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Oryza sativa
cluster # 537 cluster # 537       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_537#0 length = 1096 sequences # 2  

consensusID : consensus_537#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1096
fasta sequence
                              [CCGCCATGCCTCCTTCGTCTCGCCTCCCACGCCGCTCCTCCTCCCGGTCCGCCGCCGCGCCTCCTTGCCTCCCACGCCGTGGCGGCACGCCGGGGACGCCTCGCGCTCCTCCCCCACCTCCCCTCGCGCCTTCGCTCCTTCTCCGCGAGCTCAAGAAGCTCGCAGGAAGCCATGGCGAGTCTCGCATCCGGCCCCCCATGGATGACGTCGTCACCGACGCGTCGCGGCTTCTTCCCGGACGACCTCGACAACTTCACCGCTCCACCGACGCATCGCGGCTTCTCCCCCGTGACGCCTCCTCATCTCCCCCACCAGGGCGGCGCAGAGGCAGGGAGGGGTCGGCGTGGCCAGGGGCGTGGCGGCGCTAGCCCCGCCCTGGAGCGTGGTGGACGGGCTCGGCGTCGACCTGGCCAAGGCGGAGCTTGGCGTCATGACGCGCGTGGCGGCGGAGCTCGGCGGCGGCCGGGAGGAAGGCGCACTCCTCCTTGGCGTTCTTGGCGGCGGCGTTCTTGATTTTTTTTGTGTGATTTTGTGTGACTCTTGATTTTCTTCTATGATTTTGTGTCTCTTGTGTGATTCTTCTGGTAATCGCCGTGACGATCTGTGTTCTTGATTTTGCTTGCTAATTTTGAGGATTCTCGGCGTGGGAGCAGAGGAATTGGTGGCGGGAGAGGGAAATCGGTGCGGCGGGAGTGGGTTTTGGGAGGGCAAATCGGGGATTTCGCGCTACGGTTTCGACGCGAGGGCGAGGCTACGCCGCCCACAGCGCGCGCGACCCGGGTCTTCTCCTCGCTGCGCGCCCTGGATTTCGCGAGGTTTTGCGTCGCTCACCTAGGGGACGAGGAACCTAGTTTAGGTGCGGGTCCAAGTGACACGGCGGCAAAAATCCAACGTGGCGCGACGAGGTCCCGGTCCAGCTCACCGCACTGTGAGAGACCTGAGAGCGAGTGGCGTCGGCTTCACTCAACTATAACCAATGACCGGTGGGTACCAAGTGGGCCCCACATGTCACATAGATACGAATAAAGGTTGCAGAGCAACCGCACCGCCTGCCCCTTTTCTTAGCATGGAAGTCGTACAGGTCAAGTCCAACGAA]

