cluster # 5376

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5376 cluster # 5376 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5376#0 length = 1974 sequences # 1

consensus_5376#1 length = 844 sequences # 2

consensusID : consensus_5376#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1974
fasta sequence

                              [CGTCATTCCCGGCGCCGAATCCCCCCGAAACACACGATCCTTCCCGCGCCGCCGCTGAGGCGCCCTAACGCCGCCGTCTCCGGCCGCGCGACCACCTCCGATCACCGCCTCTCTCTCTCTCTCTCTCCACTGCTCCCCCGCGCATCGCCTCCACCATCGGGCCTACCTGCCCGCGCCGGCGCCGCCGATCAATCGCCGCCGCCGTCAGTCCTGCTCCTGCGGGCGATACCTAGCTGCTCCGGGGCGGCCATTTCCTCCGATTGCCCGCGCTGCCTCGTACCCTCTCCGCCACCGACCAGTCCCTTCCTTGAGTTCGTTGGCTGCCGTCGTTAGAAAATTATTTGGCCATGCTATTATTATTATTTTTGTTCTTAGCCACTAGTAGTACTTTTCATTCACTAAGTTTCGGTCATTGCAGTAGCTAAATCTGAATAGAAGAAAGACCAAATTGAGACAACTGGGGAAACAAGTGATCGAATCAGATCATCGATCCCTCTTTTTGGCCCAAGCTCCCGAGACGGACTATTAGTCCCTGTTCTTGGATTGACCAAGTCTGAATAGAGACAATGCAAAATGAAGCAAGCGGTGTACAGTGGTCAGAGTGTACATTTCTCTTGAACCACCATTGAGCTCCCCATATCCTTTGATGTCTCCATATCTGAAGAGTGTATAGGAATGTGAGAAAACCGGACTGCAGAGATGAATAGTACCATCCTTGATGTATTTAAGTCAAGAAATATTAATGGAGAATTTTCTGGAACTGTCATACATTTTTATTCATTCAGTTATGAGGGTAAAGATGATACATGGTATAAGGGTGAAATTTTTCCTGTCATGAGCTTGAAGACACCATTAGAGAAGGGGAAAGGAATTAGAGTTTCTATATGGACATTCCCAGCTGAGAAAGAAAAAGAATTGAAGGAAATGATTCTGGATCTATTGCCGTTGGAAAGTACCGCACTGCTGAAGCCAAGTTTTGCCGCGTACAATTCTCATATTGACCGTGCAATACTTTGTTGCACACCATGCACCTCAAATATGACTTCTTGGATCGCCAAGCAGGTTCAAATACCTTCCGATTCTTATCTCCAGGAGGATTCAAAAAACATGATACGCTCCATATTAAATCTGTCAAAGGTGATGTGGGACTTGGGCTATGCTTGTGATGGGTTAGATGACCCCCAAAGCTTTATTATGATGGATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGACAATTCTGATAGTGAAATGATGCACCGCATAAAGTTTTCAAATCTTTTAGAAAATCATCTCAGCCAAAGATGGAGTGATGTTGAAGTGGATGAATTTATCAAGCTCATGAGAAATCCTTCAGCAAGTTTGGAACATTTGCTAAATCATCCACTCTTGCTGCCCCCTGAGATTCGTATGTCCTCATACCTTAACTTGTGGATTGAGAATTTGACACCAGACCAACATAATCTGTACAACTCAATCACAAGTTATAAGGAAAAAGTACCCAATAATAAAACTTTCATGTATGGGGATACAACTCGAGAAGCTCATCGTTTTTCACGTAACACAGCATCGCACTACATAAGTCATTGGAGACGACTTATCCCGAGCAGTAATAGGACAAAAGCTCCATTCGACATGGTCGACAAAGAACTCAAGAGGTGCTTTCCAGGGTTGCCGTGTAAGATTTATGCTATGACATTAGACCCACTTTGGAACAAATGATTGGGGTGTGAGGAGTTTTCTAACATTTGCAAGTCCAATTTTTACAGTGGGAAGTGAAGTTTCTCCCCCAACGATATTCTTGTGGCTGTCGATTAGCCCTGCGATATTTTGTACTCAATCCAGAATGAAAATGTATGCACTCAATCCAGAATGAAAATGCATGTAGCATGTTGTCGTGCTCAATTGAGAATATGTAATGTAACGTCTGTTAGCAACCTGGTTCCGTGAACTTATTATAACTTGGA]

