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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5420 cluster # 5420       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5420#0 length = 434 sequences # 3  

consensusID : consensus_5420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 434
fasta sequence
                              [TGGCAAACAACTTTGAACTTGGTACCATAGGCCACAGCACTTTACCTTCAGGACTAAACTGCCTCCAGCAAGACACCCCTTGTTTCCGTGGATCTGCAGAATACTATTCCTTTGCGGTTGACTGCGGCAATAATAGAACGACTAGAGGCTTAGATGGAACTATTTACGAACCAGATGCTGCAAACCTTGGGGCTGCATCATATTATGTTACTAGTGACACAAGATGGGGTGTAAGCAATGTCGGGAACTACTTTCTGGCTACAGATGGAGTGAACATAATAAATAGTCCACAGAAAATTCAGAATGTCCTTGATTCAAGATTATTTGAAACTGCAAGGATGTCGGCGTCGTCGGTGAGGTATTATGGCCTTGGACTCGAGAATGGAAATTACACTGTTCTGCTTCAATTTGCCGAGTTTGCTTATCCAGACTCG]

[+] EMBL AU173281             [TGGCAAACAACTTTGAACTTGGTACCATAGGCCACAGCACTTTACCTTCAGGACTAAACTGCCTCCAGCAAGACACCCCTTGTTTCCGTGGATCTGCAGAATACTATTCCTTTGCGGTTGACTGCGGCAATAATAGAACGACTAGAGGCTTAGATGGAACTATTTACGAACCAGATGCTGCAAACCTTGGGGCTGCATCATATTATGTTACTAGTGACACAAGATGGGGTGTAAGCAATGTCGGGAACTACTTTCTGGCTACAGATGGAGTGAACATAATAAATAGTCCACAGAAAATTCAGAATGTCCTTGATTCAAGATTATTTGAAACTGCAAGGATGTCGGCGTCGTCGGTGAGGTATTATGGCCTTGGACTCGAGAATGGAAATTACACTGTTCTGCTTCAATTTGCCGAGTTTGCTTATCCAGACTCG]
[+] EMBL OSR15841A            [TGGCAAACAACTTTGAACTTGGTACCATAGGCCACAGCACTTTACCTTCAGGACTAAACTGCCTCCAGCAAGACACCCCTTGTTTCCGTGGATCTGCAGAATACTATTCCTTTGCGGTTGACTGCGGCAATAATAGAACGACTAGAGGCTTAGATGGAACTATTTACGAACCAGATGNTGCAAACCTTGGGGCTGCATCATATTATGTTACTAGTGACACAAGATGGGGTGTAAGCAATGTCGGGAACTACTTTCTGGCTACAGATGGAGTGAACATAATAAATAGTCCACAGNAAATTCAGAATGTCCTTGATTCAAGATTATTTGAAACTGCAAGGNTGTC                                                                                           ]
[+] EMBL OSR18291A            [TGGCAAACAACTTTGAACTTGGTACCATAGGCCACAGCACTTTACCTTCAGGACTAAACTGCCTCCAGCAAGACACCCCNTGTTTCCGTGGATCTGCAGAATACTATTCCTTTGCGGTTGACTGCGGCAATAATAGAACGACTAGAGGCTTAGATGGAACTATTTACGAACCAGATGCTGCAAACCTTGGGGCTGCATCATATTATGTTACTAGTGACACAAGATGGGGTGTAAGCAATGTCGGGAACTACTTTCTGGCTACAGATGGAGTNAACATAATAAATAGTCCACAGAAAATTCAGAATGTCCTTGATTCAA                                                                                                                    ]


>consensus_5420#0 TGGCAAACAACTTTGAACTTGGTACCATAGGCCACAGCACTTTACCTTCAGGACTAAACT GCCTCCAGCAAGACACCCCTTGTTTCCGTGGATCTGCAGAATACTATTCCTTTGCGGTTG ACTGCGGCAATAATAGAACGACTAGAGGCTTAGATGGAACTATTTACGAACCAGATGCTG CAAACCTTGGGGCTGCATCATATTATGTTACTAGTGACACAAGATGGGGTGTAAGCAATG TCGGGAACTACTTTCTGGCTACAGATGGAGTGAACATAATAAATAGTCCACAGAAAATTC AGAATGTCCTTGATTCAAGATTATTTGAAACTGCAAGGATGTCGGCGTCGTCGGTGAGGT ATTATGGCCTTGGACTCGAGAATGGAAATTACACTGTTCTGCTTCAATTTGCCGAGTTTG CTTATCCAGACTCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)