These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5562#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3513 fasta sequence [TCCTTGCGCAAATCTCGAAGCAGGGGCAGCGTCAAGCCGTCAACCCGGCTCCTGGCAAAGGAGCAGAGCCGAGATCCCCCAGCAATGGCGGCGGCGCAGTGAGCTCGCCGCCGATTGCCAACATGCGGGCGACGCCACCGCCGCCGCCGCGTCCCCCGGCTCGCGCGTACCCAGGAACGTCTCCCATGGGCTCGTCTCCAGCCTTGCCGCGCTCCACCAACCCGGCGGCGCTCCTCGCCCACCTCGCCGCCGTCCTCACCTCGCCCGACTGGTTCCTCAACCCTTCCCTGCCCCGCCTCCCTGCCCTGCTCACGCCGTCCCTGCCGGAGTCGCTCCCCGTCCCGCTCCCCGTCCGCCTCGCCGCCGCGGCGGCCAGGGTGGCCGCGCCGTCCCGCCACCTCCTCGCCGTCGCGCTCCCGGTCGTCCTCCGCCTCCACTCCCTCTCGCCCCCGCCGCTCCGCCCGCTCTTCGACCGCCCCTTCGCCTCCCTCCTCGCCCACCTCTCCCGCTTCGCCCTCGCGCCGCTCGCCCTCCGCCTCTTCGCCCACATGCACCGCCACGCCCCGCCGGCGCCGACAGCCCCCACCTACAACGCCGTCATCCGCTCCCTCTGCCGCCGCGCCGACCTCGCCCGCGCCCTGCGGTACCTCAGCCTCATGGTCCGCTCCGGCTGGCGCCCCGACGCCTACACGTTCAACTCCCTCATCGTCGGGTATTGCCGCACCAACCAGGTCGACGTTGCCCGCGACCTGTTCGACAAAATGCCCCTGAGAGGGTTCGCCCAGGACGTGGTCTCTTACGCCACGCTGATTGAGGGGCTTTGTGAGGCGGGGAGGATTGACGAGGCAGTGGAGTTGTTCGGGGAGATGGACCAGCCAGACATGCACATGTATGCAGCCTTAGTGAAGGGGTTGTGTAATGCGGAGCGGGGGGAGGAGGGGCTTCTCATGCTGCGTAGGATGAAGGAATTGGGGTGGCGGCCAAGCACCCGTGCTTATGCAGCTGTGGTTGATTTCCGGTGTAGGGAGCGTAAGGCCAAGGAGGCTGAGGAAATGCTTCAGGAGATGTTTGAAAAGGGATTGGCACCGTGTGTTGTGACATGCACTGCGGTGATAAATGCATATTGTAAGGAGGGAAGGATGAGCGATGCATTGAGGGTGTTGGAGTTGATGAAGTTGAGGGGGTGCAAGCCAAATGTGTGGACATATAATGCATTGGTCCAAGGGTTCTGTAATGAAGGAAAGGTGCACAAGGCGATGACTTTGTTGAACAAGATGAGAGCATGTGGAGTCAACCCAGATGCTGTGACATATAATTTGTTGATTCGGGGCCAATGCATTGATGGACATATAGAGAGTGCTTTCCGATTGCTACGTTTGATGGAAGGAGATGGTTTAATTGCTGATCAGTACACATATAATGCGTTGATGAATGCTCTCTGCAAGGATGGAAGAACTGATCAAGCTTGCTCCCTTTTTGATAGTCTAGAAACTAGAGGCATAAAACCTAATGCCGTGACATTCAATTCCTTGATAAATGGGTTATGCAAGTCTGGTAAAGCTGATATTGCATGGAAATTTTTGGAAAAGATGGTTTCTGCAGGTTGCACACCCGATACTTACACATACAGTTCATTTATTGAACACCTATGCAAGATGAAGGGGTCACAAGAAGGTCTGTCCTTTATAGGGGAGATGCTACAAAAGGATGTGAAGCCCTCAACAGTCAATTATACAATTGTGATTCATAAGCTTTTAAAGGAGAGAAACTATGGATTGGTTGCGAGAACCTGGGGCGAAATGGTTTCATCAGGTTGCAATCCTGATGTAGTCACTTATACAACGTCTATGCGTGCTTACTGCATTGAAGGAAGACTAAATGAAGCAGAAAATGTTTTGATGGAGATGAGCAAAAATGGGGTCACTGTAGATACAATGGCATACAATACTCTGATGGATGGACATGCAAGTATTGGACAGACAGATCATGCAGTCTCAATCTTGAAACAAATGACAAGTGTTGCTTCTGTGCCAAACCAGTTTACTTATTTTATCTTGCTTAGACATCTTGTACGCATGAGATTAGTGGAGGATGTGTTGCCTTTGACCCCAGCTGGTGTGTGGAAAGCCATAGAGCTTACTGATGTCTTTGGGTTGTTTGATGTAATGAAGAAGAACGAATTTCTTCCTAATTCAGGAACTTATTCTTCCATTCTAGAGGGGTTTTCTGAAGATGGAAGAACGGAAGAGGCGACATCGTTAGTTTCTCTTATGAAAGAAGATAGTATATCTCTGAATGAAGACATCTATACTGCTCTCGTTACTTGTTTTTGCAAATCCAAAAGGTATTTGGATGCATGGGTGTTGGTTTGCTCTATGATTCAACATGGTTTTATACCACAGTTGATGTCCTACCAACATCTGCTTTCTGGGCTTATTTGTGAAGGACAAACAGATAAGGCTAAAGAAATATTCATGAATTCTAGATGGAAAGACTATAGTCCCGATGAGATTGTGTGGAAAGTGATTATTGATGGCCTGATAAAAAAAGGTCACTCAGATATATCCCGTGAAATGATTATCATGTTAGAGCGTATGAACTGCAGACCAAGTCATCAAACCTATGCAATGCTGACTGAGGAATTACCTGACAGGGAATAATATGCCACACAAGTCTCATTCATCACTCGAAGCGAAATCCCCATCAGCTGTGCAAACTGGCATCTCATTAGGTGCTGTTCAAGCACAAGGTGCACCAAGTGATGTGAAATGGATCATCCAACATACTCTCTCACACACAAAATGAGTTCACGCTCTATTTGCTCTCTGGAAGAGCAGTGATTATCAGATTTTTGAAGACTGATATGAGCGCAAAGCATTTGAATCCAGATTGTGTGTGTGCCTGTACTATATCAGGTCGACAGATAGTGTTTACAGATTTGTAGGAGCCAAAAGTCCCATACCGCTATGGCAGGCTTCGCTACTTTATTATTTTATTGATCTGAAGAGAGGTTGCCAAGTTTGATTCGACGATTTTGTCACGGATCTTCTGAGTTACTGTGTGGCACAATTTCTGATGCTGGTTGTTGAACCGATGAGTGATCTGATTTTTTTGGGTGGCAAGTATTGTTGCCAGTAAAATATATGGAAGGGCCGAAAGATTTGGAAATGCACTCAGCGATCAGTTTCAATAAATCATCAACATAGGAATTACTGGTCACAATCTGGGAAAG----AAAGGAATCTATTAACGGACGGCCAAGATTCCCTGGCCCACTCAAAACAGCGAAATGCACAAAGCCTCGATCGGCGTCTGACAGGCTGTCACGGACGTGGGCTCACAATCGGGCTTTCAGGCTGAATGTATGGCCCAGCCAGATAGGAAAGACAGCGTTATAAACCAAAGCCACGCTGCAGCCATAGCTGAGCACATGGAGGTGCCACATTTTGTCACACTAAATGTTACTCCATCCGTCTCATAATATAATATTTTAAGTTGATTTTTTTAAAAAAAAAA] [+] EMBL AK101861 [TCCTTGCGCAAATCTCGAAGCAGGGGCAGCGTCAAGCCGTCAACCCGGCTCCTGGCAAAGGAGCAGAGCCGAGATCCCCCAGCAATGGCGGCGGCGCAGTGAGCTCGCCGCCGATTGCCAACATGCGGGCGACGCCACCGCCGCCGCCGCGTCCCCCGGCTCGCGCGTACCCAGGAACGTCTCCCATGGGCTCGTCTCCAGCCTTGCCGCGCTCCACCAACCCGGCGGCGCTCCTCGCCCACCTCGCCGCCGTCCTCACCTCGCCCGACTGGTTCCTCAACCCTTCCCTGCCCCGCCTCCCTGCCCTGCTCACGCCGTCCCTGCCGGAGTCGCTCCCCGTCCCGCTCCCCGTCCGCCTCGCCGCCGCGGCGGCCAGGGTGGCCGCGCCGTCCCGCCACCTCCTCGCCGTCGCGCTCCCGGTCGTCCTCCGCCTCCACTCCCTCTCGCCCCCGCCGCTCCGCCCGCTCTTCGACCGCCCCTTCGCCTCCCTCCTCGCCCACCTCTCCCGCTTCGCCCTCGCGCCGCTCGCCCTCCGCCTCTTCGCCCACATGCACCGCCACGCCCCGCCGGCGCCGACAGCCCCCACCTACAACGCCGTCATCCGCTCCCTCTGCCGCCGCGCCGACCTCGCCCGCGCCCTGCGGTACCTCAGCCTCATGGTCCGCTCCGGCTGGCGCCCCGACGCCTACACGTTCAACTCCCTCATCGTCGGGTATTGCCGCACCAACCAGGTCGACGTTGCCCGCGACCTGTTCGACAAAATGCCCCTGAGAGGGTTCGCCCAGGACGTGGTCTCTTACGCCACGCTGATTGAGGGGCTTTGTGAGGCGGGGAGGATTGACGAGGCAGTGGAGTTGTTCGGGGAGATGGACCAGCCAGACATGCACATGTATGCAGCCTTAGTGAAGGGGTTGTGTAATGCGGAGCGGGGGGAGGAGGGGCTTCTCATGCTGCGTAGGATGAAGGAATTGGGGTGGCGGCCAAGCACCCGTGCTTATGCAGCTGTGGTTGATTTCCGGTGTAGGGAGCGTAAGGCCAAGGAGGCTGAGGAAATGCTTCAGGAGATGTTTGAAAAGGGATTGGCACCGTGTGTTGTGACATGCACTGCGGTGATAAATGCATATTGTAAGGAGGGAAGGATGAGCGATGCATTGAGGGTGTTGGAGTTGATGAAGTTGAGGGGGTGCAAGCCAAATGTGTGGACATATAATGCATTGGTCCAAGGGTTCTGTAATGAAGGAAAGGTGCACAAGGCGATGACTTTGTTGAACAAGATGAGAGCATGTGGAGTCAACCCAGATGCTGTGACATATAATTTGTTGATTCGGGGCCAATGCATTGATGGACATATAGAGAGTGCTTTCCGATTGCTACGTTTGATGGAAGGAGATGGTTTAATTGCTGATCAGTACACATATAATGCGTTGATGAATGCTCTCTGCAAGGATGGAAGAACTGATCAAGCTTGCTCCCTTTTTGATAGTCTAGAAACTAGAGGCATAAAACCTAATGCCGTGACATTCAATTCCTTGATAAATGGGTTATGCAAGTCTGGTAAAGCTGATATTGCATGGAAATTTTTGGAAAAGATGGTTTCTGCAGGTTGCACACCCGATACTTACACATACAGTTCATTTATTGAACACCTATGCAAGATGAAGGGGTCACAAGAAGGTCTGTCCTTTATAGGGGAGATGCTACAAAAGGATGTGAAGCCCTCAACAGTCAATTATACAATTGTGATTCATAAGCTTTTAAAGGAGAGAAACTATGGATTGGTTGCGAGAACCTGGGGCGAAATGGTTTCATCAGGTTGCAATCCTGATGTAGTCACTTATACAACGTCTATGCGTGCTTACTGCATTGAAGGAAGACTAAATGAAGCAGAAAATGTTTTGATGGAGATGAGCAAAAATGGGGTCACTGTAGATACAATGGCATACAATACTCTGATGGATGGACATGCAAGTATTGGACAGACAGATCATGCAGTCTCAATCTTGAAACAAATGACAAGTGTTGCTTCTGTGCCAAACCAGTTTACTTATTTTATCTTGCTTAGACATCTTGTACGCATGAGATTAGTGGAGGATGTGTTGCCTTTGACCCCAGCTGGTGTGTGGAAAGCCATAGAGCTTACTGATGTCTTTGGGTTGTTTGATGTAATGAAGAAGAACGAATTTCTTCCTAATTCAGGAACTTATTCTTCCATTCTAGAGGGGTTTTCTGAAGATGGAAGAACGGAAGAGGCGACATCGTTAGTTTCTCTTATGAAAGAAGATAGTATATCTCTGAATGAAGACATCTATACTGCTCTCGTTACTTGTTTTTGCAAATCCAAAAGGTATTTGGATGCATGGGTGTTGGTTTGCTCTATGATTCAACATGGTTTTATACCACAGTTGATGTCCTACCAACATCTGCTTTCTGGGCTTATTTGTGAAGGACAAACAGATAAGGCTAAAGAAATATTCATGAATTCTAGATGGAAAGACTATAGTCCCGATGAGATTGTGTGGAAAGTGATTATTGATGGCCTGATAAAAAAAGGTCACTCAGATATATCCCGTGAAATGATTATCATGTTAGAGCGTATGAACTGCAGACCAAGTCATCAAACCTATGCAATGCTGACTGAGGAATTACCTGACAGGGAATAATATGCCACACAAGTCTCATTCATCACTCGAAGCGAAATCCCCATCAGCTGTGCAAACTGGCATCTCATTAGGTGCTGTTCAAGCACAAGGTGCACCAAGTGATGTGAAATGGATCATCCAACATACTCTCTCACACACAAAATGAGTTCACGCTCTATTTGCTCTCTGGAAGAGCAGTGATTATCAGATTTTTGAAGACTGATATGAGCGCAAAGCATTTGAATCCAGATTGTGTGTGTGCCTGTACTATATCAGGTCGACAGATAGTGTTTACAGATTTGTAGGAGCCAAAAGTCCCATACCGCTATGGCAGGCTTCGCTACTTTATTATTTTATTGATCTGAAGAGAGGTTGCCAAGTTTGATTCGACGATTTTGTCACGGATCTTCTGAGTTACTGTGTGGCACAATTTCTGATGCTGGTTGTTGAACCGATGAGTGATCTGATTTTTTTGGGTGGCAAGTATTGTTGCCAGTAAAATATATGGAAGGGCCGAAAGATTTGGAAATGCACTCAGCGATCAGTTTCAATAAATCATCAACATAGGAATTACTGGTCACAATCTGGGAAAG AAAGGAATCTATTAACGGACGGCCAAGATTCCCTGGCCCACTCAAAACAGCGAAATGCACAAAGCCTCGATCGGCGTCTGACAGGCTGTCACGGACGTGGGCTCACAATCGGGCTTTCAGGCTGAATGTATGGCCCAGCCAGATAGGAAAGACAGCGTTATAAACCAAAGCCACGCTGCAGCCATAGCTGAGCACATGGAGGTGCCACATTTTGTCACACTAAATGTTACTCCATCCGTCTCATAATATAATATTTTAAGT ] [+] EMBL CA998772 [ TACAATACTCTGATGGATGGACATGCAAGTATTGGACAGACAGATCATGCAGTCTCAATCTTGAAACAAATGACAAGTGTTGCTTCTGTGCCAAACCAGTTTACTTATTTTATCTTGCTTAGACATCTTGTACGCATGAGATTAGTGGAGGATGT ] [+] EMBL BM420423 [ GTGATCTGATTTTTTTGGGTGGCAAGTATTGTTGCCAGTAAAATATATGGAAGGGCCGAAAGATTTGGAAATGCGCTCAGCGATCAGTTTCAATAAATCATCAACATAGGAATTACTGGTCAC ATCTGGGAAAGAAAAAAAGGAATCTATTAACGGACGGCCAAGATT CCTGGCCCACTCAAAACAGCGAAATGCAC AAGCCTCGCTCGGCGTCTGACAGGCTGTCACGGACGTGTGCTCAC ATCGGGTTTTCA GCTGAATGTATGGCCCAGCCAGATAGGAAAGACAGCGTTATAAACC AAGCCACGCTGCAGCCATAGCTGAGCACATGTAGGTGCCCCATTTTGTCACACTAAATGTTACTTACTTTGTTTCAT ATATTATAATTTGTTTTGATTTTTTTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||