These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5530#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 4124 fasta sequence [AGTTTTACTGTGCGCCGGCGGCGGCAGCGGCGATGGCCGCGCGCGGCGGAGGCGGGCGACCGCCGGCGTCGCGCCGCCGTAGACGGAAGCCGCGGGGAGGGAGGATGGAGCGGGTTTCTACTCCCGCTCGTCTCCGCCGGCCGCCACGGCTGGATGCCGCCGAGTGGTTTGATATCCCAGGTGAACACATGTCCG-CTCCAGATGAAAAGGCGCCTACTGAGGTTGCAGGCATGCCCTTTTCTTGGGATATGCAGTCTGAAGCAGCCAAATATTTTGGAAACTTTGACACAGAGATCCAAGCTTCTTGTCAGACTCAAGAACCATCATACAGAGCCATTTATGGAAGCTGCAATTCTGG-CCAAATGATTGGACTAGGGGATTCACAATATAAACTGGCTGGGTCATCCTCATCTCAAAGCCTCTATAGTGATAACTTCTCTGATGCCACTGGATTCAACCAGCTGAAGCTTCAAAAACAAACAAGTGCTGATGGAAACACCGAATCCTGGTCAGAACTGAACAGAGATGCCATTGGAGGTTTATCAGGTAAAGGGAGTCCACTAGCCAAATCAGGAAAGCAGCTTGAGCAACGTATGGCGAAGGCTCTTTCTGCTCAGCCATACCACCCTGTATTTCCTGTGACTCAAGGTGTTAGTTCCAGCAATTCATCTTCCCAACATGTTGTGAGTTCATCAGGAGAGGCCAAATATATTGGAAATTCTGGTCAAGAAATGCAAGTTGCTTGTGAAACTGCAAAAGAACCATCACATAGAGCCTTATATGGAAGCAAAAACCCTTATCAACTGACTGGACTCAGTGATCTCCGTGATAAAATCATTGCCTCATCTTCATTTGAAGGAGTCAATACTGGTAGCCTCACTAGCACTTTGTCAGGGATGAACTTGCCAACCAACAGTGCTAAAGAAAACACTGAATACAACCAACTGAAGCTTCAGAAACAAATAGATGGTTATCAGAGGTTTGAATCAGGCTCAGGATTAAACAGGGATGATGCTGGAGATATAACTGTAACAGGAGTTCCACAACAAGTGCAGGTTGGGCAAAACATGGTAAATGCTCTTTCTGCTAAGCCCTACCATCCTGTGTTTTCTGTCTCACATGGTACAAGTGCCAGTTCATCTTCACAACACCCATATATGGCGAGACAGTTGCTAGAGCACCCTGAATACAATCCAAGGATGCATCGCACCCATCCTTCATTGCAACCAACAATCGAAGCTGCATCCACCTCAATGACATCCCATGTTAAAGAGCCCTGTTACCAAGAAAATGTTGGGGATAGCAACCCAGGTATGTCCCTGCTTCGCAGCACAGCTGTTTCCTCCAGGGATGTAGAGAACAAATCTCCCAACCTGGGTGATAGGGTGCATGCTGATGTTTCGGAAATATACTCCACTTTGGATCACCAAACTTCAGCTAACAGCATGCAGATTCAGTATGCTCCTCAGGTTGTAAGGCAACCATCACAACAGTCCCTGCATTCTGATGTTACAGAAACATATTCAGCTTTTGGTCATCAGTCTGCAGCCAGCAATATACAGAGGCAGTTTGCTCCTCGGGTTACAAGACAAGCATCACACAGGTCCCTATATGAAAGCAGCAATAGCAGTCTATGGACTGGACCTCATGATGATTCCCAGATGGAACTGTTCAGGCCATCCTCGTCTCGCAGAATTAGTACTAATGTCATCTCTGGTGAATTGCCAAGGATCAACTTGCAGAGTGAGACAATGATGGGAAATGCTGATTTCAACCAGCAAAATCTTCGGAGACAAATTTCTCTCCGTGAAAACACTGAATCTCACTCTTTTGGCACATATAACGAGTTGCCAAGAACATCTTCCTTTTTGCGCCGTCAAAGCTCTGAATCCTCACAACTGAATAGTGCTTCTGTCAAATGTTCACCAGGTTCTGGTAGCTCATCAACCACGATGGGTCCTCCTCGCCCTTTCAATACAGTATCAGGAGGTGCCAGTTCTCTGCTAGGAAGTCCTCTTTCTTCCATGTCTGGAGGTTCAAGTTCTGGTGGTAATCCTGATCATCAGGGCACTGTTTTATCTTCAATATACCAACCAGATGGATACAATATTAATTCCACCTTGCCTCTAAGAATGAGAACACATGCAAGGGAGGCCTATGCCACATCTGTTCTACCTCAAGCCACAAGGCGAAGCCACCAAGTGAACTTTGATTCTGCAGAACGGAGACCCCAATATGTTCAACAAAGGGGTCTGGATGACACTATAAATTCAAACATGTTGAGTGCTCGGCAGCAGTTTCAGAGGCAGGTTGAAAGGCAGCTTCAGAGGCAACTTGAAAGGCAACTTCAGAGGCAACTTGAAAGGCAACTTCAGAGGCAGGTTCAAAGGCAGCTTCAGAGGCATCATGAGAGAGCAGCTGCATCTGAAGCACATCCATTTTATGGCAATGATGAGACTTCTGTCAGGATGAACCCAACTGAGGAATTTCTTGATATAGTAAAGGATCATGAAGCATTCTTCCTTTCATTTTATCATCCTTCTCGTATTCCAGCCCGTGTCATGAATACAGTAGATCAATGCTATGGTGTTGATATGGAAAGGGAGATGCCACATCAAGAGAGTCATCCAACACCTGGCTGTGGTACTGAGCTTTCTCATAAGAATGACACTTCAGGTTTTGAAAGATCTGATGTGGATGTCGCACACATACATGATTCCAAAAGGCTAAATAATGAGGAACTCAATGCCCTTCTATTACATAGGAAGTTCAGCAGCTTAAACAAAGGGAATTACCGGCTTTTTCACATAGAAGGCCATGTGCTTCAATGCAGCATTGATCAGTGTGGGAGCCGCTTTATACAGCAGAAGCTTCCAACAGCGACACCTGATGAGAAACTCATGGTCTTTAAAGAAATCATGCCTCATTTTCTTGAAATGGTGACTGATGTATTTGGAAATTATGTGCTGCAAAAGATGATCGAGCATGGAGCCCCATTTCAAAGAAGGGAAATTACAGCTTGCCTTTTTGGAAGTGTTCGAGCTTAAGCTGTCAACTATACGGGTGTCGAGTAGTCCAGAGGGCTGTAGAGCTTAGTGATCTAGATCAGAAGATACAGATTGCCAAGGAGCTCAATAGTAATATCATGAAATGTATACATGACCCAAATGCAAACCATGTTGTCCAGAAATGTATAGAGCATGTGCCACCACGATTCATACAGTTCTTTGTGGAGAGCATGTATGGGCGTGTTGTGGAGTTATCAGTCCATCCATACGGATGCCGTGTCATCCAGAGAATTCTGGAGTACTTTGATTCATCGATCCAGGAGATCTTTCTAGAAGAGATTATAGAGGAGGTTTACTATATGGCGAAAGATCAATACGCTAACTATGTTGTGCAGAACATATTGCAGCACGGGAAAGCCCTTGTGCGATCTGCAATTATAAAGAAATTTATTGGGAGAGTTGTGGCCATGAGCAAGCAAAAATTCGCCTCTAATGTCATTGAAAAGTGCTTAATATTTGGTAGCTATGATGAAAAACAGAAGATCATTAATGAGGTCATCGGCACAACGGACCTCGTCAGAAGTGGTGAAACCGAGGCTCTTGTGGTTATGGTGAACGACCAATATGCTAACTACGTTGTACAGAAGGTGATTGAAACCTGCGACGAGTGGCAGCGGAAGCTAATACTCAGGCGCTTGAGGGCGCACCACAGCCTGCTTCACGACTGCACCTATGCAAAGCACGTCGTGGCACGACTGGATAGGCTCATCGATATCGGGGAGCGCAAAATGGCGAATCCCAGGCGCCCCAGGCGACATGGGAAAGATCCTGTGCCACCACTGACCTAGAAATGAGCTCGAGTAAATCAGCTGAAGGGGACGACGGTGACCTCTGTCCACTGCTGCTTCTGTCTGCAGCTTACTGAATCCTACTACTGCGGTAAATTCGACGATCAATCGAGACTGCTGAGATGATGAACTGGTCATGAACTCTCTGTAATGTTAGTGAATAATGGATGTGAAGATCGAATGAACATTTGGATATCTGTAATGTCACTTGAACTCTGGTAACTGCGAGGTCTATTCTACCTGTGTTTGTAAGGGGAGGAGACTTTAC] [+] EMBL AK070567 [AGTTTTACTGTGCGCCGGCGGCGGCAGCGGCGATGGCCGCGCGCGGCGGAGGCGGGCGACCGCCGGCGTCGCGCCGCCGTAGACGGAAGCCGCGGGGAGGGAGGATGGAGCGGGTTTCTACTCCCGCTCGTCTCCGCCGGCCGCCACGGCTGGATGCCGCCGAGTGGTTTGATATCCCAGGTGAACACATGTCCG CTCCAGATGAAAAGGCGCCTACTGAGGTTGCAGGCATGCCCTTTTCTTGGGATATGCAGTCTGAAGCAGCCAAATATTTTGGAAACTTTGACACAGAGATCCAAGCTTCTTGTCAGACTCAAGAACCATCATACAGAGCCATTTATGGAAGCTGCAATTCTGG CCAAATGATTGGACTAGGGGATTCACAATATAAACTGGCTGGGTCATCCTCATCTCAAAGCCTCTATAGTGATAACTTCTCTGATGCCACTGGATTCAACCAGCTGAAGCTTCAAAAACAAACAAGTGCTGATGGAAACACCGAATCCTGGTCAGAACTGAACAGAGATGCCATTGGAGGTTTATCAGGTAAAGGGAGTCCACTAGCCAAATCAGGAAAGCAGCTTGAGCAACGTATGGCGAAGGCTCTTTCTGCTCAGCCATACCACCCTGTATTTCCTGTGACTCAAGGTGTTAGTTCCAGCAATTCATCTTCCCAACATGTTGTGAGTTCATCAGGAGAGGCCAAATATATTGGAAATTCTGGTCAAGAAATGCAAGTTGCTTGTGAAACTGCAAAAGAACCATCACATAGAGCCTTATATGGAAGCAAAAACCCTTATCAACTGACTGGACTCAGTGATCTCCGTGATAAAATCATTGCCTCATCTTCATTTGAAGGAGTCAATACTGGTAGCCTCACTAGCACTTTGTCAGGGATGAACTTGCCAACCAACAGTGCTAAAGAAAACACTGAATACAACCAACTGAAGCTTCAGAAACAAATAGATGGTTATCAGAGGTTTGAATCAGGCTCAGGATTAAACAGGGATGATGCTGGAGATATAACTGTAACAGGAGTTCCACAACAAGTGCAGGTTGGGCAAAACATGGTAAATGCTCTTTCTGCTAAGCCCTACCATCCTGTGTTTTCTGTCTCACATGGTACAAGTGCCAGTTCATCTTCACAACACCCATATATGGCGAGACAGTTGCTAGAGCACCCTGAATACAATCCAAGGATGCATCGCACCCATCCTTCATTGCAACCAACAATCGAAGCTGCATCCACCTCAATGACATCCCATGTTAAAGAGCCCTGTTACCAAGAAAATGTTGGGGATAGCAACCCAGGTATGTCCCTGCTTCGCAGCACAGCTGTTTCCTCCAGGGATGTAGAGAACAAATCTCCCAACCTGGGTGATAGGGTGCATGCTGATGTTTCGGAAATATACTCCACTTTGGATCACCAAACTTCAGCTAACAGCATGCAGATTCAGTATGCTCCTCAGGTTGTAAGGCAACCATCACAACAGTCCCTGCATTCTGATGTTACAGAAACATATTCAGCTTTTGGTCATCAGTCTGCAGCCAGCAATATACAGAGGCAGTTTGCTCCTCGGGTTACAAGACAAGCATCACACAGGTCCCTATATGAAAGCAGCAATAGCAGTCTATGGACTGGACCTCATGATGATTCCCAGATGGAACTGTTCAGGCCATCCTCGTCTCGCAGAATTAGTACTAATGTCATCTCTGGTGAATTGCCAAGGATCAACTTGCAGAGTGAGACAATGATGGGAAATGCTGATTTCAACCAGCAAAATCTTCGGAGACAAATTTCTCTCCGTGAAAACACTGAATCTCACTCTTTTGGCACATATAACGAGTTGCCAAGAACATCTTCCTTTTTGCGCCGTCAAAGCTCTGAATCCTCACAACTGAATAGTGCTTCTGTCAAATGTTCACCAGGTTCTGGTAGCTCATCAACCACGATGGGTCCTCCTCGCCCTTTCAATACAGTATCAGGAGGTGCCAGTTCTCTGCTAGGAAGTCCTCTTTCTTCCATGTCTGGAGGTTCAAGTTCTGGTGGTAATCCTGATCATCAGGGCACTGTTTTATCTTCAATATACCAACCAGATGGATACAATATTAATTCCACCTTGCCTCTAAGAATGAGAACACATGCAAGGGAGGCCTATGCCACATCTGTTCTACCTCAAGCCACAAGGCGAAGCCACCAAGTGAACTTTGATTCTGCAGAACGGAGACCCCAATATGTTCAACAAAGGGGTCTGGATGACACTATAAATTCAAACATGTTGAGTGCTCGGCAGCAGTTTCAGAGGCAGGTTGAAAGGCAGCTTCAGAGGCAACTTGAAAGGCAACTTCAGAGGCAACTTGAAAGGCAACTTCAGAGGCAGGTTCAAAGGCAGCTTCAGAGGCATCATGAGAGAGCAGCTGCATCTGAAGCACATCCATTTTATGGCAATGATGAGACTTCTGTCAGGATGAACCCAACTGAGGAATTTCTTGATATAGTAAAGGATCATGAAGCATTCTTCCTTTCATTTTATCATCCTTCTCGTATTCCAGCCCGTGTCATGAATACAGTAGATCAATGCTATGGTGTTGATATGGAAAGGGAGATGCCACATCAAGAGAGTCATCCAACACCTGGCTGTGGTACTGAGCTTTCTCATAAGAATGACACTTCAGGTTTTGAAAGATCTGATGTGGATGTCGCACACATACATGATTCCAAAAGGCTAAATAATGAGGAACTCAATGCCCTTCTATTACATAGGAAGTTCAGCAGCTTAAACAAAGGGAATTACCGGCTTTTTCACATAGAAGGCCATGTGCTTCAATGCAGCATTGATCAGTGTGGGAGCCGCTTTATACAGCAGAAGCTTCCAACAGCGACACCTGATGAGAAACTCATGGTCTTTAAAGAAATCATGCCTCATTTTCTTGAAATGGTGACTGATGTATTTGGAAATTATGTGCTGCAAAAGATGATCGAGCATGGAGCCCCATTTCAAAGAAGGGAAATTACAGCTTGCCTTTTTGGAAGTGTTCGAGCTTAAGCTGTCAACTATACGGGTGTCGAGTAGTCCAGAGGGCTGTAGAGCTTAGTGATCTAGATCAGAAGATACAGATTGCCAAGGAGCTCAATAGTAATATCATGAAATGTATACATGACCCAAATGCAAACCATGTTGTCCAGAAATGTATAGAGCATGTGCCACCACGATTCATACAGTTCTTTGTGGAGAGCATGTATGGGCGTGTTGTGGAGTTATCAGTCCATCCATACGGATGCCGTGTCATCCAGAGAATTCTGGAGTACTTTGATTCATCGATCCAGGAGATCTTTCTAGAAGAGATTATAGAGGAGGTTTACTATATGGCGAAAGATCAATACGCTAACTATGTTGTGCAGAACATATTGCAGCACGGGAAAGCCCTTGTGCGATCTGCAATTATAAAGAAATTTATTGGGAGAGTTGTGGCCATGAGCAAGCAAAAATTCGCCTCTAATGTCATTGAAAAGTGCTTAATATTTGGTAGCTATGATGAAAAACAGAAGATCATTAATGAGGTCATCGGCACAACGGACCTCGTCAGAAGTGGTGAAACCGAGGCTCTTGTGGTTATGGTGAACGACCAATATGCTAACTACGTTGTACAGAAGGTGATTGAAACCTGCGACGAGTGGCAGCGGAAGCTAATACTCAGGCGCTTGAGGGCGCACCACAGCCTGCTTCACGACTGCACCTATGCAAAGCACGTCGTGGCACGACTGGATAGGCTCATCGATATCGGGGAGCGCAAAATGGCGAATCCCAGGCGCCCCAGGCGACATGGGAAAGATCCTGTGCCACCACTGACCTAGAAATGAGCTCGAGTAAATCAGCTGAAGGGGACGACGGTGACCTCTGTCCACTGCTGCTTCTGTCTGCAGCTTACTGAATCCTACTACTGCGGTAAATTCGACGATCAATCGAGACTGCTGAGATGATGAACTGGTCATGAACTCTCTGTAATGTTAGTGAATAATGGATGTGAAGATCGAATGAACATTTGGATATCTGTAATGTCACTTGAACTCTGGTAACTGCGAGGTCTATTCTACCTGTGTTTGTAAGGGGAGGAGACTTTAC] [-] EMBL AA749545 [ TGAACACATGTCCGTCTCCAGATGAAAAGGNGCCTACTGACCTTGCA GCATGCCCTTTTCTTGGGATATGCAGTCTGAAGCAGNCAAATATTTTGGAAACTTTGACACAGAGATCCAAGCTTCTTGTCAGACTCAAGAACCATCATACAGAGCCATTTATGGAAGCTGCAATTCTGGACCAAATGATTGGACTAGGGNATTCACAATATAAACTGGCTGGGTCA ] [-] EMBL AK060435 [ CAGCCAGCAATATACAGAGGCAGTTTGCTCCTCGGGTTACAAGACAAGCATCACACAGGTCCCTATATGAAAGCAGCAATAGCAGTCTATGGACTGGACCTCATGATGATTCCCAGATGGAACTGTTCAGGCCATCCTCGTCTCGCAGAATTAGTACTAATGTCATCTCTGGTGAATTGCCAAGGATCAACTTGCAGAGTGAGACAATGATGGGAAATGCTGATTTCAACCAGCAAAATCTTCGGAGACAAATTTCTCTCCGTGAAAACACTGAATCTCACTCTTTTGGCACATATAACGAGTTGCCAAGAGCATCTTCCTTTTTGCGCCGTCAAAGCTCTGAATCCTCACAACTGAATAGTGCTTCTGTCAAATGTTCACCAGGTTCTGGTAGCTCATCAACCACGATGGGTCCTCCTCGCCCTTTCAATACAGTATCAGGAGGTGCCAGTTCTCTGCTAGGAAGTCCTCTTTCTTCCATGTCTGGAGGTTCAAGTTCTGGTGGTAATCCTGATCATCAGGGCACTGTTTTATCTTCAATATACCAACCAGATGGATACAATATTAATTCCACCTTGCCTCTAAGAATGAGAACACATGCAAGGGAGGCCTATGCCACATCTGTTCTACCTCAAGCCACAAGGCGAAGCCACCAAGTGAACTTTGATTCTGCAGAACGGAGACCCCAATATGTTCAACAAAGGGGTCTGGATGACACTATAAATTCAAACATGTTGAGTGCTCGGCAGCAGTTTCAGAGGCAGGTTGAAAGGCAGCTTCAGAGGCAACTTGAAAGGCAACTTCAGAGGCAACTTGAAAGGCAACTTCAGAGGCAGGTTCAAAGGCAGCTTCAGAGGCATCATGAGAGAGCAGCTGCATCTGAAGCACATCCATTTTATGGCAATGATGAGACTTCTGTCAGGATGAACCCAACTGAGGAATTTCTTGATATAGTAAAGGATCATGAAGCATTCTTCCTTTCATTTTATCATCCTTCTCGTATTCCAGCCCGTGTCATGAATACAGTAGATCAATGCTATGGTGTTGATATGGAAAGGGAGATGCCACATCAAGAGAGTCATCCAACACCTGGCTGTGGTACTGAGCTTTCTCATAAGAATGACACTTCAGGTTTTGAAAGATCTGATGTGGATGTCGCACACATACATGATTCCAAAAGGCTAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||