cluster # 5370

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Oryza sativa
cluster # 5370 cluster # 5370 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5370#0 length = 673 sequences # 3

consensusID : consensus_5370#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 673
fasta sequence

                              [AAGGGCGGCGAGTTCAGCGAGGCCGGCACCAGCAGCAGGACGAGCAGCACCAACAGCACTAGCAGCGGCGGCCATGGAAGCAGCAGCAGCAGCAGCATCGGAAATGGCCATGGCGGCGGCAACCCGAAGGCTCAAACAACCAGGAGCAGGAGCAGAAAGAGAATTGGGTGCTATGGTTTCTTCAAGAAAAACAAAAGCAAAAATGGAGGTGCTGAAGATTAGAACATGATGCAAATGAAGAAGTGGGCTACATCCAGGAAGAGGATATAAAGCTTCTGTAGTGATCTGCTTATACAACAAGCATCAGCATGCAAAAGGAGCTCATGCAATGATGCAAAAACACCAACTTTGCATA-CA-TAAAATC-AGTG-CAAGATGCATGAAACGATATGACACCA-GTGAAAAGTGCAATGTGCACCACTATGACT-GGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGAGGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTCTGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAATTTCTTTGGTTTTTGTTAGTTACGTACTAATTAAAAGTTAAAACAGAGATTTGTGGATGATGACGCGCCAAAAAAA]

[+] EMBL CK085217             [AAGGGCGGCGAGTTCAGCGAGGCCGGCACCAGCAGCAGGACGAGCAGCACCAACAGCACTAGCAGCGGCGGCCATGGAAGCAGCAGCAGCAGCAGCATCGGAAATGGCCATGGCGGCGGCAACCCGAAGGCTCAAACAACCAGGAGCAGGAGCAGAAAGAGAATTGGGTGCTATGGTTTCTTCAAGAAAAACAAAAGCAAAAATGGAGGTGCTGAAGATTAGAACATGATGCAAATGAAGAAGTGGGCTACATCCAGGAAGAGGATATAAAGCTTCTGTAGTGATCTGCTTATACAACAAGCATCAGCATGCAAAAGGAGCTCATGCAATGATGCAAAAACACCAACTTTGCATA CA TAAAATC AGTG CAAGATGCATGAAACGATATGACACCA GTGAAAAGTGCAATGTGCACCACTATGACT GGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGAGGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTCTGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAA                                                                            ]
[+] EMBL AU174278             [                                                                                                                                                                                                                                                 AGTGGGCTACATCCAGGAAGAGGATATAAAGCTTCTGTAGTGATCTGCTTATACAACAAGCATCAGCATGCAAAAGGAGCTCATGCAATGATGCAAAAACACCAACTTTGCATA CA TAAAATC AGTG CAAGATGCATGAAACGATATGACACCA GTGAAAAGTGCAATGTGCACCACTATGACT GGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGAGGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTCTGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAATTTCTTTGGTTTTTGTTAGTTACGTACTAATTAAAAGTTAAAACAGAGATTTGTGGATGATGACGCGCCAAAAAAA]
[+] EMBL AU097258             [                                                                                                                                                                                                                                                                                                                                                            tgGCATACCATTAAAATCAAGTGCCAAGATGCATGAAACGATATGACACCAGGTGAAAAGTGCAATGTGCACCACTATGACTGGGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGAGGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTCTGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAATTTCTTTGGTTTTTGTTAGTTACGTACTAATTAAAAGTTAAAACAGAGATTTGTGGATGATGACGCGCCAAAA   ]




>consensus_5370#0
AAGGGCGGCGAGTTCAGCGAGGCCGGCACCAGCAGCAGGACGAGCAGCACCAACAGCACT
AGCAGCGGCGGCCATGGAAGCAGCAGCAGCAGCAGCATCGGAAATGGCCATGGCGGCGGC
AACCCGAAGGCTCAAACAACCAGGAGCAGGAGCAGAAAGAGAATTGGGTGCTATGGTTTC
TTCAAGAAAAACAAAAGCAAAAATGGAGGTGCTGAAGATTAGAACATGATGCAAATGAAG
AAGTGGGCTACATCCAGGAAGAGGATATAAAGCTTCTGTAGTGATCTGCTTATACAACAA
GCATCAGCATGCAAAAGGAGCTCATGCAATGATGCAAAAACACCAACTTTGCATACATAA
AATCAGTGCAAGATGCATGAAACGATATGACACCAGTGAAAAGTGCAATGTGCACCACTA
TGACTGGCTCACACACACAGAGATTATTTAGAGAGGGAAAGGAATGCATAAAAATACAGA
GGACAAACACCCTGCATTGGCACTGAGATCTTTTATTTGCAACACATTTCCTGTACTTTC
TGAAAGTCTCACATCTCTTGTACTATTCCTCTGTCTGTACATGTCCTAATGTAATAATTT
CTTTGGTTTTTGTTAGTTACGTACTAATTAAAAGTTAAAACAGAGATTTGTGGATGATGA
CGCGCCAAAAAAA

clustalw multiple alignements is not computed in this case