cluster # 5447

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Oryza sativa
cluster # 5447 cluster # 5447 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5447#0 length = 747 sequences # 3

consensusID : consensus_5447#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 747
fasta sequence

                              [ACCCACGTCGTCGATCTCGTCCACTCCAATTACATCCATCCATCCGCTCTGCAACCTTCTCCGGTTGCTGCGAGCGAGAGCGAGAGCGATCGCTACAGCCGCCGGTGGCCAGCCATGGCTGAGGAGCAGAGGTGGCAGGAGGGCTGCCACCGCCTGTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACGCTCGACCTCTGCTCCAAGTGCTACCGCGACCGCCAAGGCCGGGAGAGTACTGCACCCGTCGTCGTCGCCGCCGCAGCCTCGGCCTGCCCGGCTACTCATCCTTCCTCGCCATCCTCGTCGTCTTGTCCGGCGTTCTTGCCTTCCTCCACTGCCGCCGAGGCTGGCGTCGTCGTCGCGGCGGTGGCGAAGGCGAGCAGGTGCGCGAGCTGTAGGAAGCGGGTGGGGCTTACGGGGTTCGCGTGCCGGTGCGGCGGCACGTTCTGCGGCGCACACCGGTACCCGGAGCGGCACGCGTGCGGCTTCGACTTCAAGGCCGCCGGCCGCGACGCCATCGCGCGCGCCAACCCGCTCATCAAGGGCGACAAGCTCAAGGACAAGATCTGATCCCTCCCCACCTGCCGTGCTCCCCGTCGCCGCCGGAAGAACGCGCGGTTGGATTCCAAATTAAATACGCTTATTATTATGTAAGCTACAGCCGGCCGGTGGTGGAATCGCCAGCCAGCCATGCATGCATGCGACTGAAATGAAAATGAGTTCATATCAAAAAAAAAA]

