cluster # 55

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Oryza sativa
cluster # 55 cluster # 55 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_55#0 length = 550 sequences # 2

consensusID : consensus_55#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 550
fasta sequence

                              [CGCCGTCCTCC-CCGTGCCGTCTCCTTCGGCAGC-CCGTCTCCCGCCGTCCGCCGCGCCGCCCGGCTCCCGATCGC-CCGCGCCGCCCCTTCTCGCA-CCGTCTGCAGCGTCAGGTGATCAGCCTCCCAAGTCTGCACTTGACAAGTTGAATCCATTATTTGAGGAGGTCATGAGAAAAGGAGTTTGTTCGATGGATCAATATATGACACTTTGTTCGATGGATCAATATATGACACTGGAAATCGTC-AAAGCATCCAACATGCTCGTATAGAGTTCAATCGAAAGGAAAATGACTGACCAGGATGGGAAGGCTGGAAGCCTGGAACGCAAGAGATTATGACAGTGTAGTAGTCTACATCTGTGAATTAAATTACTGAGACACTAGCTTTTGAATCATGCTGTAGTATGTTACTAGTTAAGTTCATTTCTCACTATCAACCGTGTCCAGTATAAACTTAACTGCCAATGCTGCTCGATGGAGGTCTTTATAACATATGATATGTCACTTCTGCTGGACGAACTATGTATGAAATAGATGGTAGAGCTAAAAAAA]

[+] EMBL BI799207             [CGCCGTCCTCC CCGTGCCGTCTCCTTCGGCAGC CCGTCTCCCGCCGTCCGCCGCGCCGCCCGGCTCCCGATCGC CCGCGCCGCCCCTTCTCGCA CCGTCTGCAGCGTCAGGTGATCAGCCTCCCAAGTCTGCACTTGACAAGTTGAATCCATTATTTGAGGAGGTCATGAGAAAAGGAGTTTGTTCGATGGATCAATATATGACACTTTGTTCGATGGATCAATATATGACACTGGAAATCGTC AAAGCATCCAACATGCTCGTATAGAGTTCAATCGAAAGGAAAATGACTGACCAGGATGGGAAGGCTGGAAGCCTGGAACGCAAGAGATTATGACAGTGTAGTAGTCTACATCTGTGAATTAAATTACTGAGACACTAGCTTTTGAATCATGCTGTAGTATGTTACTAGTTAAGTTCATTTCTCACTATCAACCGTGTCCAGTATAAACTTAACTGCCAATGCTGCTCGATGGAGGTCTTTATAACATATGATATGTCACTTCTGCTGGACGAACTATGTATGAAATAGATGGTAGAGCTAAAAAAA]
[+] EMBL BI798914             [ GCCGTCCTCCGCCGTGCCGTCTCCTTC GCAGCGCCGTCTCCCGCCGTCCGCCGCGCCGCCCGGCTCCCGATCGCGCCGC CCGCCCCTTCTCGCAGCCGTCTGCAGCGTCAGGTGATCAGCCTCCCAAGTCTGCACTTGACAAGTTGAATCCATTATTTGAGGAGGTCATGAGAAAAGGAGTTTGTTCGATGGATCAATATATGACACTTTGTTCGATGGATCAATATATGACACTGGAAATCGTCAAAAGCATCCAACATGCTCGTATAGAGTTCAATCGAAAGGAAAATGACTGACCAGGATGGGAAGGCTGGAAGCCTGGAACGCAAGAGATTATGACAGTGTAGTAGTCTACATCTGTGAATTAAATTACTGAGACACTAGCTTTTGAATCATGCTGTAGTATGTTACTAGTTAAGTTCATTTCTCACTATC ACCGTGTCCAGTATAAACTTAACTGCC ATGCTGCTCGATGGAGGTCTTTATAACATATGATATGTCACTTCTGCTGGACGAACTATGTATGAAATAGATGGTAGAGCTAACAAAA]




>consensus_55#0
CGCCGTCCTCCCCGTGCCGTCTCCTTCGGCAGCCCGTCTCCCGCCGTCCGCCGCGCCGCC
CGGCTCCCGATCGCCCGCGCCGCCCCTTCTCGCACCGTCTGCAGCGTCAGGTGATCAGCC
TCCCAAGTCTGCACTTGACAAGTTGAATCCATTATTTGAGGAGGTCATGAGAAAAGGAGT
TTGTTCGATGGATCAATATATGACACTTTGTTCGATGGATCAATATATGACACTGGAAAT
CGTCAAAGCATCCAACATGCTCGTATAGAGTTCAATCGAAAGGAAAATGACTGACCAGGA
TGGGAAGGCTGGAAGCCTGGAACGCAAGAGATTATGACAGTGTAGTAGTCTACATCTGTG
AATTAAATTACTGAGACACTAGCTTTTGAATCATGCTGTAGTATGTTACTAGTTAAGTTC
ATTTCTCACTATCAACCGTGTCCAGTATAAACTTAACTGCCAATGCTGCTCGATGGAGGT
CTTTATAACATATGATATGTCACTTCTGCTGGACGAACTATGTATGAAATAGATGGTAGA
GCTAAAAAAA

clustalw multiple alignements is not computed in this case