[+] EMBL AK069468             [CGTCATTCCCGGCGCCGAATCCCCCCGAAACACACGATCCTTCCCGCGCCGCCGCTGAGGCGCCCTAACGCCGCCGTCTCCGGCCGCGCGACCACCTCCGATCACCGCCTCTCTCTCTCTCTCTCTCCACTGCTCCCCCGCGCATCGCCTCCACCATCGGGCCTACCTGCCCGCGCCGGCGCCGCCGATCAATCGCCGCCGCCGTCAGTCCTGCTCCTGCGGGCGATACCTAGCTGCTCCGGGGCGGCCATTTCCTCCGATTGCCCGCGCTGCCTCGTACCCTCTCCGCCACCGACCAGTCCCTTCCTTGAGTTCGTTGGCTGCCGTCGTTAGAAAATTATTTGGCCATGCTATTATTATTATTTTTGTTCTTAGCCACTAGTAGTACTTTTCATTCACTAAGTTTCGGTCATTGCAGTAGCTAAATCTGAATAGAAGAAAGACCAAATTGAGACAACTGGGGAAACAAGTGATCGAATCAGATCATCGATCCCTCTTTTTGGCCCAAGCTCCCGAGACGGACTATTAGTCCCTGTTCTTGGATTGACCAAGTCTGAATAGAGACAATGCAAAATGAAGCAAGCGGTGTACAGTGGTCAGAGTGTACATTTCTCTTGAACCACCATTGAGCTCCCCATATCCTTTGATGTCTCCATATCTGAAGAGTGTATAGGAATGTGAGAAAACCGGACTGCAGAGATGAATAGTACCATCCTTGATGTATTTAAGTCAAGAAATATTAATGGAGAATTTTCTGGAACTGTCATACATTTTTATTCATTCAGTTATGAGGGTAAAGATGATACATGGTATAAGGGTGAAATTTTTCCTGTCATGAGCTTGAAGACACCATTAGAGAAGGGGAAAGGAATTAGAGTTTCTATATGGACATTCCCAGCTGAGAAAGAAAAAGAATTGAAGGAAATGATTCTGGATCTATTGCCGTTGGAAAGTACCGCACTGCTGAAGCCAAGTTTTGCCGCGTACAATTCTCATATTGACCGTGCAATACTTTGTTGCACACCATGCACCTCAAATATGACTTCTTGGATCGCCAAGCAGGTTCAAATACCTTCCGATTCTTATCTCCAGGAGGATTCAAAAAACATGATACGCTCCATATTAAATCTGTCAAAGGTGATGTGGGACTTGGGCTATGCTTGTGATGGGTTAGATGACCCCCAAAGCTTTATTATGATGGATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGACAATTCTGATAGTGAAATGATGCACCGCATAAAGTTTTCAAATCTTTTAGAAAATCATCTCAGCCAAAGATGGAGTGATGTTGAAGTGGATGAATTTATCAAGCTCATGAGAAATCCTTCAGCAAGTTTGGAACATTTGCTAAATCATCCACTCTTGCTGCCCCCTGAGATTCGTATGTCCTCATACCTTAACTTGTGGATTGAGAATTTGACACCAGACCAACATAATCTGTACAACTCAATCACAAGTTATAAGGAAAAAGTACCCAATAATAAAACTTTCATGTATGGGGATACAACTCGAGAAGCTCATCGTTTTTCACGTAACACAGCATCGCACTACATAAGTCATTGGAGACGACTTATCCCGAGCAGTAATAGGACAAAAGCTCCATTCGACATGGTCGACAAAGAACTCAAGAGGTGCTTTCCAGGGTTGCCGTGTAAGATTTATGCTATGACATTAGACCCACTTTGGAACAAATGATTGGGGTGTGAGGAGTTTTCTAACATTTGCAAGTCCAATTTTTACAGTGGGAAGTGAAGTTTCTCCCCCAACGATATTCTTGTGGCTGTCGATTAGCCCTGCGATATTTTGTACTCAATCCAGAATGAAAATGTATGCACTCAATCCAGAATGAAAATGCATGTAGCATGTTGTCGTGCTCAATTGAGAATATGTAATGTAACGTCTGTTAGCAACCTGGTTCCGTGAACTTATTATAACTTGGA]




