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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5417 cluster # 5417       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5417#0 length = 501 sequences # 3  

consensusID : consensus_5417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 501
fasta sequence
                              [CTCACTGACGACGGCGAGGGTGGGAGCGGCGCTGCGCGCTCGGGAGGGGCCGGTCGATGCGGGAGCGGCCACGGCTGCGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGCCCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGACGGGCAGGCGCGGCGCGGCAGCGGTGGGATCGACGGCCGCGCCCTCGCCCTCCTAGATCCAGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCATCGCCGCTCACCACGCCGGCTTCCTCCCCCCTCGCCGCTTGCCACGCCGGCATCCGTCGCCGCGTGGAGGATGCAGAGGGGCGCCGCAGCCGCTGGAGCGCTCTCCTGCACCTTCCGCTCCCCTT-----CCCCCTCCCCGACGTCCCCGGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCACGTGGCCGGGGTTGGGGCCAGCGCGCGGTCGCCGC]

[+] EMBL CB660685             [CTCACTGACGACGGCGAGGGTGGGAGCGGCGCTGCGCGCTCGGGAGGGGCCGGTCGATGCGGGAGCGGCCACGGCTGCGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGCCCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGACGGGCAGGCGCGGCGCGGCAGCGGTGGGATCGACGGCCGCGCCCTCTCCCTCCTAGATCCAGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCTTCGCCGCTCACCACGCCGGCTTCCTCCCCCCTCGCCGCTTGCCACGCCGGCGTCCGTCTCCGCGCGGAGGATGC                                                                                                                                                         ]
[+] EMBL CB641877             [                           GGCGCTGCGCGCTCGGGAGGGGCCGGTCGATGCGGGAGCGGCCACGGCTGCGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGCCCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGACGGGCAGGCGCGGCGCGGCAGCGGTGGGATCGACGGCCGCGCCCTCGCCCTCCTAGATCCAGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCATCGCCGCTCACCACGCCGGCTTCCTCCCCCCTCGCCGCTTGCCACGCCGGCATCCGTCGCCGCGTGGAGGATGCAGAGGGGCGCCGCAGCCGCTGGAGCGCTCTCCTGCACCTTCCGCTCCCCTT     CCCCCTCCCCGACGTCCCCGGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCAC                                  ]
[+] EMBL CB623391             [                                                                             CGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGCCCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGACTGGCAGGCGCGGCGCGGCAGCGGTGGGTTCGACGGCCGCGCCCTCGCCCTCCTAGATCCAGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCATCGCCGCTCACCACGCCGGCTTCCTCCCCCCTCGCCGCTTGCCACGCCGGCATCCGTCGCCGCGTGGAGGATGCAGAGGGGCACCGCCGCCGCCGGAGCGCTCTCCTGCACCTTCCGCTCCCCTTCCCCCCCCCCCCCCCGACGTCCCCGGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCACGTGGCCGGGGTTGGGGCCAGCGCGCGGTCGCCGC]


>consensus_5417#0 CTCACTGACGACGGCGAGGGTGGGAGCGGCGCTGCGCGCTCGGGAGGGGCCGGTCGATGC GGGAGCGGCCACGGCTGCGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGC CCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGA CGGGCAGGCGCGGCGCGGCAGCGGTGGGATCGACGGCCGCGCCCTCGCCCTCCTAGATCC AGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCATCGCCGCTCACCACGCCGGCT TCCTCCCCCCTCGCCGCTTGCCACGCCGGCATCCGTCGCCGCGTGGAGGATGCAGAGGGG CGCCGCAGCCGCTGGAGCGCTCTCCTGCACCTTCCGCTCCCCTTCCCCCTCCCCGACGTC CCCGGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCACGTGGCCGGGGTTG GGGCCAGCGCGCGGTCGCCGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)