[+] EMBL AK108220             [CCGCCATGCCTCCTTCGTCTCGCCTCCCACGCCGCTCCTCCTCCCGGTCCGCCGCCGCGCCTCCTTGCCTCCCACGCCGTGGCGGCACGCCGGGGACGCCTCGCGCTCCTCCCCCACCTCCCCTCGCGCCTTCGCTCCTTCTCCGCGAGCTCAAGAAGCTCGCAGGAAGCCATGGCGAGTCTCGCATCCGGCCCCCCATGGATGACGTCGTCACCGACGCGTCGCGGCTTCTTCCCGGACGACCTCGACAACTTCACCGCTCCACCGACGCATCGCGGCTTCTCCCCCGTGACGCCTCCTCATCTCCCCCACCAGGGCGGCGCAGAGGCAGGGAGGGGTCGGCGTGGCCAGGGGCGTGGCGGCGCTAGCCCCGCCCTGGAGCGTGGTGGACGGGCTCGGCGTCGACCTGGCCAAGGCGGAGCTTGGCGTCATGACGCGCGTGGCGGCGGAGCTCGGCGGCGGCCGGGAGGAAGGCGCACTCCTCCTTGGCGTTCTTGGCGGCGGCGTTCTTGATTTTTTTTGTGTGATTTTGTGTGACTCTTGATTTTCTTCTATGATTTTGTGTCTCTTGTGTGATTCTTCTGGTAATCGCCGTGACGATCTGTGTTCTTGATTTTGCTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK063107             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GATTCTTCTGGTAATCGCCGTGACGATCTGTGTTCTTGATTTTGCTTGCTAATTTTGAGGATTCTCGGCGTGGGAGCAGAGGAATTGGTGGCGGGAGAGGGAAATCGGTGCGGCGGGAGTGGGTTTTGGGAGGGCAAATCGGGGATTTCGCGCTACGGTTTCGACGCGAGGGCGAGGCTACGCCGCCCACAGCGCGCGCGACCCGGGTCTTCTCCTCGCTGCGCGCCCTGGATTTCGCGAGGTTTTGCGTCGCTCACCTAGGGGACGAGGAACCTAGTTTAGGTGCGGGTCCAAGTGACACGGCGGCAAAAATCCAACGTGGCGCGACGAGGTCCCGGTCCAGCTCACCGCACTGTGAGAGACCTGAGAGCGAGTGGCGTCGGCTTCACTCAACTATAACCAATGACCGGTGGGTACCAAGTGGGCCCCACATGTCACATAGATACGAATAAAGGTTGCAGAGCAACCGCACCGCCTGCCCCTTTTCTTAGCATGGAAGTCGTACAGGTCAAGTCCAACGAA]


>consensus_537#0 CCGCCATGCCTCCTTCGTCTCGCCTCCCACGCCGCTCCTCCTCCCGGTCCGCCGCCGCGC CTCCTTGCCTCCCACGCCGTGGCGGCACGCCGGGGACGCCTCGCGCTCCTCCCCCACCTC CCCTCGCGCCTTCGCTCCTTCTCCGCGAGCTCAAGAAGCTCGCAGGAAGCCATGGCGAGT CTCGCATCCGGCCCCCCATGGATGACGTCGTCACCGACGCGTCGCGGCTTCTTCCCGGAC GACCTCGACAACTTCACCGCTCCACCGACGCATCGCGGCTTCTCCCCCGTGACGCCTCCT CATCTCCCCCACCAGGGCGGCGCAGAGGCAGGGAGGGGTCGGCGTGGCCAGGGGCGTGGC GGCGCTAGCCCCGCCCTGGAGCGTGGTGGACGGGCTCGGCGTCGACCTGGCCAAGGCGGA GCTTGGCGTCATGACGCGCGTGGCGGCGGAGCTCGGCGGCGGCCGGGAGGAAGGCGCACT CCTCCTTGGCGTTCTTGGCGGCGGCGTTCTTGATTTTTTTTGTGTGATTTTGTGTGACTC TTGATTTTCTTCTATGATTTTGTGTCTCTTGTGTGATTCTTCTGGTAATCGCCGTGACGA TCTGTGTTCTTGATTTTGCTTGCTAATTTTGAGGATTCTCGGCGTGGGAGCAGAGGAATT GGTGGCGGGAGAGGGAAATCGGTGCGGCGGGAGTGGGTTTTGGGAGGGCAAATCGGGGAT TTCGCGCTACGGTTTCGACGCGAGGGCGAGGCTACGCCGCCCACAGCGCGCGCGACCCGG GTCTTCTCCTCGCTGCGCGCCCTGGATTTCGCGAGGTTTTGCGTCGCTCACCTAGGGGAC GAGGAACCTAGTTTAGGTGCGGGTCCAAGTGACACGGCGGCAAAAATCCAACGTGGCGCG ACGAGGTCCCGGTCCAGCTCACCGCACTGTGAGAGACCTGAGAGCGAGTGGCGTCGGCTT CACTCAACTATAACCAATGACCGGTGGGTACCAAGTGGGCCCCACATGTCACATAGATAC GAATAAAGGTTGCAGAGCAACCGCACCGCCTGCCCCTTTTCTTAGCATGGAAGTCGTACA GGTCAAGTCCAACGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)