cluster # 5382

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Oryza sativa
cluster # 5382 cluster # 5382 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5382#0 length = 2400 sequences # 3
consensusID : consensus_5382#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2400
fasta sequence
                              [TACTCTCTCCACTTCCACTCTCACCGGCCACCGCGCGCTCTCTCTCTCTCTCTCCCCCTTCTCCCGCAAGATTCTTCCCCCAAATCCCACCCGATCCACCGCCGCCGCCCGCTCGCCGGAGTCCCATCGCTGCCACCGCCGCCGGAGCCGCGGCCCGACGCCCGCCGGGCCTGCTTGCTGTGTGTGTGAGGAGGTGGAGTTGCTCGCGCTCGTTCCCGCGGCCACCTCCGCCTGCTGCTGCTTCTGCTTCCGCTGGCATTGCGGGGAGGTCGTGTGCCGGGGGACGTGGGGGCTCGTGTTGGAGCGCGGCTGCCGGTGAGGTGGGGGGTGCGGCGCGGCGCGGCTCGCGCTTGTGCGCCGGTGGCGCGGGCGCGGGGGGAAGCGTACGGGGGAGGGGGAGTGTGGCGGCGGCGGCGCGCGGGGTAGGGACGGGCGCCGCCACCACCACCGGCTCGTTCGCTGGCAGGCGCTACGCGTCCAGATCCGTACGCCGGTTGTTGAGAAGTGAAGATGTCGACAGGTGAAACCCTGCGTGCAGAGCTATCATCCAGGACGCCGCCTTTCGGTTTGAGGCTATGGATTGTGATTGGAATCAGTATTTGGGTGGTGATCTTCTTTATACTAGGTTTCATGTGCCTCTGGTCCATATACCGAAGGAAGCCGAAGAAGTCCTTTGATAAGATTCCAGTATCTCAAATCCCGGATGTTTCCAAGGAGATTGCAGTAGATGAAGTTCGTGAGCATGCTGTTGTCGAAAACTTCCGTGTGCAAGAAAGCCACGCGATATCGGTGCAGGAGAAACATTACGAGAAAGATTCAGGGAAAATGCTGGCACACTTGGTTAGGAGTAAATCGAGTGATGCCGATAATTTGAGCCAATGCAGCTCGGTGTACCAATGTGATAGGGCTGGTAGCTCGTATTCTGGTGATGAAGGCAGCTCGGGCAATGCTAGGAGGCACTTTTCTCAATATGCAACTGTCTCAGCATCCCCTCTGGTTGGTCTCCCAGAATTCTCTCATCTGGGCTGGGGTCATTGGTTTACTCTGAGAGATTTGGAGCATGCAACAAATCGGTTTTCCAAGGAGAATGTCATTGGAGAGGGTGGATATGGGGTAGTTTACCGTGGTCGACTCATAAATGGAACTGACGTCGCAATAAAGAAGCTTCTTAATAATATGGGCCAGGCAGAAAAGGAGTTCAGGGTTGAAGTTGAGGCTATTGGCCACGTCAGGCATAAGAATCTTGTCCGCCTTCTAGGATATTGTGTTGAGGGAATCCACAGGATGCTTGTATACGAATATGTGAATAACGGGAACTTAGAACAGTGGCTTCATGGTGCCATGCGCCAACATGGTGTTCTTACCTGGGAAGCCCGAATGAAAGTTGTTCTTGGAATTGCTAAAGCGCTTGCTTATTTACATGAAGCAATAGAGCCAAAAGTTGTACACCGGGATATCAAATCAAGCAACATACTAATCGATGAAGAATTCAATGGCAAACTTTCTGATTTTGGCTTGGCTAAGATGCTGGGTGCAGGGAAGAGCCATATCACAACTCGAGTTATGGGAACTTTTGGGTATGTGGCCCCTGAGTATGCCAACACAGGTCTGTTAAACGAGAAGAGTGATGTCTACAGTTTTGGTGTGCTATTACTGGAAGCAGTGACTGGTAGAGATCCAGTTGATTATGGCCGGCCTGCTAATGAGGTGCATCTAGTGGAGTGGCTCAAAATGATGGTTGGCACAAGAAGATCTGAAGAGGTAGTTGACCCTGACATGGAGGTCAAACCGACCATTCGGGCTCTTAAGCGTGCTCTCCTAGTGGCACTGAGGTGCGTCGACCCAGACTCTGAGAAAAGACCTACTATGGGTCATGTTGTTCGGATGCTCGAGGCAGAAGATGTCCCATCCCGTGAGGACCGGAGGAGCCGGAGGGGCAACACTGCCAATGCAGATACCGAGTCCAAGACAAGCTCAAGCGAATTCGAGATAAGTGGCGATAGAAGGGACTCAGGGCCATCAGCAAGGTTTCAACCCTAAGAAGACGGTGATCATAGTCAAGAACAATGGCTTCAAAACTCTATGCAGTAACATGGTGGTTGGCAGAGAAAAAGGGGTATTTCTGGAGGGCATTGCATTTTGTATTGTAGGTCTGCATGGCGGTAGAGACTGGAGAGAGCACAGTGTCTGATGATGGATACCCGGAGACCTGTAATTCCCATTCAGTATTCTGTTTGCTAGTCAAGCAGCTTGTACAGATCGTTGTCTGTTCCATTTTTTCATTCTTCTGGTTTTTTTGTTTAGGAGGCTCTTGGATTACCAGTACGAACCGCTGTCTCTTTTCTAGAATCACCAACATGGAACCTATCAATATTTACTACTAGTACTACGACTTGCTTT]

[+] EMBL AK103003             [TACTCTCTCCACTTCCACTCTCACCGGCCACCGCGCGCTCTCTCTCTCTCTCTCCCCCTTCTCCCGCAAGATTCTTCCCCCAAATCCCACCCGATCCACCGCCGCCGCCCGCTCGCCGGAGTCCCATCGCTGCCACCGCCGCCGGAGCCGCGGCCCGACGCCCGCCGGGCCTGCTTGCTGTGTGTGTGAGGAGGTGGAGTTGCTCGCGCTCGTTCCCGCGGCCACCTCCGCCTGCTGCTGCTTCTGCTTCCGCTGGCATTGCGGGGAGGTCGTGTGCCGGGGGACGTGGGGGCTCGTGTTGGAGCGCGGCTGCCGGTGAGGTGGGGGGTGCGGCGCGGCGCGGCTCGCGCTTGTGCGCCGGTGGCGCGGGCGCGGGGGGAAGCGTACGGGGGAGGGGGAGTGTGGCGGCGGCGGCGCGCGGGGTAGGGACGGGCGCCGCCACCACCACCGGCTCGTTCGCTGGCAGGCGCTACGCGTCCAGATCCGTACGCCGGTTGTTGAGAAGTGAAGATGTCGACAGGTGAAACCCTGCGTGCAGAGCTATCATCCAGGACGCCGCCTTTCGGTTTGAGGCTATGGATTGTGATTGGAATCAGTATTTGGGTGGTGATCTTCTTTATACTAGGTTTCATGTGCCTCTGGTCCATATACCGAAGGAAGCCGAAGAAGTCCTTTGATAAGATTCCAGTATCTCAAATCCCGGATGTTTCCAAGGAGATTGCAGTAGATGAAGTTCGTGAGCATGCTGTTGTCGAAAACTTCCGTGTGCAAGAAAGCCACGCGATATCGGTGCAGGAGAAACATTACGAGAAAGATTCAGGGAAAATGCTGGCACACTTGGTTAGGAGTAAATCGAGTGATGCCGATAATTTGAGCCAATGCAGCTCGGTGTACCAATGTGATAGGGCTGGTAGCTCGTATTCTGGTGATGAAGGCAGCTCGGGCAATGCTAGGAGGCACTTTTCTCAATATGCAACTGTCTCAGCATCCCCTCTGGTTGGTCTCCCAGAATTCTCTCATCTGGGCTGGGGTCATTGGTTTACTCTGAGAGATTTGGAGCATGCAACAAATCGGTTTTCCAAGGAGAATGTCATTGGAGAGGGTGGATATGGGGTAGTTTACCGTGGTCGACTCATAAATGGAACTGACGTCGCAATAAAGAAGCTTCTTAATAATATGGGCCAGGCAGAAAAGGAGTTCAGGGTTGAAGTTGAGGCTATTGGCCACGTCAGGCATAAGAATCTTGTCCGCCTTCTAGGATATTGTGTTGAGGGAATCCACAGGATGCTTGTATACGAATATGTGAATAACGGGAACTTAGAACAGTGGCTTCATGGTGCCATGCGCCAACATGGTGTTCTTACCTGGGAAGCCCGAATGAAAGTTGTTCTTGGAATTGCTAAAGCGCTTGCTTATTTACATGAAGCAATAGAGCCAAAAGTTGTACACCGGGATATCAAATCAAGCAACATACTAATCGATGAAGAATTCAATGGCAAACTTTCTGATTTTGGCTTGGCTAAGATGCTGGGTGCAGGGAAGAGCCATATCACAACTCGAGTTATGGGAACTTTTGGGTATGTGGCCCCTGAGTATGCCAACACAGGTCTGTTAAACGAGAAGAGTGATGTCTACAGTTTTGGTGTGCTATTACTGGAAGCAGTGACTGGTAGAGATCCAGTTGATTATGGCCGGCCTGCTAATGAGGTGCATCTAGTGGAGTGGCTCAAAATGATGGTTGGCACAAGAAGATCTGAAGAGGTAGTTGACCCTGACATGGAGGTCAAACCGACCATTCGGGCTCTTAAGCGTGCTCTCCTAGTGGCACTGAGGTGCGTCGACCCAGACTCTGAGAAAAGACCTACTATGGGTCATGTTGTTCGGATGCTCGAGGCAGAAGATGTCCCATCCCGTGAGGACCGGAGGAGCCGGAGGGGCAACACTGCCAATGCAGATACCGAGTCCAAGACAAGCTCAAGCGAATTCGAGATAAGTGGCGATAGAAGGGACTCAGGGCCATCAGCAAGGTTTCAACCCTAAGAAGACGGTGATCATAGTCAAGAACAATGGCTTCAAAACTCTATGCAGTAACATGGTGGTTGGCAGAGAAAAAGGGGTATTTCTGGAGGGCATTGCATTTTGTATTGTAGGTCTGCATGGCGGTAGAGACTGGAGAGAGCACAGTGTCTGATGATGGATACCCGGAGACCTGTAATTCCCATTCAGTATTCTGTTTGCTAGTCAAGCAGCTTGTACAGATCGTTGTCTGTTCCATTTTTTCATTCTTCTGGTTTTTTTGTTTAGGAGGCTCTTGGATTACCAGTACGAACCGCTGTCTCTTTTCTAGAATCACCAACATGGAACCTATCAATATTTACTACTAGTACTACGACTTGCTTT]
