cluster # 5356

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Oryza sativa
cluster # 5356 cluster # 5356 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5356#0 length = 505 sequences # 3

consensusID : consensus_5356#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 505
fasta sequence

                              [GTCCTTTGCCTCACCCGCTCATTGCAGAGAATCCAAACTCATAATCCATCAGTTTAGTTAATTGGTGTTGGACTATAGACTATAGAGATTCTGGTTGCTTGTGCCATTCTCCAACTCTGCTATATAGATGGCTTTAGGAAGACCCATACTGATTCAGAACTAATCATCTTTGGGAGAGGAGAGATACTAGCTACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTGGAGGAGAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGC-AGAGCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAAGGAGACAAAGCATCCTGTTGCCTCTGAAGCCAAGCCTCC-AGCTCCAACCATTTCCTACAGCCATTCAGAANGATGGCGACATCTGCCTTGAGGAAGTCCAGAGTTCAATCTTCCTGGCCTTGGGACANAAGGGAGATCCTCCGATAATTGCGCCCGGGNGGAA]

[+] EMBL AU030700             [GTCCTTTGCCTCACCCGCTCATTGCAGAGAATCCAAACTCATAATCCATCAGTTTAGTTAATTGGTGTTGGACTATAGACTATAGAGATTCTGGTTGCTTGTGCCATTCTCCAACTCTGCTATATAGATGGCTTTAGGAAGACCCATACTGATTCAGAACTAATCATCTTTGGGAGAGGAGAGATACTAGCTACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTGGAGGAGAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGC AGANCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAAGGAGACAAAGCATCCTGTTGCCTCTGAAGCCAAGCCTCCAAGCTCCCACCATTTCCTACAGCCATTCA                                                                                                ]
[+] EMBL AU032116             [                                                             gntngtTTGGACTATAGACTATAGAGATTCTGGTTGCTTGTGCCATNNTCCAACTCTGCTATATAGATGGCTTTAGGAAGACCCATACTGATTCAGAACTAATCATCTTTGGGAGAGGAGAGATACTAGCTACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTGGAGGAGAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGCAAGAGCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAANGAGACAAAGCATCCTGTTGCCTCTGAAGCCAAGCCTCC AGCTCCAACAATTTCCTACAGCCATTCAGAANGATGGCGACATCTGCCTTGAGGAAGTCCAGAGTTCAATCTTCCTGGCCTTGGGACANAAGGGAGATCCTCCGATAATTGCGCCCGGGNGGAA]
[+] EMBL OSU60301             [                                                                                                                                                                                               TACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTGGAG  GAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGC AGAGCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAAGGAGACAAAGCATCCTGTTGCCTCTGAAGCCAAGCCTCC AACTCCAA CATTTCCTACAGCCATTCAGAAGGATGGCGACATCTGCCTTGA GAAGTCCAGAGTTC ATCTTCCTGGCC TGGGACA GAGGGAGATCATC                      ]




>consensus_5356#0
GTCCTTTGCCTCACCCGCTCATTGCAGAGAATCCAAACTCATAATCCATCAGTTTAGTTA
ATTGGTGTTGGACTATAGACTATAGAGATTCTGGTTGCTTGTGCCATTCTCCAACTCTGC
TATATAGATGGCTTTAGGAAGACCCATACTGATTCAGAACTAATCATCTTTGGGAGAGGA
GAGATACTAGCTACACATTCAGATTCAGAGCTAACATCCGCAGTCACCATTGCTTCATTG
GAGGAGAGATCATTGGGTAGCAATGGCAGCCCACCATGGTAGCAGCAGGAAGACAAAGGC
AGAGCAGTGGCTATTCGGTGGAAGATGGAGGAGAACTGTGAAGGAGACAAAGCATCCTGT
TGCCTCTGAAGCCAAGCCTCCAGCTCCAACCATTTCCTACAGCCATTCAGAANGATGGCG
ACATCTGCCTTGAGGAAGTCCAGAGTTCAATCTTCCTGGCCTTGGGACANAAGGGAGATC
CTCCGATAATTGCGCCCGGGNGGAA

clustalw multiple alignements is not computed in this case