These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5559#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2486 fasta sequence [ATTCCCCCGCCTCATCTCCTCTCCTCTCCTCCCCCCTGCTTCTCCGACCAAAGCCGCGCCGCGCATTCCGCCGCCATGTCCGCCGCGCTCCACACGCTCCCCGCCGTCGCCGCTGGCGGCCTCGGCTGTCGGTGGCGGCGGCCCTCCGCGACGCTACGGGCGGCGAGCTCCGTGGGGACGGCGTCGGTGGCGGTGTCCGTGAATGCGGAGACGCAGCAGCAGCGGCAGGTGGGTGTGGAGGAGGAGGAGAAGAGGAGGGAGGATGCGGCGGAGGTGAGGACGGGCAGGGTGGTGGAGGCTCTCTACGACGACGGGTTCGGCGGCGTCACGGTGAAGGACTACTTCGCGGCGGCCAGGGCCGTCTCCAGCGACGACGGCGGCCCGCCGCGGTGGTTCTGCCCCGTCGACGCCGGCCGGCCGGCCGGTGGACAACGCGCCGCTGCTGCTCTTCTTGCCAGGAACTGATGGTGTTGGAATGGGGCTCATTTTGCACCACAAGTCTTTGGGAAGGGTATTCGAGGTTCGCTGCTTGCATATACCAGTGAATGATCGTACGCCATTTGAAGGGTTGTTGCAGATTGTGGAAAATTCTATCAAATATGAGCATGCTATGTCACCAAACCGACCCATATATCTCATCGGGGACTCATTTGGAGGATGCCTAGCACTTTCGGTGGCAGCTCGTAATCCACAAATTGATCTGGTTCTCATACTGATTAATCCAGCAACGTCCTTTGCAAAGACTCCGTTGCAGCCGATATTACCTGTGTTGGAAGCAATGCCAAGTGAACTTCATGTCACAGTTCCATATCTTCTCAGTTTTGTCATGGGCGATCCTCTTAAAATGGCTATGGTCAGCGTTGAGAACAACCTTTCTCCTCCAAAAACTCTGCAGAAGTTGTCAGATAGTCTCACTTCCATGCTGCCTTTGCTTTCAGAATTGGCAGATATCATACCAAGGGATACTCTTTTCTGGAAACTCAAGCTGCTGAAGTCAGGAGCAGCCTACGCTAACTCTCGTCTTCATGCTGTACAAGCTGAAGTTCTACTTCTTGCTAGTGGCAATGATAATCTTCTGCCAAGTGGAGAAGAGGCAGATAGACTCTTCAAATCACTGAAAAACTGCAGAGTTCGGTACTTCAAAGACAATGGCCATACACTACTGTTGGAGGACGGTGTTAATCTTTTATCAGTCATAAAAGGAGTAAATATGTACCGCCGTGGCAGACAACGGGATCCTGTGACGGATTACATTCCCCCGACATTGAGTGAGTTCAAGAAAACATTCGATGAAGATCACAAATTGTTTCACCTTGCATTGAGCCCAGTCATGCTGTCTACCCTGAAGAATGGGAAGATTGTTCGTGGCCTTACTGGTGTTCCTGACCAAGGTCCTGTCTTGTTTGTGGGTTATCATGCACTGATGGGGATCGAGTTGAGTCCATTGTACGAGGAGTTCTTGAGAGAGAAGAGAACAAGTTTCCGTGGTATGGCTCACCCAATTTTATTTGGAGGAAAACATGAGAGTTCGCGACAGGAGCTGTCTCGGTTCGATACAATTTCTATGTACGGTGGATTACCAGTCACTGCGATCAATATGTATAGGTTGTTTGAGAGAAATCAATTTGTTTTGCTCTATCCAGGCGGTGTGCGGGAAGCTCTTCACAGGAAGGGTGAAGCATACAAGTTGTTTTGGCCAGACCAACCAGAATTTGTAAGAATGGCAGCACGTTTTGGTGTTACTATCATACCATTTGGTTTTGTAGGAGAAGATGATGTTTTAGAGTTGGTCGCCGACTACAATGATCAAAAGAACATTCCCTACCTTCGGGAATGGATTGAGTCGATTAACCGAGAAGCCAAAAGAGTAAGGGATAGCGTCAAAGGAGAGGATGGAAATCAAGACGTTCACATACCTGCTTTGCTCCCCAAAGTGCCAGGCCGGTTCTACTACCTATTTGGCAAACCAATCGAAATGAAAGGTATGGATAATGTCGTCAGAGATAGGAAAAGTGCAAACGAAGTGTATTT-GCATATCAAATCCGAA-GTAGAGAGCTTAATGTCATATCTGAAGAGGAAGAGGGAGGAAGATCCTTACAGAAGCATAGCGCAGCGTGCAGTGTACCAGGCATCTTGGGGTGCTTCTG-CAGAGGTCCCAACATTTGAACCA-TGAAGGTTGGGTGATCTCGTGGTACTGTGATTGAATGAGCATCGGCAATCTTGTGTTCCGAAGCAAACATGGAAAGGGGGTATTATCTGTTGGAAGTAAATAGCATTTTCAGTAGGCTGGCTGCAAGCCTGCAACTCTTGAATCAGTTACACA-TTTTGATGGAACATACCCCCAAATAGGCCA-TTATA-CAAGTGTATAGTAAAGTAGAACAGATATATCTGAACAGTTTTTTTTTTGTTATATATTTTAACCAATGTATAGTGATTGATATACAGACTAGTTACTGATGAATGGAATTCTTGCTCATAAAAAAAAA] [+] EMBL AK065319 [ATTCCCCCGCCTCATCTCCTCTCCTCTCCTCCCCCCTGCTTCTCCGACCAAAGCCGCGCCGCGCATTCCGCCGCCATGTCCGCCGCGCTCCACACGCTCCCCGCCGTCGCCGCTGGCGGCCTCGGCTGTCGGTGGCGGCGGCCCTCCGCGACGCTACGGGCGGCGAGCTCCGTGGGGACGGCGTCGGTGGCGGTGTCCGTGAATGCGGAGACGCAGCAGCAGCGGCAGGTGGGTGTGGAGGAGGAGGAGAAGAGGAGGGAGGATGCGGCGGAGGTGAGGACGGGCAGGGTGGTGGAGGCTCTCTACGACGACGGGTTCGGCGGCGTCACGGTGAAGGACTACTTCGCGGCGGCCAGGGCCGTCTCCAGCGACGACGGCGGCCCGCCGCGGTGGTTCTGCCCCGTCGACGCCGGCCGGCCGGCCGGTGGACAACGCGCCGCTGCTGCTCTTCTTGCCAGGAACTGATGGTGTTGGAATGGGGCTCATTTTGCACCACAAGTCTTTGGGAAGGGTATTCGAGGTTCGCTGCTTGCATATACCAGTGAATGATCGTACGCCATTTGAAGGGTTGTTGCAGATTGTGGAAAATTCTATCAAATATGAGCATGCTATGTCACCAAACCGACCCATATATCTCATCGGGGACTCATTTGGAGGATGCCTAGCACTTTCGGTGGCAGCTCGTAATCCACAAATTGATCTGGTTCTCATACTGATTAATCCAGCAACGTCCTTTGCAAAGACTCCGTTGCAGCCGATATTACCTGTGTTGGAAGCAATGCCAAGTGAACTTCATGTCACAGTTCCATATCTTCTCAGTTTTGTCATGGGCGATCCTCTTAAAATGGCTATGGTCAGCGTTGAGAACAACCTTTCTCCTCCAAAAACTCTGCAGAAGTTGTCAGATAGTCTCACTTCCATGCTGCCTTTGCTTTCAGAATTGGCAGATATCATACCAAGGGATACTCTTTTCTGGAAACTCAAGCTGCTGAAGTCAGGAGCAGCCTACGCTAACTCTCGTCTTCATGCTGTACAAGCTGAAGTTCTACTTCTTGCTAGTGGCAATGATAATCTTCTGCCAAGTGGAGAAGAGGCAGATAGACTCTTCAAATCACTGAAAAACTGCAGAGTTCGGTACTTCAAAGACAATGGCCATACACTACTGTTGGAGGACGGTGTTAATCTTTTATCAGTCATAAAAGGAGTAAATATGTACCGCCGTGGCAGACAACGGGATCCTGTGACGGATTACATTCCCCCGACATTGAGTGAGTTCAAGAAAACATTCGATGAAGATCACAAATTGTTTCACCTTGCATTGAGCCCAGTCATGCTGTCTACCCTGAAGAATGGGAAGATTGTTCGTGGCCTTACTGGTGTTCCTGACCAAGGTCCTGTCTTGTTTGTGGGTTATCATGCACTGATGGGGATCGAGTTGAGTCCATTGTACGAGGAGTTCTTGAGAGAGAAGAGAACAAGTTTCCGTGGTATGGCTCACCCAATTTTATTTGGAGGAAAACATGAGAGTTCGCGACAGGAGCTGTCTCGGTTCGATACAATTTCTATGTACGGTGGATTACCAGTCACTGCGATCAATATGTATAGGTTGTTTGAGAGAAATCAATTTGTTTTGCTCTATCCAGGCGGTGTGCGGGAAGCTCTTCACAGGAAGGGTGAAGCATACAAGTTGTTTTGGCCAGACCAACCAGAATTTGTAAGAATGGCAGCACGTTTTGGTGTTACTATCATACCATTTGGTTTTGTAGGAGAAGATGATGTTTTAGAGTTGGTCGCCGACTACAATGATCAAAAGAACATTCCCTACCTTCGGGAATGGATTGAGTCGATTAACCGAGAAGCCAAAAGAGTAAGGGATAGCGTCAAAGGAGAGGATGGAAATCAAGACGTTCACATACCTGCTTTGCTCCCCAAAGTGCCAGGCCGGTTCTACTACCTATTTGGCAAACCAATCGAAATGAAAGGTATGGATAATGTCGTCAGAGATAGGAAAAGTGCAAACGAAGTGTATTT GCATATCAAATCCGAA GTAGAGAGCTTAATGTCATATCTGAAGAGGAAGAGGGAGGAAGATCCTTACAGAAGCATAGCGCAGCGTGCAGTGTACCAGGCATCTTGGGGTGCTTCTG CAGAGGTCCCAACATTTGAACCA TGAAGGTTGGGTGATCTCGTGGTACTGTGATTGAATGAGCATCGGCAATCTTGTGTTCCGAAGCAAACATGGAAAGGGGGTATTATCTGTTGGAAGTAAATAGCATTTTCAGTAGGCTGGCTGCAAGCCTGCAACTCTTGAATCAGTTACACA TTTTGATGGAACATACCCCCAAATAGGCCA TTATA CAAGTGTATAGTAAAGTAGAACAGATATATCTGAACAGTTTTTTTTTTGTTATATATTTTAACCAATGTATAGTGATTGATATACAGACTAGTTACTGATGAATGGA ] [-] EMBL CA305820 [ TGTTGCAGATTGTGGAAAATTCTATCAAATATGAGCATGCTATGTCACCAAACCGACCCATATATCTCGTCGGGGACTCATTTGGAGGATGCCTAGCACTTTCGGTGGCAGCTCGTAATCCACAAATTGATCTGGTTCTCATACTGATTAATCCAGCAACGTCCTTTGCAAAGACTCCGTTGCAGCCGATATTACCTGTGTTGGAAGCAATGCCAAGTGAACTTCATGTCACAGTTCCATATCTTCTCAGTTTTGTCATGGGCGATCCTCTTAAAATGGCTATGGTCAGCGTTGAGAACAACCTTTCTCCTCCAAAAACTCTGCAGAAGTTGTCAGATAGTCTCACTTCCATGCTGCCTTTGCTTTCAGAATTGGCAGATATCATACCAAGGGATACTCTTTTCTGGAAACTCAAGCTGCTGAAGTCAGGAGCAGCCTACGCTAACTCTCG ] [+] EMBL BI811962 [ GAAA GTATGGATAATGTCGTCAGAGATAGGAAAAGT CCAACGAAGTGTATTTGGCATATCAAATCCGAATGTAGAGAGCTTAATGTCATATCTGAAGAGGAAGAGGGAGGAAGATCCTTACAGAAGCATAGC CAGCGTCCAGTGTACCAGGCATCTTGGGGTGCTTCTGCCAGAGGTCCCAACATTTGAACCACTGAAGGTTGGGTGATCTCGTGGTACTGTGATTGAATGAGCATC GC ATCTTGTGTTCCGAA CAAACATGGAAAGGGGGTATTATCTGTTGGAAGTAAATAGCATTTTCAGTAGGCTGGCTGCAAGCCTGCAACTCTTGAATCAGTTACACACTTTTGATGGAACATACCCCC AATAGGCCACTTATACCAAGTGTATAGTAAAGTAGAACAGATATATCTGAAC GTTTTTTTTTTGTTATATATTTTAACC ATGTATAGTGATTGATATACAGACTAGTTACTGATGAATGGAATTCTTGCTCATAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||