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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5356 cluster # 5356       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5356#0 length = 505 sequences # 3  

consensusID : consensus_5356#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 505
fasta sequence
                              [GTCCTTTGCCTCACCCGCTCATTGCAGAGAATCCAAACTCATAATCCATCAGTTTAGTTAATTGGTGTTGGACTATAGACTATAGAGATTCTGGTTGCTTGTGCCATTCTCCAACTCTGCTATATAGATGGCTTTAGGAAGACCCATACTGATTCAGAACTAATCATCTTTGGGAGAGGAGAGATACTAGCTACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTGGAGGAGAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGC-AGAGCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAAGGAGACAAAGCATCCTGTTGCCTCTGAAGCCAAGCCTCC-AGCTCCAACCATTTCCTACAGCCATTCAGAANGATGGCGACATCTGCCTTGAGGAAGTCCAGAGTTCAATCTTCCTGGCCTTGGGACANAAGGGAGATCCTCCGATAATTGCGCCCGGGNGGAA]

[+] EMBL AU030700             [GTCCTTTGCCTCACCCGCTCATTGCAGAGAATCCAAACTCATAATCCATCAGTTTAGTTAATTGGTGTTGGACTATAGACTATAGAGATTCTGGTTGCTTGTGCCATTCTCCAACTCTGCTATATAGATGGCTTTAGGAAGACCCATACTGATTCAGAACTAATCATCTTTGGGAGAGGAGAGATACTAGCTACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTGGAGGAGAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGC AGANCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAAGGAGACAAAGCATCCTGTTGCCTCTGAAGCCAAGCCTCCAAGCTCCCACCATTTCCTACAGCCATTCA                                                                                                ]
[+] EMBL AU032116             [                                                             gntngtTTGGACTATAGACTATAGAGATTCTGGTTGCTTGTGCCATNNTCCAACTCTGCTATATAGATGGCTTTAGGAAGACCCATACTGATTCAGAACTAATCATCTTTGGGAGAGGAGAGATACTAGCTACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTGGAGGAGAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGCAAGAGCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAANGAGACAAAGCATCCTGTTGCCTCTGAAGCCAAGCCTCC AGCTCCAACAATTTCCTACAGCCATTCAGAANGATGGCGACATCTGCCTTGAGGAAGTCCAGAGTTCAATCTTCCTGGCCTTGGGACANAAGGGAGATCCTCCGATAATTGCGCCCGGGNGGAA]
[+] EMBL OSU60301             [                                                                                                                                                                                               TACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTGGAG  GAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGC AGAGCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAAGGAGACAAAGCATCCTGTTGCCTCTGAAGCCAAGCCTCC AACTCCAA CATTTCCTACAGCCATTCAGAAGGATGGCGACATCTGCCTTGA GAAGTCCAGAGTTC ATCTTCCTGGCC TGGGACA GAGGGAGATCATC                      ]


>consensus_5356#0 GTCCTTTGCCTCACCCGCTCATTGCAGAGAATCCAAACTCATAATCCATCAGTTTAGTTA ATTGGTGTTGGACTATAGACTATAGAGATTCTGGTTGCTTGTGCCATTCTCCAACTCTGC TATATAGATGGCTTTAGGAAGACCCATACTGATTCAGAACTAATCATCTTTGGGAGAGGA GAGATACTAGCTACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTG GAGGAGAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGC AGAGCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAAGGAGACAAAGCATCCTGT TGCCTCTGAAGCCAAGCCTCCAGCTCCAACCATTTCCTACAGCCATTCAGAANGATGGCG ACATCTGCCTTGAGGAAGTCCAGAGTTCAATCTTCCTGGCCTTGGGACANAAGGGAGATC CTCCGATAATTGCGCCCGGGNGGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)