cluster # 5423

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Oryza sativa
cluster # 5423 cluster # 5423 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5423#0 length = 2288 sequences # 3
consensusID : consensus_5423#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2288
fasta sequence
                              [AGTAGTAGTAGGAGCAAGAGGCAAATTAAGGGGAAGCTGCAGGTGGTAGATGCGTAATGCGAGCGGCAGCAGCTGCTGCTCTCGGGTGGCGGCGCCGTTGCATGCGCAAGTGCTTGGCTCGCCGTCTCCTTCTCATGGCTACGGCGGCGCCGGCGACGGCTGTCTTCTGCAGGCACCTCCCCCGGCAGTCGTCTGCGGGGAGATGCTGGCACTGACGACGCCGGCGCCGCCGTCTCTTCTCCATGCACTGGCCTCCCTCAACGTCCTCCTCCTCGTCGCCTACCTCCTCCTCTTCCTCCTCGCCAAGCTCGCCGCCGGCCTTCACCGCCGAGGCCATGGTAGCTGTGACGAGCACCAGGTCACGGAGACCTCCGGGAGGGAGGAGTTCGCCGGCGCCGACGACATCGCCGGAGTGCAGCAGCAGCAAGCGGAGATGCTGTTCTGGTTCGACGAGGCCGTGTTCGAGGACACTGCTCTGCTTGGTGGCGAAGGAAAGGATCAGCTCATGTACGACGCTGCCACCACACCACCTACACCTACACCTGCACGTTGCTTGCAGGTGGAGAGCACCTTTCCCATGGTGGAATCCACCCGACGAATCTCGCCGCACCATCGCCAGTGCAGCTTCAGCCATGAGGAGCCCAAGGCCGCCGCCGCCGCCGCCGCCGCCACTGCGTCGAGCCAGAAGGATATCATTCCGGCCGCCGTGCCATCACCGGAGAACGTTCCCGTCGAAGCCGGGGAAGAGGACGGCCATGGCGAACACGGAGAAGAAGACGATGAGGAGGAGAAGAGGTTTAGGGGAGATGACGTGAAGCTGTTCGTGAACAGCCGGGCGCTCGCCGACACGAAGAAGCTGCTTCTGGAGGGCGCCATGGCCGGGAAAGGAGGAGTGCAGCGCGAGCGCGAGGAGGAGAGCAGGTTGGGCGCGTCGACGCTGACGAGCGAGTCGACGTCGAAGAGCTCGGTGGAGTGGCGGAGCTCGACGGTGACCAAGGACTCGGAGACGGAGTACCCCTTCTCGTCGTCGTCTCGCCGGAGCTCGTCGCGGTGGGAGTCGTACGCTCTCTTCCGCAAGTACGACGAGGACATGGTCTACTTCCATCGCGTCGGCGCCCAGAAGCTCACCGAGACAGAGTCGTACAGGTCGATAAAGTATCAGCCGCGATCGGTGTCGGAGCGGATCGTGCAGAAGCTGACGCCGAAGCCGCGGCCGGCGATCGGGCTGAGGGACCCGTACCCGGAGCTGGAGCGGGTGTACGTGGCGCAGATCTGCCTCACCTGGGAGGCGCTCAACTGGAACTACGCCAGCTTCCGCCGCCACGCCGGCGACATCGCGGCGAGGTGCTGCCCGGCGCGCGTCGCGCAGGAGTTCCAGCAATTCCAAGTTCTTCTTCACCGGTTCATCGAGAACGAGCCCTACGAGTACGGACTCCGCCCGGAGGTGTACGCCCGGATGAAGAACTCATCCCCCAAGCTTCTCCTCGTCCCAGAGTTCAGAGATGAGGAGGACGAGAAGGACGATCTGATATCGGCGGTGCAGTTCTTGTACATACTGGAGGAGTCGATCAGAACGTTCATGGCGTTCCTGCGTGCAGACAAGAGGAGCCACTACCAAATGTTCAGAGAAATGGTGAAGAGGAGGACCAGCTCCATGGATCAGACTCTGGTCATCACCCTCAAGAAGGCCAACAAGAAAAAGAAGAGCCGGCTCAAGGACCTGACGAGGCCAAGACGGTGTCTGAGGAGGACGAAGCTGAGGGAAGAAGAGGAGATGTCAATACTGCTGGGCTTAATCGACCTCAAGATCGTGGCCAGAGTGCTGCGAATGCCGGAGATCACCGATCAGCAGCTGCACTGGTGCGAGGAGAAGATGAACAGGGTCAAAGTCGACCCGGCTCAGGGCAAGATGCAGAGGGACCCGTCTCCTCTTTTCTTCCCTGCACATTGACAGCAGCATCAGCAGCTGTAACTAGCTAGTCCCTGCTTGTAATCTACTACTTTTTTCTTGCCCATCTCCTCTTCAAATCTTCCTTTGTTGATATAGTGAGAAAAA-GATAAAGTTGCATAGACGACATGAGAATATGCATGGCACGCAGCTAGCCTGATCTAGTTCTGTAAAAAGAGAGTCAGAG--ATCGATGAAGAGATCGTGTAAAGGCAATATATGTGTACTTATGTATTTATACATAGTAGATAAATAAGAGACCCACATCAATCTTGTAGTTGGGTGCATGTGATGTGGTGGGGGTGAGATACTATAAATTTGATCGTTGCATGCATGATGGAT]

[+] EMBL AK066377             [AGTAGTAGTAGGAGCAAGAGGCAAATTAAGGGGAAGCTGCAGGTGGTAGATGCGTAATGCGAGCGGCAGCAGCTGCTGCTCTCGGGTGGCGGCGCCGTTGCATGCGCAAGTGCTTGGCTCGCCGTCTCCTTCTCATGGCTACGGCGGCGCCGGCGACGGCTGTCTTCTGCAGGCACCTCCCCCGGCAGTCGTCTGCGGGGAGATGCTGGCACTGACGACGCCGGCGCCGCCGTCTCTTCTCCATGCACTGGCCTCCCTCAACGTCCTCCTCCTCGTCGCCTACCTCCTCCTCTTCCTCCTCGCCAAGCTCGCCGCCGGCCTTCACCGCCGAGGCCATGGTAGCTGTGACGAGCACCAGGTCACGGAGACCTCCGGGAGGGAGGAGTTCGCCGGCGCCGACGACATCGCCGGAGTGCAGCAGCAGCAAGCGGAGATGCTGTTCTGGTTCGACGAGGCCGTGTTCGAGGACACTGCTCTGCTTGGTGGCGAAGGAAAGGATCAGCTCATGTACGACGCTGCCACCACACCACCTACACCTACACCTGCACGTTGCTTGCAGGTGGAGAGCACCTTTCCCATGGTGGAATCCACCCGACGAATCTCGCCGCACCATCGCCAGTGCAGCTTCAGCCATGAGGAGCCCAAGGCCGCCGCCGCCGCCGCCGCCGCCACTGCGTCGAGCCAGAAGGATATCATTCCGGCCGCCGTGCCATCACCGGAGAACGTTCCCGTCGAAGCCGGGGAAGAGGACGGCCATGGCGAACACGGAGAAGAAGACGATGAGGAGGAGAAGAGGTTTAGGGGAGATGACGTGAAGCTGTTCGTGAACAGCCGGGCGCTCGCCGACACGAAGAAGCTGCTTCTGGAGGGCGCCATGGCCGGGAAAGGAGGAGTGCAGCGCGAGCGCGAGGAGGAGAGCAGGTTGGGCGCGTCGACGCTGACGAGCGAGTCGACGTCGAAGAGCTCGGTGGAGTGGCGGAGCTCGACGGTGACCAAGGACTCGGAGACGGAGTACCCCTTCTCGTCGTCGTCTCGCCGGAGCTCGTCGCGGTGGGAGTCGTACGCTCTCTTCCGCAAGTACGACGAGGACATGGTCTACTTCCATCGCGTCGGCGCCCAGAAGCTCACCGAGACAGAGTCGTACAGGTCGATAAAGTATCAGCCGCGATCGGTGTCGGAGCGGATCGTGCAGAAGCTGACGCCGAAGCCGCGGCCGGCGATCGGGCTGAGGGACCCGTACCCGGAGCTGGAGCGGGTGTACGTGGCGCAGATCTGCCTCACCTGGGAGGCGCTCAACTGGAACTACGCCAGCTTCCGCCGCCACGCCGGCGACATCGCGGCGAGGTGCTGCCCGGCGCGCGTCGCGCAGGAGTTCCAGCAATTCCAAGTTCTTCTTCACCGGTTCATCGAGAACGAGCCCTACGAGTACGGACTCCGCCCGGAGGTGTACGCCCGGATGAAGAACTCATCCCCCAAGCTTCTCCTCGTCCCAGAGTTCAGAGATGAGGAGGACGAGAAGGACGATCTGATATCGGCGGTGCAGTTCTTGTACATACTGGAGGAGTCGATCAGAACGTTCATGGCGTTCCTGCGTGCAGACAAGAGGAGCCACTACCAAATGTTCAGAGAAATGGTGAAGAGGAGGACCAGCTCCATGGATCAGACTCTGGTCATCACCCTCAAGAAGGCCAACAAGAAAAAGAAGAGCCGGCTCAAGGACCTGACGAGGCCAAGACGGTGTCTGAGGAGGACGAAGCTGAGGGAAGAAGAGGAGATGTCAATACTGCTGGGCTTAATCGACCTCAAGATCGTGGCCAGAGTGCTGCGAATGCCGGAGATCACCGATCAGCAGCTGCACTGGTGC CGGAGAAGATGAACAGGGTCAAAGTCGACCCGGCTCAGGGCAAGATGCAGAGGGACCCGTCTCCTCTTTTCTTCCCTGCACATTGACAGCAGCATCAGCAGCTGTAACTAGCTAGTCCCTGCTTGTAATCTACTACTTTTTTCTTGCCCATCTCCTCTTCAAATCTTCCTTTGTTGATATAGTGAGAAAAA GATAAAGTTGCATAGACGACATGAGAATATGCATGGCACGCAGCTAGCCTGATCTAGTTCTGTAAAAAGAGAGTCAGAG  ATCGATGAAGAGATCGTGTAAAGGCAATATATGTGTACTTATGTATTTATACATAGTAGATAAATAAGAGACCCACATCAATCTTGTAGTTGGGTGCATGTGATGTGGTGGGGGTGAGATACTATAAATTTGATCGTTGCATGCATGATGGAT]
[+] EMBL AK099326             [AGTAGTAGTAGGAGCAAGAGGCAAATTAAGGGGAAGCTGCAGGTGGTAGATGCGTAATGCGAGCGGCAGCAGCTGCTGCTCTCGGGTGGCGGCGCCGTTGCATGCGCAAGTGCTTGGCTCGCCGTCTCCTTCTCATGGCTACGGCGGCGCCGGCGACGGCTGTCTTCTGCAGGCACCTCCCCCGGCAGTCGTCTGCGGGGAGATGCTGGCACTGACGACGCCGGCGCCGCCGTCTCTTCTCCATGCACTGGCCTCCCTCAACGTCCTCCTCCTCGTCGCCTACCTCCTCCTCTTCCTCCTCGCCAAGCTCGCCGCCGGCCTTCACCGCCGAGGCCATGGTAGCTGTGACGAGCACCAGGTCACGGAGACCTCCGGGAGGGAGGAGTTCGCCGGCGCCGACGACATCGCCGGAGTGCAGCAGCAGCAAGCGGAGATGCTGTTCTGGTTCGACGAGGCCGTGTTCGAGGACACTGCTCTGCTTGGTGGCGAAGGAAAGGATCAGCTCATGTACGACGCTGCCACCACACCACCTACACCTACACCTGCACGTTGCTTGCAGGTGGAGAGCACCTTTCCCATGGTGGAATCCACCCGACGAATCTCGCCGCACCATCGCCAGTGCAGCTTCAGCCATGAGGAGCCCAAGGCCGCCGCCGCCGCCGCCGCCGCCACTGCGTCGAGCCAGAAGGATATCATTCCGGCCGCCGTGCCATCACCGGAGAACGTTCCCGTCGAAGCCGGGGAAGAGGACGGCCATGGCGAACACGGAGAAGAAGACGATGAGGAGGAGAAGAGGTTTAGGGGAGATGACGTGAAGCTGTTCGTGAACAGCCGGGCGCTCGCCGACACGAAGAAGCTGCTTCTGGAGGGCGCCATGGCCGGGAAAGGAGGAGTGCAGCGCGAGCGCGAGGAGGAGAGCAGGTTGGGCGCGTCGACGCTGACGAGCGAGTCGACGTCGAAGAGCTCGGTGGAGTGGCGGAGCTCGACGGTGACCAAGGACTCGGAGACGGAGTACCCCTTCTCGTCGTCGTCTCGCCGGAGCTCGTCGCGGTGGGAGTCGTACGCTCTCTTCCGCAAGTACGACGAGGACATGGTCTACTTCCATCGCGTCGGCGCCCAGAAGCTCACCGAGACAGAGTCGTACAGGTCGATAAAGTATCAGCCGCGATCGGTGTCGGAGCGGATCGTGCAGAAGCTGACGCCGAAGCCGCGGCCGGCGATCGGGCTGAGGGACCCGTACCCGGAGCTGGAGCGGGTGTACGTGGCGCAGATCTGCCTCACCTGGGAGGCGCTCAACTGGAACTACGCCAGCTTCCGCCGCCACGCCGGCGACATCGCGGCGAGGTGCTGCCCGGCGCGCGTCGCGCAGGAGTTCCAGCAATTCCAAGTTCTTCTTCACCGGTTCATCGAGAACGAGCCCTACGAGTACGGACTCCGCCCGGAGGTGTACGCCCGGATGAAGAACTCATCCCCCAAGCTTCTCCTCGTCCCAGAGTTCAGAGATGAGGAGGACGAGAAGGACGATCTGATATCGGCGGTGCAGTTCTTGTACATACTGGAGGAGTCGATCAGAACGTTCATGGCGTTCCTGCGTGCAGACAAGAGGAGCCACTACCAAATGTTCAGAGAAATGGTGAAGAGGAGGACCAGCTCCATGGATCAGACTCTGGTCATCACCCTCAAGAAGGCCAACAAGAAAAAGAAGAGCCGGCTCAAGGACCTGACGAGGCCAAGACGGTGTCTGAGGAGGACGAAGCTGAGGGAAGAAGAGGAGATGTCAATACTGCTGGGCTTAATCGACCTCAAGATCGTGGCCAGAGTGCTGCGAATGCCGGAGATCACCGATCAGCAGCTGCACTGGTGCGAGGAGAAGATGAACAGGGTCAAAGTCGACCCGGCTCAGGGCAAGATGCAGAGGGACCCGTCTCCTCTTTTCTTCCCTGCACATTGACAGCAGCATCAGCAGCTGTAACTAGCTAGTCCCTGCTTGTAATCTACTACTTTTTTCTTGCCCATCTCCTCTTCAAATCTTCCTTTGTTGATATAGTGAGAAAAA GATAAAGTTGCATAGACGACATGAGAATATGCATGGCACGCAGCTAGCCTGATCTAGTTCTGTAAAAAGAGAGTCAGAG  ATCGATGAAGAGATCGTGTAAAGGCAATATATGTGTACTTATGTATTTATACATAGTAGATAA                                                                                          ]
[+] EMBL BQ906083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCAAGATCGTGGCCAGAGTGCTGCGAATGCCGGAGATCACCGATCAGCAGCTGCACTGGTGCGAGGAGAAGATGAACAGGGTCAAAGTCGACCCGGCTCAGGGCAAGATGCAGAGGGACCCGTCTCCTCTTTTCTTCCCTGCACATTGACAGCAGCATCAGCAGCTGTAACTAGCTAGTCCCTGCTTGTAATCTACTACTTTTTTCTTGCCCATCTCCTCTTCAAATCTTCCTTTGTTGATGTAGTGAGAAAAACGATAAAGTTGCATAGACGACATGAGAATATGCATGGCACGCAGCTAGCCTGATCTAGTTCTGTAAAAAGAGAGTCAGAGATATCGATGAAGAGATCGTGTAAAGGCAATATATGTGTACTTATGTATTTATACATAGTAGATANATAAGAGACCCACATCAATCTTGTAaaaaaa                                                           ]




>consensus_5423#0
AGTAGTAGTAGGAGCAAGAGGCAAATTAAGGGGAAGCTGCAGGTGGTAGATGCGTAATGC
GAGCGGCAGCAGCTGCTGCTCTCGGGTGGCGGCGCCGTTGCATGCGCAAGTGCTTGGCTC
GCCGTCTCCTTCTCATGGCTACGGCGGCGCCGGCGACGGCTGTCTTCTGCAGGCACCTCC
CCCGGCAGTCGTCTGCGGGGAGATGCTGGCACTGACGACGCCGGCGCCGCCGTCTCTTCT
CCATGCACTGGCCTCCCTCAACGTCCTCCTCCTCGTCGCCTACCTCCTCCTCTTCCTCCT
CGCCAAGCTCGCCGCCGGCCTTCACCGCCGAGGCCATGGTAGCTGTGACGAGCACCAGGT