[+] EMBL AK073182             [                        CGGCCACCGCGCGCTCTCTCTCTCTCTCTCCCCCTTCTCCCGCAAGATTCTTCCCCCAAATCCCACCCGATCCACCGCCGCCGCCCGCTCGCCGGAGTCCCATCGCTGCCACCGCCGCCGGAGCCGCGGCCCGACGCCCGCCGGGCCTGCTTGCTGTGTGTGTGAGGAGGTGGAGTTGCTCGCGCTCGTTCCCGCGGCCACCTCCGCCTGCTGCTGCTTCTGCTTCCGCTGGCATTGCGGGGAGGTCGTGTGCCGGGGGACGTGGGGGCTCGTGTTGGAGCGCGGCTGCCGGTGAGGTGGGGGGTGCGGCGCGGCGCGGCTCGCGCTTGTGCGCCGGTGGCGCGGGCGCGGGGGGAAGCGTACGGGGGAGGGGGAGTGTGGCGGCGGCGGCGCGCGGGGTAGGGACGGGCGCCGCCACCACCACCGGCTCGTTCGCTGGCAGGCGCTACGCGTCCAGATCCGTACGCCGGTTGTTGAGAAGTGAAGATGTCGACAGGTGAAACCCTGCGTGCAGAGCTATCATCCAGGACGCCGCCTTTCGGTTTGAGGCTATGGATTGTGATTGGAATCAGTATTTGGGTGGTGATCTTCTTTATACTAGGTTTCATGTGCCTCTGGTCCATATACCGAAGGAAGCCGAAGAAGTCCTTTGATAAGATTCCAGTATCTCAAATCCCGGATGTTTCCAAGGAGATTGCAGTAGATGAAGTTCGTGAGCATGCTGTTGTCGAAAACTTCCGTGTGCAAGAAAGCCACGCGATATCGGTGCAGGAGAAACATTACGAGAAAGATTCAGGGAAAATGCTGGCACACTTGGTTAGGAGTAAATCGAGTGATGCCGATAATTTGAGCCAATGCAGCTCGGTGTACCAATGTGATAGGGCTGGTAGCTCGTATTCTGGTGATGAAGGCAGCTCGGGCAATGCTAGGAGGCACTTTTCTCAATATGCAACTGTCTCAGCATCCCCTCTGGTTGGTCTCCCAGAATTCTCTCATCTGGGCTGGGGTCGTTGGTTTACTCTGAGAGATTTGGAGCATGCAACAAATCGGTTTTCCAAGGAGAATGTCATTGGAGAGGGTGGATATGGGGTAGTTTACCGTGGTCGACTCATAAATGGAACTGACGTCGCAATAAAGAAGCTTCTTAATAATATGGGCCAGGCAGAAAAGGAGTTCAGGGTTGAAGTTGAGGCTATTGGCCACGTCAGGCATAAGAATCTTGTCCGCCTTCTAGGATATTGTGTTGAGGGAATCCACAGGATGCTTGTATACGAATATGTGAATAACGGGAACTTAGAACAGTGGCTTCATGGTGCCATGCGCCAACATGGTGTTCTTACCTGGGAAGCCCGAATGAAAGTTGTTCTTGGAATTGCTAAAGCGCTTGCTTATTTACATGAAGCAATAGAGCCAAAAGTTGTACACCGGGATATCAAATCAAGCAACATACTAATCGATGAAGAATTCAATGGCAAACTTTCTGATTTTGGCTTGGCTAAGATGCTGGGTGCAGGGAAGAGCCATATCACAACTCGAGTTATGGGAACTTTTGGGTATGTGGCCCCTGAGTATGCCAACACAGGTCTGTTAAACGAGAAGAGTGATGTCTACAGTTTTGGTGTGCTATTACTGGAAGCAGTGACTGGTAGAGATCCAGTTGATTATGGCCGGCCTGCTAATGAGGTGCATCTAGTGGAGTGGCTCGAAATGATGGTTGGCACAAGAAGATCTGAAGAGGTAGTTGACCCTGACATGGAGGTCAAACCGACCATTCGGGCTCTTAAGCGTGCTCTCCTAGTGGCACTGAGGTGCGTCGACCCAGACTCTGAGAAAAGACCTACTATGGGTCATGTTGTTCGGATGCTCGAGGCAGAAGATGTCCCATCCCGTGAGGACCGGAGGAGCCGGAGGGGCAACACTGCCAATGCAGATACCGAGTCCAAGACAAGCTCAAGCGAATTCGAGATAAGTGGCGATAGAAGGGACTCAGGGCCATCAGCAAGGTTTCAACCCTAAGAAGACGGTGATCATAGTCAAGAACAATGGCTTCAAAACTCTATGCAGTAACATGGTGGTTGGCAGAGAAAAAGGGGTATTTCTGGAGGGCATTGCATTTTGTATTGTAGGTCTGCATGGCGGTAGAGACTGGAGAGAGCACAGTGTCTGATGATGGATACCCGGAGACCTGTAATTCCCATTCAGTATTCTGTTTGCTAGTCAAGCAGCTTGTACAGATCGTTGTCTGTTCCATTTTTTCATTCTTCTGGTTTTTTTGTTTAGGAGGCTCTTGGATTACCAGTACGAACCGCTGTCTCTTTTCTAGAATCACCAACATGGAACCTATCAATATTTAC                      ]
[+] EMBL CA999695             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGGTTGGCACAAGAAGAGCTGAAGAGGTAGTTGACCCTGACATGGAGGTCAAACCGACCATTCGGGCTCTTAAGCGTGCTCTCCTAGTGGCACTGAGGTGCGTCGACCCAGACTCTGAGAAAAGACCTACTATGGGTCATGTTGTTCGGATGCTCGAGGCAGAAGATGTCCCATCCCGTGAGGACCGGAGGAGCCGGAGGGGCAACACTGCCAATGCAGATACCGAGTCCAAGACAAGCTCAAGCGAATTCGAGATAAGTGGCGATAGAAGGGACTCAGGGCCATCAGCAAGGTTTCAACTCTAAGAAGACGGTGATCATAGTCAAGAACAATGGCTTCAAAACTCTATGCAGTAACATGGTGGTTGGCAGAGAAAAAGGGGTATTTCTGGAGGGCATTGCATTTTGTATTGTAGGTCTGCATGGCGGTAGAGACTGGAGAGAGCACAGTGTCTGATGATGGATACCCGGAGACCTGTAATTCCCATTCAGTATTCTGTTTGTTAGTCAAGCAGCTTGTACAGATCGTTGTCTGTTCCATTTTTTCATTCTTCTGGTTTTTTTGTTTAGGAGGCTCTTGGATTACCAGTACGAACCGCTGTCTCTTTTCTAG                                                     ]




>consensus_5382#0
TACTCTCTCCACTTCCACTCTCACCGGCCACCGCGCGCTCTCTCTCTCTCTCTCCCCCTT
CTCCCGCAAGATTCTTCCCCCAAATCCCACCCGATCCACCGCCGCCGCCCGCTCGCCGGA
GTCCCATCGCTGCCACCGCCGCCGGAGCCGCGGCCCGACGCCCGCCGGGCCTGCTTGCTG
TGTGTGTGAGGAGGTGGAGTTGCTCGCGCTCGTTCCCGCGGCCACCTCCGCCTGCTGCTG
CTTCTGCTTCCGCTGGCATTGCGGGGAGGTCGTGTGCCGGGGGACGTGGGGGCTCGTGTT
GGAGCGCGGCTGCCGGTGAGGTGGGGGGTGCGGCGCGGCGCGGCTCGCGCTTGTGCGCCG
GTGGCGCGGGCGCGGGGGGAAGCGTACGGGGGAGGGGGAGTGTGGCGGCGGCGGCGCGCG
GGGTAGGGACGGGCGCCGCCACCACCACCGGCTCGTTCGCTGGCAGGCGCTACGCGTCCA
GATCCGTACGCCGGTTGTTGAGAAGTGAAGATGTCGACAGGTGAAACCCTGCGTGCAGAG
CTATCATCCAGGACGCCGCCTTTCGGTTTGAGGCTATGGATTGTGATTGGAATCAGTATT
TGGGTGGTGATCTTCTTTATACTAGGTTTCATGTGCCTCTGGTCCATATACCGAAGGAAG
