cluster # 5440

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5440 cluster # 5440 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5440#0 length = 343 sequences # 3

consensusID : consensus_5440#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 343
fasta sequence

                              [TCTAAAATTCATAACTCCCAAATAAAAAGAGATAAAATAGAAATTCTTTTATCTAAATTCATCTTAGACCAGTACCTATCCCCTGTGCATAAATCATGCATTTTAGA-CATTTTGGATTTTTCGCATATTTCGGTGTTTAATCGCATAACGTGTACTTTGTTTAGATGATTGCTTAAACGGTGAAGAAGTGAATTAGGTGCTGACATTTTTCAGTTA-CAAGGAAAGTCCCACCTCCCTCTCTCTTTGATCACTTCTCTCTTTGTTCACTTTGAACCTATGTTTTGGAGG-TTATTGAAAATGTTTGTAAATCTTGCATGTCGATTGTACACTAATAAATTAAAAA]

[+] EMBL BI803494             [TCTAAAATTCATAACTCCCAAATAAAAAGAGATAAAATAGAAATTCTTTTATCTAAATTCATCTTAGACCAGTACCTATCCCCTGTGCATAAATCATGCATTTTAGAGCATTTTGGATTTTTCGCATATTTCGGTGTTTAATCGCATAACGTGTACTTTGTTTAGATGATTGCTTAAACGGTGAAGAAGTGAATTAGGTGCTGACATTTTTCAGTTACCAAGGAAAGTCCCACCTCCCTCTCTCTTTGATCACTTCTCTCTTTGTTCACTTTGAACCTATGTTTTGGAGG TTATTGAAAATGTTTGTAAATCTTGCATGTCGATTGTACACTAATAAATTAAAAA]
[+] EMBL BI803606             [ CTAAAATTCATAACTCCCAAATAAAAAGAGATAAAATAGAAATTCTTTTATCTAAATTCATCTTAGACCAGTACCTAT CCCTGTGCATAAATCATGCATTTTAGA CATTTTGGATTTTTCGCATATTTCGGTGTTTAATCGCATAACGTGTACTTTGTTTAGATGATTGCTTAAACGGTGAAGAAGTGAATTAGGTGCTGACATTTTTCAGTTA CAAGGAAAGTCCCACCTCCCTCTCTCTTTGATCACTTCTCTCTTTGTTCACTTTGAACCTATGTTTTGGAGG TTATTGAAAATGTTTGTAAATCTTGCATGTCGATTGTACACTAATAAATTAAAAA]
[+] EMBL BI804064             [   AAAATTCATAACTCCCAAATAAAAAGAGATAAAATAGAAATTCTTTTATCTAAATTCATCTTAGACCAGTACCTATCCACTGTGCATAAATCATCCATTTTAGA CATTTTGGATTTTTCGCATATTTCGGTGTTTAATCGCATAACGTGTACTTTGTTTAGATGATTGCTTAAACGGTGAAGAAGTGAATTAGGTGCTGACATTTTTCAGTTA CAAGGAAAGTCCCACCTCCCTCTCTCTTGGATCACTTCTCTCTTTGTTCACTTTGAACCTATGTTTTGGAGGTTTATTGAAAATGTTTGTAAATC TGCATGTCGATGGTACACTAATAAATAAAAA ]




>consensus_5440#0
TCTAAAATTCATAACTCCCAAATAAAAAGAGATAAAATAGAAATTCTTTTATCTAAATTC
ATCTTAGACCAGTACCTATCCCCTGTGCATAAATCATGCATTTTAGACATTTTGGATTTT
TCGCATATTTCGGTGTTTAATCGCATAACGTGTACTTTGTTTAGATGATTGCTTAAACGG
TGAAGAAGTGAATTAGGTGCTGACATTTTTCAGTTACAAGGAAAGTCCCACCTCCCTCTC
TCTTTGATCACTTCTCTCTTTGTTCACTTTGAACCTATGTTTTGGAGGTTATTGAAAATG
TTTGTAAATCTTGCATGTCGATTGTACACTAATAAATTAAAAA

clustalw multiple alignements is not computed in this case