These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5378#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 963 fasta sequence [ATGGGAGGTCTACGAACCCTGCTCATCTATGGTTGANAGGTTGCAATGGAGAAATGGCAACCCATCTTCAAAGGATTCCTGGGTATGATAAGTGGATGATTGAAAAGGAGGCCAAGTCTTATCTTGAAGCATTTGAAGATCGTAAAGAAAACCTTGTGTACCTTACAGCCGATGCTGAAACTGTGCTTGATGATCTAGACATGTCAAAAATATACATCATCGGTGGCCTAGTGGGCCGGAACAGATGG-AAAGGTATTACACTGAAAAAGGCGGTTGATCAGGGGATTCAATGTGCCAAGCTCCCTATTGGAAATTATTTAAAGATGTCAAGTTCTCAGGTTCTGACAGTTAACCAAGTGTTCGAGATAATGCTAAAGTTTGTGGAAACAAGGGACTGGAAGACTTCGTTCTTTCATGTGAT-CCCACAGAGGAAAAGAGGAGAAG-CTGAAGCTGAAAAT-GATGGGGTCGATATAAGCATGAACAATGTTGATGCCGCCGAAGGGGCTGAGAATCAAGGTGACCTTACCA-AGGTTTTTGATGAGGATGTAGATGATGACGATGTT-GTTGATGAAGAACTACAAGAGGAAGACACCGATATGGCTAAGAA-AAAGCAGTGTATTAGACATGAAAATGGTGAGGCAGAGGATGCCTCCACCAGGCCAGCTGAGGATCACTCTCCCGGTGCAGCAGCAGAGACGACGACACCCACCGGAGGCGCTCTCCCCCAGGCTGAGCAGAGTAAAGAAAGCA-ATGGTGCCGATGACTGAAGAAGACTGGACTGCAGGTGTATGATCACTGTTCTGTAGAACTGCTTTTCTTTAACCCGGGGTTTTAACTCGGGCGTACATTGTTTGGAGCGCTCTCTTTTCGTGTATCTCAGTCGTGTTTGACAGCCTACTCTTGTCATTGATGACTATAACAAGGTAGCCCTGAACCCGTTGCAATGCCTGCAAGCGTTTGGCC] [+] EMBL D43334 [ATGGGAGGTCTACGAACCCTGCTCATCTATGGTTGANAGGTTGCAATGGAGAAATGGCAACCCATCTTCAAAGGATTCCTGGGTATGATAAGTGGATGATTGAAAAGGAGGCCAAGTCTTATCTTGAAGCATTTGAAGATCGTAAAGAAAACCTTGTGTACCTTACAGCCGATGCTGAAACTGTGCTTGATGATCTAGACATGTCAAAAATATACATCATCGGTGGCCTAGTGGGCCGGAACAGATGGNAAAGGT ] [+] EMBL AK058341 [ GGCCAAGTCTTATCTTGAAGCATTTGAAGATCGTAAAGAAAACCTTGTGTACCTTACAGCCGATGCTGAAACTGTGCTTGATGATCTAGACATGTCAAAAATATACATCATCGGTGGCCTAGTGGACCGGAACAGATGG AAAGGTATTACACTGAAAAAGGCGGTTGATCAGGGGATTCAATGTGCCAAGCTCCCTATTGGAAATTATTTAAAGATGTCAAGTTCTCAGGTTCTGACAGTTAACCAAGTGTTCGAGATAATGCTAAAGTTTGTGGAAACAAGGGACTGGAAGACTTCGTTCTTTCATGTGAT CCCACAGAGGAAAAGAGGAGAAG CTGAAGCTGAAAAT GATGGGGTCGATATAAGCATGAACAATGTTGATGCCGCCGAAGGGGCTGAGAATCAAGGTGACCTTACCA AGGTTTTTGATGAGGATGTAGATGATGACGATGTT GTTGATGAAGAACTACAAGAGGAAGACACCGATATGGCTAAGAA AAAGCAGTGTATTAGACATGAAAATGGTGAGGCAGAGGATGCCTCCACCAGGCCAGCTGAGGATCACTCTCCCGGTGCAGCAGCAGAGACGACGACACCCACCGGAGGCGCTCTCCCCCAGGCTGAGCAGAGTAAAGAAAGCA ATGGTGCCGATGACTGAAGAAGACTGGACTGCAGGTGTATGATCACTGTTCTGTAGAACTGCTTTTCTTTAACCCGGGGTTTTAACTCGGGCGTACATTGTTTGGAGCGCTCTCTTTTCGTGTATCTCAGTCGTGTTTGACAGCCTACTCTTGTCATTGATGACTATAACAAGGTAGCCCTGAACCCGTTGCAATGCCTGCAAGCGTTTGGCC] [+] EMBL BI807281 [ ATGTGATCCCCCCAGGAGAAAAGAGGAGAAGTCTGAANCTGGAAATNGAT GGGTCGATATAAGCATGAAC ATGTTGAT CCGCCGAAGGGTCTGAGAATCAAGGTGACCTTACCATAGGTTTTTGATGAGGATGTAGATGATGACGATGTTNGTTGATGAAGAACTACAAGAGGAAGACACCGATATGGCTAAGAATAAAGCAGTGTATTAGACATGAAAATGGTGAGGCAGAGGATGCCTCCACCAGGCCAGCTGAGGATCACTCTCCCGGTGCAGCAGCAGAGACGACGACACCCACCGGAGGCGCTCTCCCCCAGGCTGAGCAGAGTAAAGAAAGCATATGGTGCCGATGACTGAAGAAGACTGGACTGCAGGTGTATGATCACTGTTCTGTAGAACTGCTTTTCTTTAACCC GGGTTTTAACTCGGGCGTACATTGTTTGGAGCGCTCTCTTTTCGTGTATCTCAGTCGTGTTTGACAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||