cluster # 5417

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Oryza sativa
cluster # 5417 cluster # 5417 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5417#0 length = 501 sequences # 3

consensusID : consensus_5417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 501
fasta sequence

                              [CTCACTGACGACGGCGAGGGTGGGAGCGGCGCTGCGCGCTCGGGAGGGGCCGGTCGATGCGGGAGCGGCCACGGCTGCGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGCCCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGACGGGCAGGCGCGGCGCGGCAGCGGTGGGATCGACGGCCGCGCCCTCGCCCTCCTAGATCCAGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCATCGCCGCTCACCACGCCGGCTTCCTCCCCCCTCGCCGCTTGCCACGCCGGCATCCGTCGCCGCGTGGAGGATGCAGAGGGGCGCCGCAGCCGCTGGAGCGCTCTCCTGCACCTTCCGCTCCCCTT-----CCCCCTCCCCGACGTCCCCGGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCACGTGGCCGGGGTTGGGGCCAGCGCGCGGTCGCCGC]

[+] EMBL CB660685             [CTCACTGACGACGGCGAGGGTGGGAGCGGCGCTGCGCGCTCGGGAGGGGCCGGTCGATGCGGGAGCGGCCACGGCTGCGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGCCCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGACGGGCAGGCGCGGCGCGGCAGCGGTGGGATCGACGGCCGCGCCCTCTCCCTCCTAGATCCAGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCTTCGCCGCTCACCACGCCGGCTTCCTCCCCCCTCGCCGCTTGCCACGCCGGCGTCCGTCTCCGCGCGGAGGATGC                                                                                                                                                         ]
[+] EMBL CB641877             [                           GGCGCTGCGCGCTCGGGAGGGGCCGGTCGATGCGGGAGCGGCCACGGCTGCGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGCCCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGACGGGCAGGCGCGGCGCGGCAGCGGTGGGATCGACGGCCGCGCCCTCGCCCTCCTAGATCCAGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCATCGCCGCTCACCACGCCGGCTTCCTCCCCCCTCGCCGCTTGCCACGCCGGCATCCGTCGCCGCGTGGAGGATGCAGAGGGGCGCCGCAGCCGCTGGAGCGCTCTCCTGCACCTTCCGCTCCCCTT     CCCCCTCCCCGACGTCCCCGGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCAC                                  ]
[+] EMBL CB623391             [                                                                             CGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGCCCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGACTGGCAGGCGCGGCGCGGCAGCGGTGGGTTCGACGGCCGCGCCCTCGCCCTCCTAGATCCAGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCATCGCCGCTCACCACGCCGGCTTCCTCCCCCCTCGCCGCTTGCCACGCCGGCATCCGTCGCCGCGTGGAGGATGCAGAGGGGCACCGCCGCCGCCGGAGCGCTCTCCTGCACCTTCCGCTCCCCTTCCCCCCCCCCCCCCCGACGTCCCCGGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCACGTGGCCGGGGTTGGGGCCAGCGCGCGGTCGCCGC]




>consensus_5417#0
CTCACTGACGACGGCGAGGGTGGGAGCGGCGCTGCGCGCTCGGGAGGGGCCGGTCGATGC
GGGAGCGGCCACGGCTGCGGGAGGGAGTGGCGCGGCAGCGGCGGGCTCGACGGCCGGCGC
CCTCCCCCTCCTAGATCCAGCGGCGGCGCGCTTGGGAGAGGTCGGGAACGGCCACGACGA
CGGGCAGGCGCGGCGCGGCAGCGGTGGGATCGACGGCCGCGCCCTCGCCCTCCTAGATCC
AGCGGCGGCACGCTCGGGAGGGGCCGGGACCGGCCACCATCGCCGCTCACCACGCCGGCT
TCCTCCCCCCTCGCCGCTTGCCACGCCGGCATCCGTCGCCGCGTGGAGGATGCAGAGGGG
CGCCGCAGCCGCTGGAGCGCTCTCCTGCACCTTCCGCTCCCCTTCCCCCTCCCCGACGTC
CCCGGCGCCCCATTGGCGGCCTCTCCTCGGCTTCCGCTCCCGCTCACGTGGCCGGGGTTG
GGGCCAGCGCGCGGTCGCCGC

clustalw multiple alignements is not computed in this case