cluster # 5494

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Oryza sativa
cluster # 5494 cluster # 5494 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5494#0 length = 809 sequences # 3

consensusID : consensus_5494#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 809
fasta sequence

                              [CACAAGCTAATTAAGGTACCAGCAACTCCATCACATCCTTAATTTGCAGCAGCAGGTAATTGTACACCGGCGAAGGAAATTAAAGGAAAGTAGGAGATCGATGGCCAAGCCAAGCGCCGCCGCCTGGTCCACCGGCCTCTTGGACTGCTTCGACGACTGCGGCCTATGCTGCATGACGTGCTGGTGCCCGTGCATCACGTTCGGGCGGGTGGCGGAGATGGTGGACAGGGGGTCGACGTCGTGCGGCACCAGCGGCGCGCTGTACGCGCTGCTGGCGACGGTCACCGGCTGCCAGTTCGTCTACTCCTGCGTCTACCGGGGCAAGATGCGCGCCCAGTACGGCCTCGGCGACGACGCCGCCTGCGCCGACTGCTGCGTCCACTTCTGGTGCAACAAGTGCGCGCTGTGCCAGGAGTACCGCGAGCTCGTCGCCCGCGGCTACGACCCCAAGCTCGGATGGGACCTCAACGTCCAGCGCGGCGCCGCCGCCGCCGCAGCGCCCGCCGTGCAGCACATGGGCCGTTAAATGGATTAGCTAGCTATAGCGTCACCTCGTATCTATCATATCATCGATCGATCGTACTTTGGGCGTGTGAAGTGGTGTCCAGTTAAAAAAAAGTTTTTTTTTTGGGAGCTAGTTATAGTATCCAGTTTTTTAAAAGAAATTTATAAGTGGTATATTAATTATATGCGTTTTTTTACTTGATACTATCTACTATGCCTCTATATACTCCTGTAATTAAGTTTGTGTAAGTATGGTGACGCATGGTCAGGTTTTGTTTGTAATTCTCTGCACTTAATCAATTGTT]

[+] EMBL AK071173             [CACAAGCTAATTAAGGTACCAGCAACTCCATCACATCCTTAATTTGCAGCAGCAGGTAATTGTACACCGGCGAAGGAAATTAAAGGAAAGTAGGAGATCGATGGCCAAGCCAAGCGCCGCCGCCTGGTCCACCGGCCTCTTGGACTGCTTCGACGACTGCGGCCTATGCTGCATGACGTGCTGGTGCCCGTGCATCACGTTCGGGCGGGTGGCGGAGATGGTGGACAGGGGGTCGACGTCGTGCGGCACCAGCGGCGCGCTGTACGCGCTGCTGGCGACGGTCACCGGCTGCCAGTTCGTCTACTCCTGCGTCTACCGGGGCAAGATGCGCGCCCAGTACGGCCTCGGCGACGACGCCGCCTGCGCCGACTGCTGCGTCCACTTCTGGTGCAACAAGTGCGCGCTGTGCCAGGAGTACCGCGAGCTCGTCGCCCGCGGCTACGACCCCAAGCTCGGATGGGACCTCAACGTCCAGCGCGGCGCCGCCGCCGCCGCAGCGCCCGCCGTGCAGCACATGGGCCGTTAAATGGATTAGCTAGCTATAGCGTCACCTCGTATCTATCATATCATCGATCGATCGTACTTTGGGCGTGTGAAGTGGTGTCCAGTTAAAAAAAAGTTTTTTTTTTGGGAGCTAGTTATAGTATCCAGTTTTTTAAAAGAAATTTATAAGTGGTATATTAATTATATGCGTTTTTTTACTTGATACTATCTACTATGCCTCTATATACTCCTGTAATTAAGTTTGTGTAAGTATGGTGACGCATGGTCAGGTTTTGTTTGTAATTCTCTGCACTTAATCAATTGTT]
[+] EMBL OSS3931A             [             AGGTACCAGCAACTCCATCACATCCTTAATTTGCAGCAGCAGGTAATTGTACACCGGCGAAGGAAATTAAAGGAAAGTAGGAGATCGATGGCCAAGCCAAGCGCCGCCGCCTGGTCCACCGGCCTCTTGGACTGCTTCGACGACTGCGGCCTATGCTGCATGACGTGCTGGTGCCCGTGCATCACGTTCGGGCGGGTGGCGGAGATGGTGGACAGGGGGTCGACGTCGTGCGGCACCAGCGGCGCGCTGTACGC NTGCTGGCGACGGTCACCGGCTGCCAGTTCGTCTACTCCTGCGTCTACCGGGGCAAGATGCGCGCCCAGTACGGCCTCGGCGACGACGCCGNCTGCGCCGACTGCTGCGTCCACTTCTGGTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSS3780A             [             AGGTACCAGCAACTCCATCACATCCTTAATTTGCAGCAGCAGGTAATTGTACACCGGCGAAGGAAATTAAAGGAAAGTAGGAGATCGATGGCCAAGCCAAGCGCCGCCGCCTGGTCCACCGGCCTCTTGGACTGCTTCGACGACTGCGGCCTATGCTGCATGACGTGCTGGTGCCCGTGCATCACGTTCGGGCGGGTGGCGGAGATGGTGGACAGGGGGTCGACGTCGTGCGGCACCAGCGGCGCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_5494#0
CACAAGCTAATTAAGGTACCAGCAACTCCATCACATCCTTAATTTGCAGCAGCAGGTAAT
TGTACACCGGCGAAGGAAATTAAAGGAAAGTAGGAGATCGATGGCCAAGCCAAGCGCCGC
CGCCTGGTCCACCGGCCTCTTGGACTGCTTCGACGACTGCGGCCTATGCTGCATGACGTG
CTGGTGCCCGTGCATCACGTTCGGGCGGGTGGCGGAGATGGTGGACAGGGGGTCGACGTC
GTGCGGCACCAGCGGCGCGCTGTACGCGCTGCTGGCGACGGTCACCGGCTGCCAGTTCGT
CTACTCCTGCGTCTACCGGGGCAAGATGCGCGCCCAGTACGGCCTCGGCGACGACGCCGC
CTGCGCCGACTGCTGCGTCCACTTCTGGTGCAACAAGTGCGCGCTGTGCCAGGAGTACCG
CGAGCTCGTCGCCCGCGGCTACGACCCCAAGCTCGGATGGGACCTCAACGTCCAGCGCGG
CGCCGCCGCCGCCGCAGCGCCCGCCGTGCAGCACATGGGCCGTTAAATGGATTAGCTAGC
TATAGCGTCACCTCGTATCTATCATATCATCGATCGATCGTACTTTGGGCGTGTGAAGTG
GTGTCCAGTTAAAAAAAAGTTTTTTTTTTGGGAGCTAGTTATAGTATCCAGTTTTTTAAA
AGAAATTTATAAGTGGTATATTAATTATATGCGTTTTTTTACTTGATACTATCTACTATG
CCTCTATATACTCCTGTAATTAAGTTTGTGTAAGTATGGTGACGCATGGTCAGGTTTTGT
TTGTAATTCTCTGCACTTAATCAATTGTT

clustalw multiple alignements is not computed in this case