>consensus_5376#0
CGTCATTCCCGGCGCCGAATCCCCCCGAAACACACGATCCTTCCCGCGCCGCCGCTGAGG
CGCCCTAACGCCGCCGTCTCCGGCCGCGCGACCACCTCCGATCACCGCCTCTCTCTCTCT
CTCTCTCCACTGCTCCCCCGCGCATCGCCTCCACCATCGGGCCTACCTGCCCGCGCCGGC
GCCGCCGATCAATCGCCGCCGCCGTCAGTCCTGCTCCTGCGGGCGATACCTAGCTGCTCC
GGGGCGGCCATTTCCTCCGATTGCCCGCGCTGCCTCGTACCCTCTCCGCCACCGACCAGT
CCCTTCCTTGAGTTCGTTGGCTGCCGTCGTTAGAAAATTATTTGGCCATGCTATTATTAT
TATTTTTGTTCTTAGCCACTAGTAGTACTTTTCATTCACTAAGTTTCGGTCATTGCAGTA
GCTAAATCTGAATAGAAGAAAGACCAAATTGAGACAACTGGGGAAACAAGTGATCGAATC
AGATCATCGATCCCTCTTTTTGGCCCAAGCTCCCGAGACGGACTATTAGTCCCTGTTCTT
GGATTGACCAAGTCTGAATAGAGACAATGCAAAATGAAGCAAGCGGTGTACAGTGGTCAG
AGTGTACATTTCTCTTGAACCACCATTGAGCTCCCCATATCCTTTGATGTCTCCATATCT
GAAGAGTGTATAGGAATGTGAGAAAACCGGACTGCAGAGATGAATAGTACCATCCTTGAT
GTATTTAAGTCAAGAAATATTAATGGAGAATTTTCTGGAACTGTCATACATTTTTATTCA
TTCAGTTATGAGGGTAAAGATGATACATGGTATAAGGGTGAAATTTTTCCTGTCATGAGC
TTGAAGACACCATTAGAGAAGGGGAAAGGAATTAGAGTTTCTATATGGACATTCCCAGCT
GAGAAAGAAAAAGAATTGAAGGAAATGATTCTGGATCTATTGCCGTTGGAAAGTACCGCA
CTGCTGAAGCCAAGTTTTGCCGCGTACAATTCTCATATTGACCGTGCAATACTTTGTTGC
ACACCATGCACCTCAAATATGACTTCTTGGATCGCCAAGCAGGTTCAAATACCTTCCGAT
TCTTATCTCCAGGAGGATTCAAAAAACATGATACGCTCCATATTAAATCTGTCAAAGGTG
ATGTGGGACTTGGGCTATGCTTGTGATGGGTTAGATGACCCCCAAAGCTTTATTATGATG
GATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGACAATTCTGATAGTGAAAT
GATGCACCGCATAAAGTTTTCAAATCTTTTAGAAAATCATCTCAGCCAAAGATGGAGTGA
TGTTGAAGTGGATGAATTTATCAAGCTCATGAGAAATCCTTCAGCAAGTTTGGAACATTT
GCTAAATCATCCACTCTTGCTGCCCCCTGAGATTCGTATGTCCTCATACCTTAACTTGTG
GATTGAGAATTTGACACCAGACCAACATAATCTGTACAACTCAATCACAAGTTATAAGGA
AAAAGTACCCAATAATAAAACTTTCATGTATGGGGATACAACTCGAGAAGCTCATCGTTT
TTCACGTAACACAGCATCGCACTACATAAGTCATTGGAGACGACTTATCCCGAGCAGTAA
TAGGACAAAAGCTCCATTCGACATGGTCGACAAAGAACTCAAGAGGTGCTTTCCAGGGTT
GCCGTGTAAGATTTATGCTATGACATTAGACCCACTTTGGAACAAATGATTGGGGTGTGA
GGAGTTTTCTAACATTTGCAAGTCCAATTTTTACAGTGGGAAGTGAAGTTTCTCCCCCAA
CGATATTCTTGTGGCTGTCGATTAGCCCTGCGATATTTTGTACTCAATCCAGAATGAAAA
TGTATGCACTCAATCCAGAATGAAAATGCATGTAGCATGTTGTCGTGCTCAATTGAGAAT
ATGTAATGTAACGTCTGTTAGCAACCTGGTTCCGTGAACTTATTATAACTTGGA

consensusID : consensus_5376#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 844
fasta sequence

                              [AAAGATTTATTATGATGGATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGACAAAATTCTAATAGTGAAATGATG-ACCG-ATAAAGTTTTCAAATCTTTTAGAAAATCATCTCAGCCAAAGATGGAATGATATTGAAGTGAATGAATTTATCAAGCTCATGAGAAATCCTTCAGCAAGTTTGGAACATTTGCTAAATCATCCACTCTTGCTGCCCCCTGAGATTCGTATGTCCTCATACCTTAACTTGTGGATTGAGAATTTGACACCAGACTAACATAATCTGTACAACTCAATCACAAGTTATGGAAAATGGACCAGTACGATAAAATCCAGCCAAGAAGTCCTTCATTCCATTCTGACATATAAGGAAAAAGTACCCAATAATAAAACTATCATGTATGTGGATACAGCTCGAGATGCTCATCGTTTTTCACGTAACACAGCATCGCACTACATAAGTCATTGGAGACGACTTATCCCGAGCAGTAATGGGACAAAAGCTCCATTCGACATGGTCGACAAAGAACTCAAGAAGTGCTTTCCAGGGTTGCTGTGTAAGATTTATGCTATGACATTAGACCCACTTTGGAACAAATGATTGAGGTGTGAGGAGTTTTCTAGCATTTGCAAGTCCAATTTTTACAGTGGGAAGNTAAGTTTCTNCCCCCAACGTGGCATTCTTGNGGCTGTCGATTAGCCCTGCGATATTTTGTACTCATCCAGAATGGAAATGTATGTACTCAATCCAGATGAAAATGCATGGCGTCGNGCTCAATGANATATGTATGNAACGTCTGGTAGCAACCTATGATCTCATTCGGNGACTCTATGCAAGA]

[+] EMBL AA751338             [AAAGATTTATTATGATGGATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGACAAAATTCTAATAGTGAAATGATG ACCG ATAAAGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA765406             [   ggggTATTATGATGGATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGACAAAATTCTGATAGTGAAATGATGCACCGCATAAAGTTTTCAAATCTTTTAGAAAATCATCTCAGCCAAAGATGGAATGATATTGAAGTGAATGAATTTATCAAGCTCATGAGAAATCCTTCAGCAAGTTTGGAACATTTGCTAAATCATCCACTCTTGCTGCCCCCTGAGATTCGTATGTCCTCATACCTTAACTTGTGGATTGAGAATTTGACACCAGACTAACATAATCTGTACAACTCAATCACAAGTTATGGAAAATGGACCAGTACGATAAAATCCAGCCAAGAAGTCCTTCATTCCATTCTGACATATAAGGAAAAAGTACCCAATAATAAAACTATCATGTATGTGGATACAGCTCGAGATGCTCATCGTTTTTCACGTAACACAGCATCGCACTACATAAGTCATTGGAGACGACTTATCCCGAGCAGTAATGGGACAAAAGCTCCATTCGACATGGTCGACAAAGAACTCAAGAAGTGCTTTCCAGGGTTGCTGTGTAAGATTTATGCTATGACATTAGACCCACTTTGGAACAAATGATTGAGGTGTGAGGAGTTTTCTAGCATTTGCAAGTCCAATTTTTACAGTGGGAAGNTAAGTTTCTNCCCCCAACGTGGCATTCTTGNGGCTGTCGATTAGCCCTGCGATATTTTGTACTCATCCAGAATGGAAATGTATGTACTCAATCCAGATGAAAATGCATGGCGTCGNGCTCAATGANATATGTATGNAACGTCTGGTAGCAACCTATGATCTCATTCGGNGACTCTATGCAAGA]




