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Oryza sativa
cluster # 5573 cluster # 5573       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5573#0 length = 831 sequences # 3  

consensusID : consensus_5573#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 831
fasta sequence
                              [CTCCTCGCCGCCTCAACCCCTCCCTCGCTCCGCCGCCGCCGCCGCCGACGACGACGACGCCCGGAAGGGCTTCCTCCCCATCACCGGACTAGGCGACTTCCCCGCGAGCAAGATCCGGGCTCCGCTCCGGCCAACAGTGCAGCGTAAATGGAGAGGGTGCTGAAGGATGATGCTGTTGAGGAGAAGGGCGAACGTGCCAGGATGGCAGCCTTCATTGGTGCTATGGCTATTGCAGATTTGGTCAAGACTACATTGGGACCTAAAGGAATGGACAAGATCTTGCAATCAACAGGCAGAGGGAGGAGTGTTACTGTTACAAATGATGGGGCTACAATTTTGAAGTCCCTTCATATAGACAACCCTGCTGCAAAGGTCCTTGTTGACATCTCAAAAGTTCAAGATGATGAAGTTGGTGACGGGACAACCTCTGTGGTTGTTTTGGCTGGAGAACTTTTGAGGGAGGCTGAAAAGTTAGTTAACATGAAAATTCATCCAATGACTATAATTGCAGGTTACAGAATGGCTGTTGAGTGTGCTAGAAACGCTTTGCTGGAGAGGACCATGGACAACAAAGAAAATATAGATAAGTTTAGATCAGATCTCATGAACATTGCCATGACTACACTTAGTTCAAAAATCCTCTCTCAGGACAAGGAGTACTTTGCTGAACTTGCTGTTGATGCTGTCCTAAGACTTAAGGGTAGCACAAACTTGGAAGCGATTCAAATTCTGAAGATACCTGGAGGATCCCTCAAGGACTCCTTTTTGGATGAAGGTTTCATTCTTGACAAGAAAATTGGTCTTGGACAACCANAGAGAATTGAGAATGGC]

