cluster # 5402

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5402 cluster # 5402 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5402#0 length = 464 sequences # 3

consensusID : consensus_5402#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 464
fasta sequence

                              [CGTGGAATTTTTCCTCGAGAGGAGGCGGCGGCGCAACGAAGACGCGACGGCGGGGGCGGCGCGCGGCGCGCGGCGCGATCCGGAGGCGACGGCGACGGCACGGCGCTCACCTCCGGCCGCCATCTTCTCTCCGGCTTTGGGAGGAAGGAAGTCTGAGAGGATGCTGGTTCAAATACTGAGTGGCTGAGCAAACATGTACATGATGCTGGTTTTGTAAAGGAGCAATAAATGTGGTTCTCTGAACATTGTATATTGCTGATGTAACCATTTGGCATAGGAGAGTACTGGTGTGGCAGCCCATGTTTATTTTTTATAGCTTGAAAGGTCACATAAATGCAAATTCTAAGTAGAAATGTCAAGTGAATCATGCCATATTTCAC--TTTTTTTTAGGCTTCATCAATGTGTATTTGATGCATCAGTAGCAAATGATGCATGACGTTCATGGGCCCATGCTTAATTATCTC]

[+] EMBL AK108436             [CGTGGAATTTTTCCTCGAGAGGAGGCGGCGGCGCAACGAAGACGCGACGGCGGGGGCGGCGCGCGGCGCGCGGCGCGATCCGGAGGCGACGGCGACGGCACGGCGCTCACCTCCGGCCGCCATCTTCTCTCCGGCTTTGGGAGGAAGGAAGTCTGAGAGGATGCTGGTTCAAATACTGAGTGGCTGAGCAAACATGTACATGATGCTGGTTTTGTAAAGGAGCAATAAATGTGGTTCTCTGAACATTGTATATTGCTGATGTAACCATTTGGCATAGGAGAGTACTGGTGTGGCAGCCCATGTTTATTTTTTATAGCTTGAAAGGTCACATAAATGCAAATTCTAAGTAGAAATGTCAAGTGAATCATGCCATATTTCAC  TTTTTTTTAGGCTTCATCAATGTGTATTTGATGCATCAGTAGCAAATGATGCATGACGTTCATGGGCCCATGCTTAATTATCTC]
[+] EMBL AU064196             [                                             GACGGCGGGGGCGGCGCGCG  GCGNGNCGCGATCCGGAGGCGACGGCGACGGCACGGCGTNCACCTCCGGCCGCCATCTTCTCTCCGGCTTTGGGAGGAAGGAAGTCTGAGAGGATGCTGGTTCAAATACTGAGTGGCTGAGCAAACATGTACATGATGCTGGTTTTGTAAAGGAGCAATAAATGTGGTTCTCTGAACATTGTATATTGCTGATGTAACCATTTGGCATAGGAGAGTACTGGTGTGGCAGCCCATGTTTATTTTTTATAGCTTGAAAGGTCACATAAATGCAAATTCTAAGTAGAAATGTCAAGTGAATCATGCCATATTTCACTTTTTTTTTTAGGCTTCATCAATGTGTATTTGATGCATCAGTAGCAAATGATGCA                               ]
[+] EMBL BI795652             [                                                                        GCGCGACCCGGAGGCGACGGCGACGGCACGGCGCTCACCTCC GCCGCCATCTTCTCTCCGGCTTTGGGAGGAAGGAAGTCTGAGAGGATGCTGGTTCAAATACTGAGTGGCTGAGC AACATGTACATGATGCTGGTTTTGTAAAGGAGCAATAAATGTGGTTCTCTGAACATTGTATATTGCTGATGTAACCATTTGGCATAGGAGAGTACTGGTGTGGCAGCCCATGTTTATTTTTTATAGCTTGAAAGGTCACATAAATGC AATTCTAAGTAGAAAaa                                                                                                               ]




>consensus_5402#0
CGTGGAATTTTTCCTCGAGAGGAGGCGGCGGCGCAACGAAGACGCGACGGCGGGGGCGGC
GCGCGGCGCGCGGCGCGATCCGGAGGCGACGGCGACGGCACGGCGCTCACCTCCGGCCGC
CATCTTCTCTCCGGCTTTGGGAGGAAGGAAGTCTGAGAGGATGCTGGTTCAAATACTGAG
TGGCTGAGCAAACATGTACATGATGCTGGTTTTGTAAAGGAGCAATAAATGTGGTTCTCT
GAACATTGTATATTGCTGATGTAACCATTTGGCATAGGAGAGTACTGGTGTGGCAGCCCA
TGTTTATTTTTTATAGCTTGAAAGGTCACATAAATGCAAATTCTAAGTAGAAATGTCAAG
TGAATCATGCCATATTTCACTTTTTTTTAGGCTTCATCAATGTGTATTTGATGCATCAGT
AGCAAATGATGCATGACGTTCATGGGCCCATGCTTAATTATCTC

clustalw multiple alignements is not computed in this case