cluster # 5428

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Oryza sativa
cluster # 5428 cluster # 5428 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5428#0 length = 416 sequences # 3

consensusID : consensus_5428#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 416
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCAAAAAACGGACAATGGGTGATTACTATTACGGGGGGCAAGGGAACCCTTGGGATACAATATTCCTTTACAAAGCTTGCTAAATGCAAACCCCCAATACCGTCGGCGCAAAACAATTTTAAATAAAGTTTACCCAAAATACCCAACATGCAAACCTTTCGGACTGACCAAAAATGAGGGTTTTTAAACCTGCCGGGGGGGGCCTTGCATAAAAAATGCCAAACAACTAAATTGTACCCCCCAACATAAAAGGAAAAGGCTTGGTTAATGCCCCAAAAATGGATGATAAAAACCCCAAATTGGGACCCTTTTTTCACCAACCATATAAAACCCCTAAATTTTGGCAAGTTTCTCCCCCTT]

[+] EMBL CF276860             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCAAAAAACGGACAATGGGTGATTACTATTACGGGGGGCAAGGAAACCCTTGGGATACAATATTCCTTTACAAAGCTTGTTAAATGCAAACCCCCAATACCGTCGGCGCAAAACAATTTTAAATAAAGTTTACCCAAAATACCCAACATGCAAACCTTTTGGACTGACCAAAAATAAGGGTTTTTAAACCTGCCGGGGGGGGCCTTGCATAAAAAATGCCAAAAAACTAAATTGTCCCCCCCAACATAAAAGGAAAAGGCTTGGTTAATGCCCCAAAAATGGATGATAAAAACCCCAAATTGGGACCCTTTTTTCACCAACCATATAAAACCCCTAAATTTTGTCAAGTTTCTCCCCCTT]
[+] EMBL CF279062             [   TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT        AACGGACAATGGGTGATTACTTTTACGGGGGGCAAGGGAACCCTTCGGATACAATATTCCTTTACAAAGCTTGCTAAATGCAAACCCCCAATACCGTCGGCGCAAAACAATTTTAAATAAAGTTTACCCAACATACCCAACTTGCAAACCTTTCGGACTGACCAAAAATGAGGGTTTTTAAACCTGCCGGGGGGGGCCTTGCTTAAAAAATGCCAAACAATTAAATTGTACCCCCCAACATAAAAGGAAAAGGCTTGGTTAATGCCCCAAAAATGGATGATAAAAACCCCAAATTGGGACCCTTTTTTCACCAACCATTTAAAACCCCTAAATTTTGGCAAGT           ]
[+] EMBL CF332261             [    TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCAAAAAACGGACAATGGGTGATTACTATTACGGGGGGCAAGGGAACACTTGGGATACAATAGTCCATTACAAAGCTAGCTAAAGGCAAACCCACAATACCGGCGGCGCAAAACAATTATAAATAAAGCTTACCCAAAATACCCAACATGCAAACCTTTCGGACTGACCAAAAATGAGGGTTTTTGAAACTGCCGGGGGGGGCCATGCATAAAAAAGGCCGAGCAACTAAATTGGACCCCCCAACATAAAAGGAAAAGGCTTGGTTAATGCCCCAAAAATGGGTGATAAAAACCCCAAATTGGGACCCTTTTTTCACCAACCATATAAAACCCCTAAATTTTGGCAAGTT          ]




>consensus_5428#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCAA
AAAACGGACAATGGGTGATTACTATTACGGGGGGCAAGGGAACCCTTGGGATACAATATT
CCTTTACAAAGCTTGCTAAATGCAAACCCCCAATACCGTCGGCGCAAAACAATTTTAAAT
AAAGTTTACCCAAAATACCCAACATGCAAACCTTTCGGACTGACCAAAAATGAGGGTTTT
TAAACCTGCCGGGGGGGGCCTTGCATAAAAAATGCCAAACAACTAAATTGTACCCCCCAA
CATAAAAGGAAAAGGCTTGGTTAATGCCCCAAAAATGGATGATAAAAACCCCAAATTGGG
ACCCTTTTTTCACCAACCATATAAAACCCCTAAATTTTGGCAAGTTTCTCCCCCTT

clustalw multiple alignements is not computed in this case