[+] EMBL CB653321             [CTCCTCGCCGCCTCAACCCCTCCCTCGCTCCGCCGCCGCCGCCGCCGACGACGACGACGCCCGGAAGGGCTTCCTCCCCATCACCGGACTAGGCGACTTCCCCGCGAGCAAGATCCGGGCTCCGCTCCGGCCAACAGTGCAGCGTAAATGGAGAGGGTGCTGAAGGATGATGCTGTTGAGGAGAAGGGCGAACGTGCCAGGATGGCAGCCTTCATTGGTGCTATGGCTATTGCAGATTTGGTCAAGACTACATTGGGACCTAAAGGAATGGACAAGATCTTGCAATCAACAGGCAGAGGGAGGAGTGTTACTGTTACAAATGATGGGGCTACAATTTTGAAGTCCCTTCATATAGACAACCCTGCTGCAAAGGTCCTTGTTGACATCTCAAAAGTTCAAGATGATGAAGTTGGTGACGGGACAACCTCTGTGGTTGTTTTGGCTGGAGAACTTTTGAGGGAGGCTGAAAAGTTAGTTAACATGAAAATTCATCCAATGACTATAATTGCAGGTTACAGAATGGCTGTTGAGTGTGCTAGAAACGCTTTGCTGGAGAGGACCATGGACAACAAAGAAAATATAGATAAGTTTAGATCAGATCTCATGAACATTGCCATGACTACACTTAGTTCAAAAATCCTCTCTCAGGACAAGGAGTACTTTGCTGAACTTGCTGTTGATGCTGTCCTAAGACTTAAGGGTAGCACAAACTTGGAAGCGATTCAAATTCTGAAGATACCTGGAGGATCCCTGCAGGACTC                                                                      ]
[+] EMBL CB621357             [               ACCCCTCCCTCGCTCCGCCGCCGCCGCCGCCGACGACGACGACTCCCGGAAGGGCTTTCTCCCCATCACCGGACTCGGCGACTTCCCCGCGAGCAAGATCCGGGCTCCGCTCCGGCCAACAGTGCAGCGTAAATGGAGAGGGTGCTGAAGGATGATGCTGTTGAGGAGAAGGGCGAACGTGCCAGGATGGCAGCCTTCATTGGTGCTATGGCTATTGCAGATTTGGTCAAGACTACATTGGGACCTAAAGGAATGGACAAGATCTTGCAATCAACAGGCAGAGGGAGGAGTGTTACTGTTACAAATGATGGGGCTACAATTTTGAAGTCCCTTCATATAGACAACCCTGCTGCAAAGGTCCTTGTTGACATCTCAAAAGTTCAAGATGATGAAGTTGGTGACGGGACAACCTCTGTGGTTGTTTTGGCTGGAGAACTTTTGAGGGAGGCTGAAAAGTTAGTTAACATGAAAATTCATCCAATGACTATAATTGCAGGTTACAGAATGGCTGTTGAGTGTGCTAGAAACGCTTTGCTGGAGAGGACCATGGACAACAAAGAAAATATAGATAAGTTTAGATCAGATCTCATGAACATTGCCATGACTACACTTAGTTCAAAAATCCTCTCTCAGGACAAGGAGTACTTTGCTGAACTTGCTGTTGATGCTGTCCTAAGACTTAAGGGTAGCACAAACTTGGAAGCGATTCAAATTCTGAAGAAACCTGGAGGATCCCTCAAGGACTCCTTTTTGGATGAAGGTTTCATTCTTGACAAGAAAATTGGTCTTGGACAACCANAGAGAATTGAGAATGGC]
[+] EMBL CB673128             [                            TCCGCCGCCGCCGCCGCCGACGACGACGACGCCCGGAAGGGCTTCCTCCCCATCACCGGACTAGGCGACTTCCCCGCGAGCAAGATCCGGGCTCCGCTCCGGCCAACAGTGCAGCGTAAATGGAGAGGGTGCTGAAGGATGATGCTGTTGAGGAGAAGGGCGAACGTGCCAGGATGGCAGCCTTCATTGGTGCTATGGCTATTGCAGATTTGGTCAAGACTACATTGGGACCTAAAGGAATGGACAAGATCTTGCAATCAACAGGCAGAGGGAGGAGTGTTACTGTTACAAATGATGGGGCTACAATTTTGAAGTCCCTTCATATAGACAACCCTGCTGCAAAGGTCCTTGTTGACATCTCAAAAGTTCAAGATGATGAAGTTGGTGACGGGACAACCTCTGTGGTTGTTTTGGCTGGAGAACTTTTGAGGGAGGCTGAAAAGTTAGTTAACATGAAAATTCATCCAATGACTATAATTGCAGGTTACAGAATGGCTGTTGAGTGTGCTAGAAACGCTTTGCTGGAGAGGACCATGGACAACAAAGAAAATATAGATAAGTTTAGATCAGATCTCATGAACATTGCCATGACTACACTTAGTTCAAAAATCCTCTCTCAGGACAAGGAGTACTTTGCTGAACTTGCTGTTGATGCTGTCCTAAGACTTAAGGGTAGCACAAACTTGGAAGCGATTCANATTCTGAAGATACCTGGAGGATCCCTCAAGGACTCCTTTTTGGATGAAGGTTTCATTCTTGACAAGAAAATTGGTCTTGGA                        ]


>consensus_5573#0 CTCCTCGCCGCCTCAACCCCTCCCTCGCTCCGCCGCCGCCGCCGCCGACGACGACGACGC CCGGAAGGGCTTCCTCCCCATCACCGGACTAGGCGACTTCCCCGCGAGCAAGATCCGGGC TCCGCTCCGGCCAACAGTGCAGCGTAAATGGAGAGGGTGCTGAAGGATGATGCTGTTGAG GAGAAGGGCGAACGTGCCAGGATGGCAGCCTTCATTGGTGCTATGGCTATTGCAGATTTG GTCAAGACTACATTGGGACCTAAAGGAATGGACAAGATCTTGCAATCAACAGGCAGAGGG AGGAGTGTTACTGTTACAAATGATGGGGCTACAATTTTGAAGTCCCTTCATATAGACAAC CCTGCTGCAAAGGTCCTTGTTGACATCTCAAAAGTTCAAGATGATGAAGTTGGTGACGGG ACAACCTCTGTGGTTGTTTTGGCTGGAGAACTTTTGAGGGAGGCTGAAAAGTTAGTTAAC ATGAAAATTCATCCAATGACTATAATTGCAGGTTACAGAATGGCTGTTGAGTGTGCTAGA AACGCTTTGCTGGAGAGGACCATGGACAACAAAGAAAATATAGATAAGTTTAGATCAGAT CTCATGAACATTGCCATGACTACACTTAGTTCAAAAATCCTCTCTCAGGACAAGGAGTAC TTTGCTGAACTTGCTGTTGATGCTGTCCTAAGACTTAAGGGTAGCACAAACTTGGAAGCG ATTCAAATTCTGAAGATACCTGGAGGATCCCTCAAGGACTCCTTTTTGGATGAAGGTTTC ATTCTTGACAAGAAAATTGGTCTTGGACAACCANAGAGAATTGAGAATGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)