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Oryza sativa
cluster # 5490 cluster # 5490       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5490#0 length = 802 sequences # 3  

consensusID : consensus_5490#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 802
fasta sequence
                              [CGGGCGGTGCGCGGCGAACGCGACGTGCCACGACGTTCAAACACCAAGCGGCGCGTGGGGCCACCAGTGCTCGTGCAAGTACGGAATGGCCGGCGATGGGTTCGCCGCCGGCGACGGATGTTATTCTACTACTACTATTTCCAATGCAGTAAAACGTCGTCGAATCCCGGAAATAGCGGTTGCCACAGCCGGTTCGGTGGCATTCTTGATCTGTCTCGCTCTCACTGTTTGGTGCCTCTTACGCCGCCGACAATGGCGGCGGAATAATGCCAAGCTCACAGTGAGGATGGCGCGGAAACATCTACCGAAGGATGCAAGATTCTTCCGCGGGAAACCCATTGAGGATGAGCTGGAGCTAGAGGCCGCCGGGCCCCGGCGATTCCACTACGGCGAGCTCGCCGCGGCCACGGCGAACTTCTCCGACGACAGGAGGCTGGGGAGCGGCGGCTTCGGGTCGGTGTACCGCGGGTTCTTGAACGGCGGCGACGTGGCCGTGAAGAGGGTGGCCGAGACATCTCGTCAGGGATGGAAGGAGTTCGTCGCCGAGGTGAGGATCATCAGCCGGCTCCGCCACCGCAACCTCGTCCCGCTCATCGGCTGGTGCCACGACGGCGGCGACGAGCTGCTCCTCGTCTACGAGCTCATGCCCAATGGCAGCCTCGACGCACACATCTACAGTTTGGAGAACGTGCTGCCATGGCCGGTCAGGTACGAAGTCGTGCTCGGCGTCGGCGCCGCGCTGATGTACCTGCACCACGAGGCGGAGCACCGCGTCGTGCACCGCGACATCAAGCCGAGCAAC]

