These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5520#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3634 fasta sequence [CACTGCTCCCTACCTACTCCTCCTCTTGCTCCTCCTAGCTTAGCTCTGGACCCGTTTTGGATCGCACTGACTCGCTGACCATCACTGTGAAATTGGGAGCTGTGGGCAGAAAGACTAGGCCTTGTATTGTTCAGAGAATCAGAGATTGAAGATGGATAGGAGGATTGGCCTTACCTCACCGTCACCAAAGTCGACCGAGAAGTCCGGGAGAGACTTGAGATCCGGAGGTGACGCCAATGGCGGCGCAAACACTAACAGTAACTCCATTCCCAGAGGTGATAAGGAGAAGGGAGTCAATGTGCAGGTCATTCTCAGATGCAGGCCCATGAGTGATGAAGAGACAAAGTCGAATACTCCGGTAGTGATCTCGTGCAATGAGCGCCGCCGTGAGGTCGCCGCGACACAAATTATTGCCAATAAGCAGATTGATCGGACCTTTGCATTTGACAAGGTGTTTGGTCCAGCATCGAAGCAGAAGGATTTGTTTGAGCAATCTATCTCACCAATAGTAAATGAGGTCCTTGAGGGCTATAATTGCACAATTTTTGCTTATGGGCAAACTGGTACTGGGAAAACCTACACAATGGAGGGAGGTGGAACTAGAAAGACCAAGAATGGTGAACTCCCAACTGATGCTGGAGTTATCCCAAGGGCTGTTAGGCAAATCTTTGACATTCTTGAAGCCCAGTGCGCTGAGTACAGCATGAAAGTCACCTTCCTTGAGCTCTACAACGAAGAAATCACTGATTTGTTGGCCCCTGAAGAACCAAAGTTCCCTATTGTTCCTGAAGACAAGACAAAGAAGCCTATTGCCCTCATGGAAGATGGCAAAGGAGGCGTTTTTGTGAGAGGGCTTGAAGAAGAAGTCGTGTACTCCGCTGGTGAAATCTACAAAATTCTTGACAAGGGTTCTGCAAAGAGGCGCACTGCAGAGACACTGCTGAACAAGCAAAGTAGTAGGTCACACTCCATTTTCTCTATCACAATTCACATCAAGGAACTGACTCATGAGGGTGAGGAGATGATCAAAATTGGGAAGCTTAATCTAGTCGATCTAGCTGGTTCAGAAAATATCTCACGGTCAGGTGCTAGAGATGGCAGAGCGAGAGAGGCTGGGGAGATCAACAAGAGCTTGCTGACACTTGGTCGAGTCATCAATGCTCTTGTTGAACACTCTGGACATGTCCCATACAGAGATAGCAAACTGACAAGATTGCTAAGAGACTCATTGGGAGGGAAAACAAAGACTTGCATTATTGCCACAATATCACCTTCAGTATATTGTTTGGAAGAGACACTGAGCACACTGGACTATGCACACCGTGCTAAAAATATCAAGAACAAGCCTGAGGTGAACCAAAGGATGATGAAATCTGCTGTGATCAAGGACCTGTACTCTGAAATTGACCGTCTTAAGCAAGAGGTGTTTGCTGCAAGAGAGAAGAATGGTATATACATTCCAAGAGAACGCTACCTCCAAGAGGAAGCCGAGAAAAAGGCCATGACAGAGAAAATTGAGCGTCTGGGAGCTGATTTAGAGGCTAGGGATAAGCAATTGGTTGAACTAAAAGAGCTTTATGATGCTGAACAACTTTTGAGTGCAGAGTTGAGTGAAAAACTCGGGAAGACGCAGAAAGATCTGGAGGACACCAAGAATGTTCTGCATGATTTAGAAGAAAAATACAATGAAGCAGAGTCAACCATTAAGGAAAAGGAATATGTCATCTTTAATTTATTAAAGTCAGAAAAATCACTGGTAGACTGTGCATATAACCTCCGTGCGGAATTGGAAAATGCAGCAGCAGATGTTTCAGGGCTATTTTCCAAAATAGAGCGTAAAGACAAGATAGAAGATGGGAACAGGTCACTCGTGCAGAGATTTAGATCTCAACTGACCAATCAGCTGGATACCTTGCATAAAACTGTGTCCACCTCAGTCATGCAGCAGGAGAATCACCTCAAAGAAATGGAAGATGATATGCAATCCTTTGTATCTTCAAAAGATGAGGCTGCTCAAGGGCTAAGGGAGAGCATACAAAAGTTGAAACTTCTCCATGGTTCAGGCATTACAGCTTTGGATAGTTTAGCAGGTGAAATTGACATGAACTCTCAGTCAACATTTGAGAGATTGAACTCGCAAGTGCAATCACACACGTCATCTCTTGAGCAATGTTTTGGAGGAATTGCTTCAGAAGCAGACAATTTGTTAAATGAGCTTCAGTGTAGCCTTTCTAAACAAGAAGAGAGGTTAACCCAATTTGCAAAGAAGCAGCGGGAGGGACACTTACGAGCTGTGGAAGCATCACGGTCCATCTCAAAGATCAC-TGCTGGTTTCTTCAGCTCAC-TTGATGTTCATGCATCTAAGCTCACGAGTATTTTGGAAGAAACGCAAAGTGTGCAAGATCAACAACTTCTTGACCTTGAGAAGAAATTTGAGGAGTGTGCAGCTAATGAAGAAAAACAACTTCTAGAGAAGGTGGCAGAGATGCTTGCAAGTTCCCATGCAAGGAAGAAGAAGCTGGTCCAAACAGCAGTAGGTAACCTTCGAGAGAGCGCTGTAAACCGCACAAGTCACCTACAGAATGAAATTTCAACTGCCCAGGACTTCACTTCGTCCGTGCGGGAAAAGTGGGGCTTTTACATGGAAGAAACTGAGAAGAATTACATTGAAGATACCACTGCAGTGGACAGTGGAAGGTCGTGCTTGGCAGAAGTGCTTGTGGAATGTAAGGCAAAGACAACCATGGGTGCACAACAGTGGAAGAACGCCGAGGACTCTCTTTTCAGCCTTGGCAAAGGAAATGTGGAATCGGCAGATTCAATAGTCAGGACTGGAACCGAGGCTAACCAATCGCTGCGTTCCAAATTGTCGTCTGCGGTATCAACTACCCTTGAAGAAATAGATATAGCAAACAAGGCCCTTCTTTCTTCCATCGACAGTTCACTAAAACTTGACCATGATGCGTGCGCAAACATTGGCTCCATAATCAAACCATGCCATGAGGAAATAAGCGAGTTGAAGGGAGGACATTACCACAGGGTTGTTGAGATTACTGAAAATGCTGGGAAATGCCTAGAGGAAGAATATCTGGTGGATGAACCATCATGTTCGACTCCGAGAAGGCGGCAAATCGACCTGCCAAGCATGGAATCCATTGAGCAGTTGCGAACCCCGGATTACGATGAGCTTCTCAAATCATTCCGAGAGTCGAGGGCGAGTTTGAAGCAGGCAAATGGAGACATGAAGCATTTCTTAGAGGTGCAAGAAGCTACACCACCATCAATCACAGACCCGAGAGCTCCTCTTATAGCAAGAAATTAGATTTATAGAGTGAATGTACAAAAGGAACAAATTGTTTAGCTTTGATTTTTGGGGTATTGATTTACTGTTGATAGTGCCATTCGATTTATTGCTGCTGTTGGTTGGGATGGGAGGTCTGAAGCTGATCTGTTTGTAGAGATCAGTAGAAAGGCATGTGTATTTACTACTGCATAATTGAGGATAATGTTAGCTCTAGTGTAATATATATCCACACAGGTAACAATGACAAGTGCTAGTACAGATTTGACTCAGATAATCTTCCATGCTTTGCTGCAAATTTGAACAATTATTAGAAGCAAAAGGAAAGGAATT] [+] EMBL AK068757 [CACTGCTCCCTACCTACTCCTCCTCTTGCTCCTCCTAGCTTAGCTCTGGACCCGTTTTGGATCGCACTGACTCGCTGACCATCACTGTGAAATTGGGAGCTGTGGGCAGAAAGACTAGGCCTTGTATTGTTCAGAGAATCAGAGATTGAAGATGGATAGGAGGATTGGCCTTACCTCACCGTCACCAAAGTCGACCGAGAAGTCCGGGAGAGACTTGAGATCCGGAGGTGACGCCAATGGCGGCGCAAACACTAACAGTAACTCCATTCCCAGAGGTGATAAGGAGAAGGGAGTCAATGTGCAGGTCATTCTCAGATGCAGGCCCATGAGTGATGAAGAGACAAAGTCGAATACTCCGGTAGTGATCTCGTGCAATGAGCGCCGCCGTGAGGTCGCCGCGACACAAATTATTGCCAATAAGCAGATTGATCGGACCTTTGCATTTGACAAGGTGTTTGGTCCAGCATCGAAGCAGAAGGATTTGTTTGAGCAATCTATCTCACCAATAGTAAATGAGGTCCTTGAGGGCTATAATTGCACAATTTTTGCTTATGGGCAAACTGGTACTGGGAAAACCTACACAATGGAGGGAGGTGGAACTAGAAAGACCAAGAATGGTGAACTCCCAACTGATGCTGGAGTTATCCCAAGGGCTGTTAGGCAAATCTTTGACATTCTTGAAGCCCAGTGCGCTGAGTACAGCATGAAAGTCACCTTCCTTGAGCTCTACAACGAAGAAATCACTGATTTGTTGGCCCCTGAAGAACCAAAGTTCCCTATTGTTCCTGAAGACAAGACAAAGAAGCCTATTGCCCTCATGGAAGATGGCAAAGGAGGCGTTTTTGTGAGAGGGCTTGAAGAAGAAGTCGTGTACTCCGCTGGTGAAATCTACAAAATTCTTGACAAGGGTTCTGCAAAGAGGCGCACTGCAGAGACACTGCTGAACAAGCAAAGTAGTAGGTCACACTCCATTTTCTCTATCACAATTCACATCAAGGAACTGACTCATGAGGGTGAGGAGATGATCAAAATTGGGAAGCTTAATCTAGTCGATCTAGCTGGTTCAGAAAATATCTCACGGTCAGGTGCTAGAGATGGCAGAGCGAGAGAGGCTGGGGAGATCAACAAGAGCTTGCTGACACTTGGTCGAGTCATCAATGCTCTTGTTGAACACTCTGGACATGTCCCATACAGAGATAGCAAACTGACAAGATTGCTAAGAGACTCATTGGGAGGGAAAACAAAGACTTGCATTATTGCCACAATATCACCTTCAGTATATTGTTTGGAAGAGACACTGAGCACACTGGACTATGCACACCGTGCTAAAAATATCAAGAACAAGCCTGAGGTGAACCAAAGGATGATGAAATCTGCTGTGATCAAGGACCTGTACTCTGAAATTGACCGTCTTAAGCAAGAGGTGTTTGCTGCAAGAGAGAAGAATGGTATATACATTCCAAGAGAACGCTACCTCCAAGAGGAAGCCGAGAAAAAGGCCATGACAGAGAAAATTGAGCGTCTGGGAGCTGATTTAGAGGCTAGGGATAAGCAATTGGTTGAACTAAAAGAGCTTTATGATGCTGAACAACTTTTGAGTGCAGAGTTGAGTGAAAAACTCGGGAAGACGCAGAAAGATCTGGAGGACACCAAGAATGTTCTGCATGATTTAGAAGAAAAATACAATGAAGCAGAGTCAACCATTAAGGAAAAGGAATATGTCATCTTTAATTTATTAAAGTCAGAAAAATCACTGGTAGACTGTGCATATAACCTCCGTGCGGAATTGGAAAATGCAGCAGCAGATGTTTCAGGGCTATTTTCCAAAATAGAGCGTAAAGACAAGATAGAAGATGGGAACAGGTCACTCGTGCAGAGATTTAGATCTCAACTGACCAATCAGCTGGATACCTTGCATAAAACTGTGTCCACCTCAGTCATGCAGCAGGAGAATCACCTCAAAGAAATGGAAGATGATATGCAATCCTTTGTATCTTCAAAAGATGAGGCTGCTCAAGGGCTAAGGGAGAGCATACAAAAGTTGAAACTTCTCCATGGTTCAGGCATTACAGCTTTGGATAGTTTAGCAGGTGAAATTGACATGAACTCTCAGTCAACATTTGAGAGATTGAACTCGCAAGTGCAATCACACACGTCATCTCTTGAGCAATGTTTTGGAGGAATTGCTTCAGAAGCAGACAATTTGTTAAATGAGCTTCAGTGTAGCCTTTCTAAACAAGAAGAGAGGTTAACCCAATTTGCAAAGAAGCAGCGGGAGGGACACTTACGAGCTGTGGAAGCATCACGGTCCATCTCAAAGATCAC TGCTGGTTTCTTCAGCTCAC