[+] EMBL AK063708             [ACCCACGTCGTCGATCTCGTCCACTCCAATTACATCCATCCATCCGCTCTGCAACCTTCTCCGGTTGCTGCGAGCGAGAGCGAGAGCGATCGCTACAGCCGCCGGTGGCCAGCCATGGCTGAGGAGCAGAGGTGGCAGGAGGGCTGCCACCGCCTGTGCGCCAACAACTGCGGCTTCTTCGGTAGCCCCGCCACGCTCGACCTCTGCTCCAAGTGCTACCGCGACCGCCAAGGCCGGGAGAGTACTGCACCCGTCGTCGTCGCCGCCGCAGCCTCGGCCTGCCCGGCTACTCATCCTTCCTCGCCATCCTCGTCGTCTTGTCCGGCGTTCTTGCCTTCCTCCACTGCCGCCGAGGCTGGCGTCGTCGTCGCGGCGGTGGCGAAGGCGAGCAGGTGCGCGAGCTGTAGGAAGCGGGTGGGGCTTACGGGGTTCGCGTGCCGGTGCGGCGGCACGTTCTGCGGCGCACACCGGTACCCGGAGCGGCACGCGTGCGGCTTCGACTTCAAGGCCGCCGGCCGCGACGCCATCGCGCGCGCCAACCCGCTCATCAAGGGCGACAAGCTCAAGGACAAGATCTGATCCCTCCCCACCTGCCGTGCTCCCCGTCGCCGCCGGAAGAACGCGCGGTTGGATTCCAAATTAAATACGCTTATTATTATGTAAGCTACAGCCGGCCGGCGGTGAAATCGCCAGCCAGCCATGCATGCATGCGACTGAAATGAAA                       ]
[+] EMBL BI801183             [                                                                                                                                                                      acactcGCTTCTTC GTA CCCCCCCACGCTCGACCTCTGCTCCAAGTGCTACCTCGACC CCAA GCC GGAGAGTACTGCACCCGTCGTCGTCGCCGCCGCAGCCTCGGCCTGCCCGGCTACTCATCCTTCCTCGCCATCCTCGTCGTCTTGTCCGGCGTTCTTGCCTTCCTCCACTGCCGCCGAGGCTGGCGTCGTCGTCGC GCGGTGGCGAAGGCGAGCAGGTGCGCGAGCTGTAGGAA CGGGTGGGGCTTACGGGGTTCGCGTGCCGGTGCGGCGGCACGTTCTGCGGCGCACACCGGTACCCGGAGCGGCACGCGTGCGGCTTCGACTTCAA GCCGCCGGCCGCGACGCCATCGCGCGCGCCAACCCGCTCATCAAGGGCGACAAGCTCAAGGACAAGATCTGATCCCTCCCCACCTGCCGTGCTCCCCGTCGCCGCCGGAAGAACGCGCGGTTGGATTCCAAATTAAATACGCTTATTATTATGTAAGCTACAGCCGGCCGGTGGTGGAATCGCCAGCCAGCCATGCATGCATGCGACTGAAATGAAAATGAGTTCATATCAAAAAAAAA ]
[+] EMBL BI800517             [                                                                                                                                                                                                                                                                  GTCGCCGCCGCAGCCTCGGCCTGCCCGGCTACTCATCCTTCCTCGCCATCCTCGTCGTCTTGTCCGGCGTTCTTGCCTTCCTCC CTGCCGCCGAGGCTGGCGTCGTCGTCTCGGCGGTGGCGAAGGCGAGCAGGTGCGCGAGCTGTAGGAAGCGGGTGGGGCTTACGGGGTTCGCGT CCGGT C GCGGCACGTTCTGCGGCGCACACCGGTACCCGGAGCGGCACGCGT CGGCTTCGACTTCAAGGCCGCCGGCCGCGACGCCATCGCGCGCGCCAACCCGCTCATCAAGGGCGACAAGCTCAAGGACAAGATCTGATCCCTCCCCACCTGCCGTGCTCCCCGTCGCCGCCGGAAGAACGCGCGGTTGGATTCCAAATTAAATACGCTTATTATTATGTAAGCTACAGCCGGCCGGTGGTGGAATCGCCAGCCAGCCATGCATGCATGCGACTGAAATGAAAATGAGTTCATATCAAAAAAAAAA]




>consensus_5447#0
ACCCACGTCGTCGATCTCGTCCACTCCAATTACATCCATCCATCCGCTCTGCAACCTTCT
CCGGTTGCTGCGAGCGAGAGCGAGAGCGATCGCTACAGCCGCCGGTGGCCAGCCATGGCT
GAGGAGCAGAGGTGGCAGGAGGGCTGCCACCGCCTGTGCGCCAACAACTGCGGCTTCTTC
GGTAGCCCCGCCACGCTCGACCTCTGCTCCAAGTGCTACCGCGACCGCCAAGGCCGGGAG
AGTACTGCACCCGTCGTCGTCGCCGCCGCAGCCTCGGCCTGCCCGGCTACTCATCCTTCC
TCGCCATCCTCGTCGTCTTGTCCGGCGTTCTTGCCTTCCTCCACTGCCGCCGAGGCTGGC
GTCGTCGTCGCGGCGGTGGCGAAGGCGAGCAGGTGCGCGAGCTGTAGGAAGCGGGTGGGG
CTTACGGGGTTCGCGTGCCGGTGCGGCGGCACGTTCTGCGGCGCACACCGGTACCCGGAG
CGGCACGCGTGCGGCTTCGACTTCAAGGCCGCCGGCCGCGACGCCATCGCGCGCGCCAAC
CCGCTCATCAAGGGCGACAAGCTCAAGGACAAGATCTGATCCCTCCCCACCTGCCGTGCT
CCCCGTCGCCGCCGGAAGAACGCGCGGTTGGATTCCAAATTAAATACGCTTATTATTATG
TAAGCTACAGCCGGCCGGTGGTGGAATCGCCAGCCAGCCATGCATGCATGCGACTGAAAT
GAAAATGAGTTCATATCAAAAAAAAAA

clustalw multiple alignements is not computed in this case