>consensus_5376#1
AAAGATTTATTATGATGGATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGAC
AAAATTCTAATAGTGAAATGATGACCGATAAAGTTTTCAAATCTTTTAGAAAATCATCTC
AGCCAAAGATGGAATGATATTGAAGTGAATGAATTTATCAAGCTCATGAGAAATCCTTCA
GCAAGTTTGGAACATTTGCTAAATCATCCACTCTTGCTGCCCCCTGAGATTCGTATGTCC
TCATACCTTAACTTGTGGATTGAGAATTTGACACCAGACTAACATAATCTGTACAACTCA
ATCACAAGTTATGGAAAATGGACCAGTACGATAAAATCCAGCCAAGAAGTCCTTCATTCC
ATTCTGACATATAAGGAAAAAGTACCCAATAATAAAACTATCATGTATGTGGATACAGCT
CGAGATGCTCATCGTTTTTCACGTAACACAGCATCGCACTACATAAGTCATTGGAGACGA
CTTATCCCGAGCAGTAATGGGACAAAAGCTCCATTCGACATGGTCGACAAAGAACTCAAG
AAGTGCTTTCCAGGGTTGCTGTGTAAGATTTATGCTATGACATTAGACCCACTTTGGAAC
AAATGATTGAGGTGTGAGGAGTTTTCTAGCATTTGCAAGTCCAATTTTTACAGTGGGAAG
NTAAGTTTCTNCCCCCAACGTGGCATTCTTGNGGCTGTCGATTAGCCCTGCGATATTTTG
TACTCATCCAGAATGGAAATGTATGTACTCAATCCAGATGAAAATGCATGGCGTCGNGCT
CAATGANATATGTATGNAACGTCTGGTAGCAACCTATGATCTCATTCGGNGACTCTATGC
AAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5376#0      CGTCATTCCCGGCGCCGAATCCCCCCGAAACACACGATCCTTCCCGCGCCGCCGCTGAGG 60
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      CGCCCTAACGCCGCCGTCTCCGGCCGCGCGACCACCTCCGATCACCGCCTCTCTCTCTCT 120
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      CTCTCTCCACTGCTCCCCCGCGCATCGCCTCCACCATCGGGCCTACCTGCCCGCGCCGGC 180
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      GCCGCCGATCAATCGCCGCCGCCGTCAGTCCTGCTCCTGCGGGCGATACCTAGCTGCTCC 240
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      GGGGCGGCCATTTCCTCCGATTGCCCGCGCTGCCTCGTACCCTCTCCGCCACCGACCAGT 300
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      CCCTTCCTTGAGTTCGTTGGCTGCCGTCGTTAGAAAATTATTTGGCCATGCTATTATTAT 360
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      TATTTTTGTTCTTAGCCACTAGTAGTACTTTTCATTCACTAAGTTTCGGTCATTGCAGTA 420
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      GCTAAATCTGAATAGAAGAAAGACCAAATTGAGACAACTGGGGAAACAAGTGATCGAATC 480
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      AGATCATCGATCCCTCTTTTTGGCCCAAGCTCCCGAGACGGACTATTAGTCCCTGTTCTT 540
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      GGATTGACCAAGTCTGAATAGAGACAATGCAAAATGAAGCAAGCGGTGTACAGTGGTCAG 600
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      AGTGTACATTTCTCTTGAACCACCATTGAGCTCCCCATATCCTTTGATGTCTCCATATCT 660
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      GAAGAGTGTATAGGAATGTGAGAAAACCGGACTGCAGAGATGAATAGTACCATCCTTGAT 720
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      GTATTTAAGTCAAGAAATATTAATGGAGAATTTTCTGGAACTGTCATACATTTTTATTCA 780
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      TTCAGTTATGAGGGTAAAGATGATACATGGTATAAGGGTGAAATTTTTCCTGTCATGAGC 840
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      TTGAAGACACCATTAGAGAAGGGGAAAGGAATTAGAGTTTCTATATGGACATTCCCAGCT 900
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      GAGAAAGAAAAAGAATTGAAGGAAATGATTCTGGATCTATTGCCGTTGGAAAGTACCGCA 960
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      CTGCTGAAGCCAAGTTTTGCCGCGTACAATTCTCATATTGACCGTGCAATACTTTGTTGC 1020
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      ACACCATGCACCTCAAATATGACTTCTTGGATCGCCAAGCAGGTTCAAATACCTTCCGAT 1080
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      TCTTATCTCCAGGAGGATTCAAAAAACATGATACGCTCCATATTAAATCTGTCAAAGGTG 1140
consensus_5376#1      ------------------------------------------------------------
                                                                                  

consensus_5376#0      ATGTGGGACTTGGGCTATGCTTGTGATGGGTTAGATGACCCCCAAAGCTTTATTATGATG 1200
consensus_5376#1      -------------------------------------------AAAGATTTATTATGATG 17
                                                                 **** ************

consensus_5376#0      GATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGACAA--TTCTGATAGTGAA 1258
consensus_5376#1      GATTCTAATGTCAAACTTCTCCCTTTTGGGATACGAAAGAGACAAAATTCTAATAGTGAA 77
                      *********************************************  **** ********

consensus_5376#0      ATGATGCACCGCATAAAGTTTTCAAATCTTTTAGAAAATCATCTCAGCCAAAGATGGAGT 1318
consensus_5376#1      ATGATG-ACCG-ATAAAGTTTTCAAATCTTTTAGAAAATCATCTCAGCCAAAGATGGAAT 135
                      ****** **** ********************************************** *