TTGATGTTCATGCATCTAAGCTCACGAGTATTTTGGAAGAAACGCAAAGTGTGCAAGATCAACAACTTCTTGACCTTGAGAAGAAATTTGAGGAGTGTGCAGCTAATGAAGAAAAACAACTTCTAGAGAAGGTGGCAGAGATGCTTGCAAGTTCCCATGCAAGGAAGAAGAAGCTGGTCCAAACAGCAGTAGGTAACCTTCGAGAGAGCGCTGTAAACCGCACAAGTCACCTACAGAATGAAATTTCAACTGCCCAGGACTTCACTTCGTCCGTGCGGGAAAAGTGGGGCTTTTACATGGAAGAAACTGAGAAGAATTACATTGAAGATACCACTGCAGTGGACAGTGGAAGGTCGTGCTTGGCAGAAGTGCTTGTGGAATGTAAGGCAAAGACAACCATGGGTGCACAACAGTGGAAGAACGCCGAGGACTCTCTTTTCAGCCTTGGCAAAGGAAATGTGGAATCGGCAGATTCAATAGTCAGGACTGGAACCGAGGCTAACCAATCGCTGCGTTCCAAATTGTCGTCTGCGGTATCAACTACCCTTGAAGAAATAGATATAGCAAACAAGGCCCTTCTTTCTTCCATCGACAGTTCACTAAAACTTGACCATGATGCGTGCGCAAACATTGGCTCCATAATCAAACCATGCCATGAGGAAATAAGCGAGTTGAAGGGAGGACATTACCACAGGGTTGTTGAGATTACTGAAAATGCTGGGAAATGCCTAGAGGAAGAATATCTGGTGGATGAACCATCATGTTCGACTCCGAGAAGGCGGCAAATCGACCTGCCAAGCATGGAATCCATTGAGCAGTTGCGAACCCCGGATTACGATGAGCTTCTCAAATCATTCCGAGAGTCGAGGGCGAGTTTGAAGCAGGCAAATGGAGACATGAAGCATTTCTTAGAGGTGCAAGAAGCTACACCACCATCAATCACAGACCCGAGAGCTCCTCTTATAGCAAGAAATTAGATTTATAGAGTGAATGTACAAAAGGAACAAATTGTTTAGCTTTGATTTTTGGGGTATTGATTTACTGTTGATAGTGCCATTCGATTTATTGCTGCTGTTGGTTGGGATGGGAGGTCTGAAGCTGATCTGTTTGTAGAGATCAGTAGAAAGGCATGTGTATTTACTACTGCATAATTGAGGATAATGTTAGCTCTAGTGTAATATATATCCACACAGGTAACAATGACAAGTGCTAGTACAGATTTGACTCAGATAATCTTCCATGCTTTGCTGCAAATTTGAACAATTATTAGAAGCAAAAGGAAAGGAATT] [+] EMBL C25877 [ ATGCAGCAGGAGAATCACCTCAAAGAAATGGAAGATGATATGCAATCCTTTGTATCTTCAAAAGATGAGGCTGCTCAAGGGCTAAGGGAGAGCATACAAAAGTTGAAACTTCTCCATGGTTCAGGCATTACAGCTTTGGATAGTTTAGCAGGTGAAATTGACATGAACTCTCAGTCAACATTTGAGAGATTGAACTCGCAAGTGCAATCACACACGTCATCTCTTGAGCAATGTTTTGGAGGAATNGCTTCAGAAGCAGACAATTTGTTAAATGAGCTTCAGTGTAGCCTTTCTAAACAAGAAGAGAGGTTAACCCAATTTGCAAAGAAGCAGCGGGAGGGACACTTACGAGCTGTGGAAGCATCACGGTCCATCTCAAAGATCACTTGCTTGTTTCTTCAGCTCACTTTGATGTTCATGCATCTAAGCTCACGgag ] [+] EMBL AU092148 [ CTTTCTTCCATCGACAGTTCACTAAAACTTGCCCATGATGCGTGCGCAAACATTGGCTCCATAATCAANCCNTGCCATGAGGAAATAAGCGAGTTGAAGGGAGGACATTNCCACAGGGTTGTTGAGATTACTGAAAATNCTGGGAAATGCCTAGAGGAAGAATATCTGGTGGATGAACCATCATGTTCGACTCCGAGAAGGCGGCAAATCGACCTGCCAAGCATGGAATCCATTGAGCAGTTGCGAACCCCGGATTACGATGAGCTTCTCAAATCATTCCGAGAGTCGAGGGCGAGTTTGAAGCAGGCAAATGGAGACATGAAGCATTTCTTAGAGGTGCAAGAAGCTACACCACCATCAATCACAGACCCGAGAGCTCCTCTTATAGCAAGAAATTAGATTTATAGAGTGAATGTACAAAAGGAACAAATTGTTTAGCTTTGATTTTTGGGGTATTGATTTACTGTTGATAGTGCCATTCGATTTATTGCTGCTGTTGGTTGGGATGGGAGGTCTGAAGCTGATCTGTTTGTAGAGATCAGTAGAAAGGCATGTGTATTTACTACTGCATAATTGAGGATAATGTTAGCTCTAGTGTAATATATATCCACACAGGTAACAATGACAAaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||