTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAAT
TTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTT
AGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACT
TGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCC
TCCAGGTGCCACATTATGTCTCGCTGTGGGCACATTTCCATCAGTACCATAACCAATCTT
TGCAGGCTTCTGCAGTGGTCGTGGGTCAATCTTCACATCCATTTTCAGTTGTCCCACCTT
GTTATTCTGGTCAGGCAGTTCAAAATGTGTTT

clustalw multiple alignements is not computed in this case