consensus_5376#0      GATGTTGAAGTGGATGAATTTATCAAGCTCATGAGAAATCCTTCAGCAAGTTTGGAACAT 1378
consensus_5376#1      GATATTGAAGTGAATGAATTTATCAAGCTCATGAGAAATCCTTCAGCAAGTTTGGAACAT 195
                      *** ******** ***********************************************

consensus_5376#0      TTGCTAAATCATCCACTCTTGCTGCCCCCTGAGATTCGTATGTCCTCATACCTTAACTTG 1438
consensus_5376#1      TTGCTAAATCATCCACTCTTGCTGCCCCCTGAGATTCGTATGTCCTCATACCTTAACTTG 255
                      ************************************************************

consensus_5376#0      TGGATTGAGAATTTGACACCAGACCAACATAATCTGTACAACTCAATCACAAGTTAT--- 1495
consensus_5376#1      TGGATTGAGAATTTGACACCAGACTAACATAATCTGTACAACTCAATCACAAGTTATGGA 315
                      ************************ ********************************   

consensus_5376#0      ---------------------------------------------------------AAG 1498
consensus_5376#1      AAATGGACCAGTACGATAAAATCCAGCCAAGAAGTCCTTCATTCCATTCTGACATATAAG 375
                                                                               ***

consensus_5376#0      GAAAAAGTACCCAATAATAAAACTTTCATGTATGGGGATACAACTCGAGAAGCTCATCGT 1558
consensus_5376#1      GAAAAAGTACCCAATAATAAAACTATCATGTATGTGGATACAGCTCGAGATGCTCATCGT 435
                      ************************ ********* ******* ******* *********

consensus_5376#0      TTTTCACGTAACACAGCATCGCACTACATAAGTCATTGGAGACGACTTATCCCGAGCAGT 1618
consensus_5376#1      TTTTCACGTAACACAGCATCGCACTACATAAGTCATTGGAGACGACTTATCCCGAGCAGT 495
                      ************************************************************

consensus_5376#0      AATAGGACAAAAGCTCCATTCGACATGGTCGACAAAGAACTCAAGAGGTGCTTTCCAGGG 1678
consensus_5376#1      AATGGGACAAAAGCTCCATTCGACATGGTCGACAAAGAACTCAAGAAGTGCTTTCCAGGG 555
                      *** ****************************************** *************

consensus_5376#0      TTGCCGTGTAAGATTTATGCTATGACATTAGACCCACTTTGGAACAAATGATTGGGGTGT 1738
consensus_5376#1      TTGCTGTGTAAGATTTATGCTATGACATTAGACCCACTTTGGAACAAATGATTGAGGTGT 615
                      **** ************************************************* *****

consensus_5376#0      GAGGAGTTTTCTAACATTTGCAAGTCCAATTTTTACAGTGGGAAGTGAAGTTTCTCCCCC 1798
consensus_5376#1      GAGGAGTTTTCTAGCATTTGCAAGTCCAATTTTTACAGTGGGAAGNTAAGTTTCTNCCCC 675
                      ************* *******************************  ******** ****

consensus_5376#0      AA---CGATATTCTTGTGGCTGTCGATTAGCCCTGCGATATTTTGTACTCAATCCAGAAT 1855
consensus_5376#1      CAACGTGGCATTCTTGNGGCTGTCGATTAGCCCTGCGATATTTTGTACTCA-TCCAGAAT 734
                       *    *  ******* ********************************** ********

consensus_5376#0      GAAAATGTATGCACTCAATCCAGAATGAAAATGCATGTAGCATGTTGTCGTGCTCAATTG 1915
consensus_5376#1      GGAAATGTATGTACTCAATCCAGA-TGAAAATGC-------ATGGCGTCGNGCTCAAT-- 784
                      * ********* ************ *********       ***  **** *******  

consensus_5376#0      AGAATATGTAATGTAACGTCTGTTAGCAACCT--GGTTCCGTGAACTTATTATAACTTGG 1973
consensus_5376#1      GANATATGTA-TGNAACGTCTGGTAGCAACCTATGATCTCATTCGGNGACTCTATGCAAG 843
                         ******* ** ******** *********  * *  * *      * * **     *

consensus_5376#0      A 1974
consensus_5376#1      A 844
                      *