CACGGAGACCTCCGGGAGGGAGGAGTTCGCCGGCGCCGACGACATCGCCGGAGTGCAGCA
GCAGCAAGCGGAGATGCTGTTCTGGTTCGACGAGGCCGTGTTCGAGGACACTGCTCTGCT
TGGTGGCGAAGGAAAGGATCAGCTCATGTACGACGCTGCCACCACACCACCTACACCTAC
ACCTGCACGTTGCTTGCAGGTGGAGAGCACCTTTCCCATGGTGGAATCCACCCGACGAAT
CTCGCCGCACCATCGCCAGTGCAGCTTCAGCCATGAGGAGCCCAAGGCCGCCGCCGCCGC
CGCCGCCGCCACTGCGTCGAGCCAGAAGGATATCATTCCGGCCGCCGTGCCATCACCGGA
GAACGTTCCCGTCGAAGCCGGGGAAGAGGACGGCCATGGCGAACACGGAGAAGAAGACGA
TGAGGAGGAGAAGAGGTTTAGGGGAGATGACGTGAAGCTGTTCGTGAACAGCCGGGCGCT
CGCCGACACGAAGAAGCTGCTTCTGGAGGGCGCCATGGCCGGGAAAGGAGGAGTGCAGCG
CGAGCGCGAGGAGGAGAGCAGGTTGGGCGCGTCGACGCTGACGAGCGAGTCGACGTCGAA
GAGCTCGGTGGAGTGGCGGAGCTCGACGGTGACCAAGGACTCGGAGACGGAGTACCCCTT
CTCGTCGTCGTCTCGCCGGAGCTCGTCGCGGTGGGAGTCGTACGCTCTCTTCCGCAAGTA
CGACGAGGACATGGTCTACTTCCATCGCGTCGGCGCCCAGAAGCTCACCGAGACAGAGTC
GTACAGGTCGATAAAGTATCAGCCGCGATCGGTGTCGGAGCGGATCGTGCAGAAGCTGAC
GCCGAAGCCGCGGCCGGCGATCGGGCTGAGGGACCCGTACCCGGAGCTGGAGCGGGTGTA
CGTGGCGCAGATCTGCCTCACCTGGGAGGCGCTCAACTGGAACTACGCCAGCTTCCGCCG
CCACGCCGGCGACATCGCGGCGAGGTGCTGCCCGGCGCGCGTCGCGCAGGAGTTCCAGCA
ATTCCAAGTTCTTCTTCACCGGTTCATCGAGAACGAGCCCTACGAGTACGGACTCCGCCC
GGAGGTGTACGCCCGGATGAAGAACTCATCCCCCAAGCTTCTCCTCGTCCCAGAGTTCAG
AGATGAGGAGGACGAGAAGGACGATCTGATATCGGCGGTGCAGTTCTTGTACATACTGGA
GGAGTCGATCAGAACGTTCATGGCGTTCCTGCGTGCAGACAAGAGGAGCCACTACCAAAT
GTTCAGAGAAATGGTGAAGAGGAGGACCAGCTCCATGGATCAGACTCTGGTCATCACCCT
CAAGAAGGCCAACAAGAAAAAGAAGAGCCGGCTCAAGGACCTGACGAGGCCAAGACGGTG
TCTGAGGAGGACGAAGCTGAGGGAAGAAGAGGAGATGTCAATACTGCTGGGCTTAATCGA
CCTCAAGATCGTGGCCAGAGTGCTGCGAATGCCGGAGATCACCGATCAGCAGCTGCACTG
GTGCGAGGAGAAGATGAACAGGGTCAAAGTCGACCCGGCTCAGGGCAAGATGCAGAGGGA
CCCGTCTCCTCTTTTCTTCCCTGCACATTGACAGCAGCATCAGCAGCTGTAACTAGCTAG
TCCCTGCTTGTAATCTACTACTTTTTTCTTGCCCATCTCCTCTTCAAATCTTCCTTTGTT
GATATAGTGAGAAAAAGATAAAGTTGCATAGACGACATGAGAATATGCATGGCACGCAGC
TAGCCTGATCTAGTTCTGTAAAAAGAGAGTCAGAGATCGATGAAGAGATCGTGTAAAGGC
AATATATGTGTACTTATGTATTTATACATAGTAGATAAATAAGAGACCCACATCAATCTT
GTAGTTGGGTGCATGTGATGTGGTGGGGGTGAGATACTATAAATTTGATCGTTGCATGCA
TGATGGAT
clustalw multiple alignements is not computed in this case