These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5460#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1614 fasta sequence [CAGACACTGCACTACTGCAGCCCCCCGACCCCGATTGATCGCACGTATCGCCGGCGGCATTGGCCAAGAACTAGCAGCCGCGCAGCGGATGCAAAGCCTCTCCCGCTCCACCCTCCTCGGCCTCGTCCGCCGCCTTCGCTTGTCCTCCCCTCCATCCCCCGCGCCCCAACCGCGCCGCCTCCTCTTGACCGCCTCCCCGCCGCCGCCGCCGCCGCCGACGACGACTGTCTGTTGTTCTCGTCCGGCGGCCGCGCCAGGGCGAGATGCTCGGACGATGGCGGTGGCCCTGGCGGCTTCTCCCGATCGATCCATGGGCCGTGAATCCCGATTTCGTCATGGATGGAGGAGTCTGACCAGCAGCTCTGAGGAAAAAGGAGCGCTGAAAGATGTACCGGCCGCTGCCATGCTGAAGAATAGAAATGATAACGAGAAGAAACGGAGTAGGAGGAGGAAGCCTGGAATAACCATCCTTAAGAATAGCGGACACCGTGATGGTTCTATATTTAAGGGCAACCGTGGCTGGAAAATAGACTTCCGTATTGCAAACCCTGATGAGACCCAGTTCGAGGCCATGATGCTGTCAGATCCTGGAGATTGCAAGCCAGATGAAATAGCATGTGTTATGCACCAACCATGTCCCATGCTGCAAATTTTTTCATTGAAATTGGCTAAAACTTCCATTGATCGTTTTCCAGTTGAGTTGTATGGATACATAGCAGTGCGGGATCTCATGGATCCACTGCGCAATTATGTTGTCCGTCGCAGCAGGGATGATACCATTGCCGTGAAGCCGGGTTCTCTCATCGGAATGACTGGACCCAAGCGTGGCATAAAATTCTGTTCATCTGCCCTAATTGAGTATGATATGAGAATCAAGACAGGAGAACAAGAAGAGGATGATATACAGCTGATTGACGGTGTATTAGGCATCTTTGATGATCTAAGCAAGCCATCGTGTAAACCGTTCAGAAGTCGCATTGATGGAGTTGGTGGGGCAGTTGACATCACCGTTGGACTGCTTCCCAGTGCAGTGGAGGCCATATTTGAAGTTTCCATATCAGAAGTCCAAAGTTGTTTCGATCTCACCGTGTGTTCTTATGCTGGTGGGTTAAGCCAACAATTTAAGATCTTTCAGGGCACCATTGGTGAGTCGTGTGGCTTGAGAAGGTCCGTGGTTGCTGTAATGTTGGATGGTATGTTGCACCTGAGGTTCATAGCTCGGAGAAAAGGCTCTAAACGGGATCATGAAATTGCTTGTTCAATCAGAGCAAAGAAACATGGAAGCTCCACCCACCAGTTAAATACT-GAGCTCGCTTCCTTCTT-GGTCAAGGTGAATTGGTCGACATTGCCTATGTAAATTCCTTATCTTTTCTGTTATTCCTTAAA-TTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGTGGATGTTTGAAATGACCATTTTAATT-CCCATGAAGGAATTAAACAGACCAGCAAAATTTGCTCAGTAGTCACTAGATTGTAGTTCTGA-TTCATGGTTAAGAGCCTAAGAATATGCTGGCCTGAGCCC] [+] EMBL AK100836 [CAGACACTGCACTACTGCAGCCCCCCGACCCCGATTGATCGCACGTATCGCCGGCGGCATTGGCCAAGAACTAGCAGCCGCGCAGCGGATGCAAAGCCTCTCCCGCTCCACCCTCCTCGGCCTCGTCCGCCGCCTTCGCTTGTCCTCCCCTCCATCCCCCGCGCCCCAACCGCGCCGCCTCCTCTTGACCGCCTCCCCGCCGCCGCCGCCGCCGCCGACGACGACTGTCTGTTGTTCTCGTCCGGCGGCCGCGCCAGGGCGAGATGCTCGGACGATGGCGGTGGCCCTGGCGGCTTCTCCCGATCGATCCATGGGCCGTGAATCCCGATTTCGTCATGGATGGAGGAGTCTGACCAGCAGCTCTGAGGAAAAAGGAGCGCTGAAAGATGTACCGGCCGCTGCCATGCTGAAGAATAGAAATGATAACGAGAAGAAACGGAGTAGGAGGAGGAAGCCTGGAATAACCATCCTTAAGAATAGCGGACACCGTGATGGTTCTATATTTAAGGGCAACCGTGGCTGGAAAATAGACTTCCGTATTGCAAACCCTGATGAGACCCAGTTCGAGGCCATGATGCTGTCAGATCCTGGAGATTGCAAGCCAGATGAAATAGCATGTGTTATGCACCAACCATGTCCCATGCTGCAAATTTTTTCATTGAAATTGGCTAAAACTTCCATTGATCGTTTTCCAGTTGAGTTGTATGGATACATAGCAGTGCGGGATCTCATGGATCCACTGCGCAATTATGTTGTCCGTCGCAGCAGGGATGATACCATTGCCGTGAAGCCGGGTTCTCTCATCGGAATGACTGGACCCAAGCGTGGCATAAAATTCTGTTCATCTGCCCTAATTGAGTATGATATGAGAATCAAGACAGGAGAACAAGAAGAGGATGATATACAGCTGATTGACGGTGTATTAGGCATCTTTGATGATCTAAGCAAGCCATCGTGTAAACCGTTCAGAAGTCGCATTGATGGAGTTGGTGGGGCAGTTGACATCACCGTTGGACTGCTTCCCAGTGCAGTGGAGGCCATATTTGAAGTTTCCATATCAGAAGTCCAAAGTTGTTTCGATCTCACCGTGTGTTCTTATGCTGGTGGGTTAAGCCAACAATTTAAGATCTTTCAGGGCACCATTGGTGAGTCGTGTGGCTTGAGAAGGTCCGTGGTTGCTGTAATGTTGGATGGTATGTTGCACCTGAGGTTCATAGCTCGGAGAAAAGGCTCTAAACGGGATCATGAAATTGCTTGTTCAATCAGAGCAAAGAAACATGGAAGCTCCACCCACCAGTTAAATACT GAGCTCGCTTCCTTCTT GGTCAAGGTGAATTGGTCGACATTGCCTATGTAAATTCCTTATCTTTTCTGTTATTCCTTAAATTTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGTGGATGTT ] [-] EMBL OSS4463A [ gTAAATACTGGAGCTCGCNCCCTCCTTGGGTCAAGGTGAATTGGCCGACATTGCCTATGTAAATTCCTTATCTTTTCTGTTATTCCTTAAA TTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGTGGATGTTTGAAATGACCATTTTAATT CCCATGAAGGAATTAAACAGACCAGCAAAATTTGCTCAGTAGTCACTAGATTGTAGTTCTGA TTCATGGTTAAGAGCCTAAGAATATGCTGGCCTGAGCCC] [-] EMBL OSS4894A [ TCTTTTCTGTTATTCCTTAAA TTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGNGGATGTTTGAAATNACCATTTTAATTCCCCATGAAGGAATTAAACANACCNGCAAAATTTGCTCAGTAGTCACTAGATTGTAGTTCTGANCTCATGGTTAAGAGCCTAAGAATATGNTGGCCTGAGCCC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||