cluster # 5371

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Oryza sativa
cluster # 5371 cluster # 5371 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5371#0 length = 588 sequences # 3

consensusID : consensus_5371#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 588
fasta sequence

                              [TTTCCCATTTTACGAGCGAGGCGGCGAGAAGGTTGTGCGCCGCCGCAACTTCCTTGCCGCGATCCTCGGCGATGGCGGGCGACACGCCCACAACAACGATGTCGGCGGCGGCAACGACGATGTGAGCGCGAAGGATCCTCCCCGGCGGTCCACCTCCCAGCTCTCCTCGATAGTCCAACACAAGCGGCGGCCGGATGCCAATAGCGCGGTGGAGTCGCCGCAGCCGCCGCTGGACGAGGCGCCCAACTCACCCGAAGGCAGTAGCACCAGTAGCTGGAGGTTCCCTTTCCCCTTGCCGGCAAGGCAGGCAGGCAGCACCGCCGCAGGAACACTGGCATGGGCACCAGCGGTGATGGGATCTCAGAATAGAAGAAGGCAGAGGTGTGTTTGTTTTGGGAATTTTAGTGAAGTTGCATATTATTTGTATCTTTGTTGCACTTTGTTCTATTAAGTTGTTTCGTTCTGTTTTGATTCTTTGTTGC-ATACATCGATTTTTGGTGTTGCAATCCGTATGTTCGACTATTGATTTGGTTGAAACAATTTTGATCAAGCATTGAAACATTTTTTCTCTGCTAGTGAAACTTTCAC]

[+] EMBL AK062722             [TTTCCCATTTTACGAGCGAGGCGGCGAGAAGGTTGTGCGCCGCCGCAACTTCCTTGCCGCGATCCTCGGCGATGGCGGGCGACACGCCCACAACAACGATGTCGGCGGCGGCAACGACGATGTGAGCGCGAAGGATCCTCCCCGGCGGTCCACCTCCCAGCTCTCCTCGATAGTCCAACACAAGCGGCGGCCGGATGCCAATAGCGCGGTGGAGTCGCCGCAGCCGCCGCTGGACGAGGCGCCCAACTCACCCGAAGGCAGTAGCACCAGTAGCTGGAGGTTCCCTTTCCCCTTGCCGGCAAGGCAGGCAGGCAGCACCGCCGCAGGAACACTGGCATGGGCACCAGCGGTGATGGGATCTCAGAATAGAAGAAGGCAGAGGTGTGTTTGTTTTGGGAATTTTAGTGAAGTTGCATATTATTTGTATCTTTGTTGCACTTTGTTCTATTAAGTTGTTTCGTTCTGTTTTGATTCTTTGTTGC ATACATCGATTTTTGGTGTTGCAATCCGTATGTTCGACTATTGATTTGGTTGAAACAATTTTGATCAAGCATTGAAACATTTTTTCTCTGCTAGTGAAACTTTCAC]
[+] EMBL C29125               [                                  GTGCGCCGCCGCAACTTCCTTGCCGCGATCCTCGGCGATGGCGGGCGACACGCCATCAACAACGATGTCGGCGGCGGCAACGACGATGTGAGCGCGAAGGATCCTCCCCGGCGGTCCACCTCCCAGCTCTCCTCGATAGTCCAACACAAGCGGCGGCCGGATGCCAATAGCGCGGTGGAGTCGCCGCAGCCGCCGCTGGACGAGGCGCCCAACTCACCCGAAGGCAGTAGCACCAGTAGCTGGAGGTTCCCTTTCCCCTTGCCGGCAAGGCAGGCAGGC                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU172397             [                                                                                                                      GATGTGAGCGCGAAGGATCCTCCCCGGCGGTCCACCTCCCAGCTCTCCTCGATAGTCCAACACAAGCGGCGGCCGGATGCCAATAGCGCGGTGGAGTCGCCGCANCCGCCGCTGGACGAGGCGCCCAACTCACCCGAAGGCAGTAGCNCCAGTAGCTGGAGGTTCCCTTTCCCCTTGCCGGCAAGGCAGGCAGGCAGCACCGCCGCAGGAACACTGGCATGGGCACCAGCGGTGATGGGATCTCAGAATAGAAGAAGGCAGAGGTGTGTTTGTTTTGGGAATTTTAGTGAAGTTGCATATTATTTGTATCTTTGTTGCACTTTGTTCTATTAAGTTGTTTCGTTCTGTTTTGATTCTTTGTTGCGATACATCGATTTTTGGTGTTGCAATCCGTATGTTCGACTATTGATTTGGTTGAAAAAAaaa                                             ]




>consensus_5371#0
TTTCCCATTTTACGAGCGAGGCGGCGAGAAGGTTGTGCGCCGCCGCAACTTCCTTGCCGC
GATCCTCGGCGATGGCGGGCGACACGCCCACAACAACGATGTCGGCGGCGGCAACGACGA
TGTGAGCGCGAAGGATCCTCCCCGGCGGTCCACCTCCCAGCTCTCCTCGATAGTCCAACA
CAAGCGGCGGCCGGATGCCAATAGCGCGGTGGAGTCGCCGCAGCCGCCGCTGGACGAGGC
GCCCAACTCACCCGAAGGCAGTAGCACCAGTAGCTGGAGGTTCCCTTTCCCCTTGCCGGC
AAGGCAGGCAGGCAGCACCGCCGCAGGAACACTGGCATGGGCACCAGCGGTGATGGGATC
TCAGAATAGAAGAAGGCAGAGGTGTGTTTGTTTTGGGAATTTTAGTGAAGTTGCATATTA
TTTGTATCTTTGTTGCACTTTGTTCTATTAAGTTGTTTCGTTCTGTTTTGATTCTTTGTT
GCATACATCGATTTTTGGTGTTGCAATCCGTATGTTCGACTATTGATTTGGTTGAAACAA
TTTTGATCAAGCATTGAAACATTTTTTCTCTGCTAGTGAAACTTTCAC

clustalw multiple alignements is not computed in this case