CCGAAGAAGTCCTTTGATAAGATTCCAGTATCTCAAATCCCGGATGTTTCCAAGGAGATT
GCAGTAGATGAAGTTCGTGAGCATGCTGTTGTCGAAAACTTCCGTGTGCAAGAAAGCCAC
GCGATATCGGTGCAGGAGAAACATTACGAGAAAGATTCAGGGAAAATGCTGGCACACTTG
GTTAGGAGTAAATCGAGTGATGCCGATAATTTGAGCCAATGCAGCTCGGTGTACCAATGT
GATAGGGCTGGTAGCTCGTATTCTGGTGATGAAGGCAGCTCGGGCAATGCTAGGAGGCAC
TTTTCTCAATATGCAACTGTCTCAGCATCCCCTCTGGTTGGTCTCCCAGAATTCTCTCAT
CTGGGCTGGGGTCATTGGTTTACTCTGAGAGATTTGGAGCATGCAACAAATCGGTTTTCC
AAGGAGAATGTCATTGGAGAGGGTGGATATGGGGTAGTTTACCGTGGTCGACTCATAAAT
GGAACTGACGTCGCAATAAAGAAGCTTCTTAATAATATGGGCCAGGCAGAAAAGGAGTTC
AGGGTTGAAGTTGAGGCTATTGGCCACGTCAGGCATAAGAATCTTGTCCGCCTTCTAGGA
TATTGTGTTGAGGGAATCCACAGGATGCTTGTATACGAATATGTGAATAACGGGAACTTA
GAACAGTGGCTTCATGGTGCCATGCGCCAACATGGTGTTCTTACCTGGGAAGCCCGAATG
AAAGTTGTTCTTGGAATTGCTAAAGCGCTTGCTTATTTACATGAAGCAATAGAGCCAAAA
GTTGTACACCGGGATATCAAATCAAGCAACATACTAATCGATGAAGAATTCAATGGCAAA
CTTTCTGATTTTGGCTTGGCTAAGATGCTGGGTGCAGGGAAGAGCCATATCACAACTCGA
GTTATGGGAACTTTTGGGTATGTGGCCCCTGAGTATGCCAACACAGGTCTGTTAAACGAG
AAGAGTGATGTCTACAGTTTTGGTGTGCTATTACTGGAAGCAGTGACTGGTAGAGATCCA
GTTGATTATGGCCGGCCTGCTAATGAGGTGCATCTAGTGGAGTGGCTCAAAATGATGGTT
GGCACAAGAAGATCTGAAGAGGTAGTTGACCCTGACATGGAGGTCAAACCGACCATTCGG
GCTCTTAAGCGTGCTCTCCTAGTGGCACTGAGGTGCGTCGACCCAGACTCTGAGAAAAGA
CCTACTATGGGTCATGTTGTTCGGATGCTCGAGGCAGAAGATGTCCCATCCCGTGAGGAC
CGGAGGAGCCGGAGGGGCAACACTGCCAATGCAGATACCGAGTCCAAGACAAGCTCAAGC
GAATTCGAGATAAGTGGCGATAGAAGGGACTCAGGGCCATCAGCAAGGTTTCAACCCTAA
GAAGACGGTGATCATAGTCAAGAACAATGGCTTCAAAACTCTATGCAGTAACATGGTGGT
TGGCAGAGAAAAAGGGGTATTTCTGGAGGGCATTGCATTTTGTATTGTAGGTCTGCATGG
CGGTAGAGACTGGAGAGAGCACAGTGTCTGATGATGGATACCCGGAGACCTGTAATTCCC
ATTCAGTATTCTGTTTGCTAGTCAAGCAGCTTGTACAGATCGTTGTCTGTTCCATTTTTT
CATTCTTCTGGTTTTTTTGTTTAGGAGGCTCTTGGATTACCAGTACGAACCGCTGTCTCT
TTTCTAGAATCACCAACATGGAACCTATCAATATTTACTACTAGTACTACGACTTGCTTT
clustalw multiple alignements is not computed in this case