[+] EMBL CB617732             [CGGGCGCTGCGCGGCGAACGCGACGTGCCACGACGTTCAAACACCAAGCGGCGCGTGGGGCCACCAGTGCTCGTGCAAGTACGGAATGGCCGGCGATGGGTTCGCCGCCGGCGACGGATGTTATTCTACTACTACTATTTCCAATGCAGTAAAACGTCGTCGAATCCCGGAAATAGCGGTTGCCACAGCCGGTTCGGTGGCATTCTTGATCTGTCTCGCTCTCACTGTTTGGTGCCTCTTACGCCGCCGACAATGGCGGCGGAATAATGCCAAGCTCACAGTGAGGATGGCGCGGAAACATCTACCGAAGGATGCAAGATTCTTCCGCGGGAAACCCATTGAGGATGAGCTGGAGCTAGAGGCCGCCGGGCCCCGGCGATTCCACTACGGCGAGCTCGCCGCGGCCACGGCGAACTTCTCCGACGACAGGAGGCTGGGGAGCGGCGGCTTCGGGTCGGTGTACCGCGGGTTCTTGAACGGCGGCGACGTGGCCGTGAAGAGGGTGGCCGAGACATCTCGTCAGGGATGGAAGGAGTTCGTCGCCGAGGTGAGGATCATCAGCCGGCTCCGCCACCGCAACCTCGTCCCGCTCATCGGCTGGTGCCACGACGGCGGCGACGAGCTGCTCCTCGTCTACGAGCTCATGCCCAATGGCAGCCTCGACGCACACATCTACAGTTTGGAGAACGTGCTGCCATGGCCGGTCAGGTACGAAGTCGTGCTCGGCGTCGGCGCCGCGCTGATGTACCTGCACCACGAGGCGGAGCACCGCGTCGTGCACCGCGACATCAAGCCGAGCAAC]
[+] EMBL CB622758             [CGGGCGGTGCGCGGCGAACGCGACGTGCCACGACGTTCAAACACCAAGCGGCGCGTGGGGCCACCAGTGCTCGTGCAAGTACGGAATGGCCGGCGATGGGTTCGCCGCCGGCGACGGATGTTATTCTACTACTACTATTTCCAATGCAGTAAAACGTCGTCGAATCCCGGAAATAGCGGTTGCCACAGCCGGTTCGGTGGCATTCTTGATCTGTCTCGCTCTCACTGTTTGGTGCCTCTTACGCCGCCGACAATGGCGGCGGAATAATGCCAAGCTCACAGTGAGGATGGCGCGGAAACATCTACCGAAGGATGCAAGATTCTTCCGCGGGAAACCCATTGAGGATGAGCTGGAGCTAGAGGCCGCCGGGCCCCGGCGATTCCACTACGGCGAGCTCGCCGCGGCCACGGCGAACTTCTCCGACGACAGGAGGCTGGGGAGCGGCGGCTTCGGGTCGGTGTACCGCGGGTTCTTGAACGGCGGCGACGTGGCCGTGAAGAGGGTGGCCGAGACATCTCGTCAGGGATGGAAGGAGTTCGTCGCCGAGGTGAGGATCATCAGCCGGCTCCGCCACCGCAACCTCGTCCCGCTCATCGGCTGGTGCCACGACGGCGGCGACGAGCTGCTCCTCGTCTACGAGCTCATGCCCAATGGCAGCCTCGACGCACACATCTACAGTTTGGAGAACGTGCTGCCATGGCCGGTCAGGTACGAAGTCGTGCTCGGCGTCGGCGCCGCGCTGATGTACCTGCACCACGAGGCGGAGCAGCGCGTCGTGCA                      ]
[+] EMBL CB618186             [CGGCCTGAGCGCGGCGAACGCGACGTGCCACGACGTTCAAACACCAAGCGGCGCGTGGGGCCACCAGTGCTCGTGCAAGTACGGAATGGCCGGCGATGGGTTCGCCGCCGGCGACGGATGTTATTCTACTACTACTATTTCCAATGCAGTAAAACGTCGTCGAATCCCGGAAATAGCGGTTGCCACAGCCGGTTCGGTGGCATTCTTGATCTGTCTCGCTCTCACTGTTTGGTGCCTCTTACGCCGCCGACAATGGCGGCGGAATAATGCCAAGCTCACAGTGAGGATGGCGCGGAAACATCTACCGAAGGATGCAAGATTCTTCCGCGGGAAACCCATTGAGGATGAGCTGGAGCTAGAGGCCGCCGGGCCCCGGCGATTCCACTACGGCGAGCTCGCCGCGGCCACGGCGAACTTCTCCGACGACAGGAGGCTGGGGAGCGGCGGCTTCGGGTCGGTGTACCGCGGGTTCTTGAACGGCGGCGACGTGGCCGTGAAGAGGGTGGCCGAGACATCTCGTCAGGGATGGAAGGAGTTCGTCGCCGAGGTGAGGATCATCAGCCGGCTCCGCCACCGCAACCTCGTCCCGCTCATCGGCTGGTGCCACGACGGCGGCGACGAGCTGCTCCTCGTCTACGAGCTCATGCCCAATGGCAGCCTCGACGCACACATCTACAGTTTGGAGAACGTGC                                                                                                              ]


>consensus_5490#0 CGGGCGGTGCGCGGCGAACGCGACGTGCCACGACGTTCAAACACCAAGCGGCGCGTGGGG CCACCAGTGCTCGTGCAAGTACGGAATGGCCGGCGATGGGTTCGCCGCCGGCGACGGATG TTATTCTACTACTACTATTTCCAATGCAGTAAAACGTCGTCGAATCCCGGAAATAGCGGT TGCCACAGCCGGTTCGGTGGCATTCTTGATCTGTCTCGCTCTCACTGTTTGGTGCCTCTT ACGCCGCCGACAATGGCGGCGGAATAATGCCAAGCTCACAGTGAGGATGGCGCGGAAACA TCTACCGAAGGATGCAAGATTCTTCCGCGGGAAACCCATTGAGGATGAGCTGGAGCTAGA GGCCGCCGGGCCCCGGCGATTCCACTACGGCGAGCTCGCCGCGGCCACGGCGAACTTCTC CGACGACAGGAGGCTGGGGAGCGGCGGCTTCGGGTCGGTGTACCGCGGGTTCTTGAACGG CGGCGACGTGGCCGTGAAGAGGGTGGCCGAGACATCTCGTCAGGGATGGAAGGAGTTCGT CGCCGAGGTGAGGATCATCAGCCGGCTCCGCCACCGCAACCTCGTCCCGCTCATCGGCTG GTGCCACGACGGCGGCGACGAGCTGCTCCTCGTCTACGAGCTCATGCCCAATGGCAGCCT CGACGCACACATCTACAGTTTGGAGAACGTGCTGCCATGGCCGGTCAGGTACGAAGTCGT GCTCGGCGTCGGCGCCGCGCTGATGTACCTGCACCACGAGGCGGAGCACCGCGTCGTGCA CCGCGACATCAAGCCGAGCAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)