cluster # 5575

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Oryza sativa
cluster # 5575 cluster # 5575 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5575#0 length = 408 sequences # 3

consensusID : consensus_5575#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 408
fasta sequence

                              [AGCATGGCTTTGAAGCCGGGAGACAAGTGTTCTGCAACCACCAGCTGACAGGGCGTTTTCTCACGTCGCATTTGCGATTTTGCAGGCGAGAGATTTACCCCTCTGCATCCATCCACCAACCCGATCGACGACTGGTTTGCTTGCATCTGAAAAATGTCCTCTTCTAGGTGAGGTACAGTACAATTGTACAGAATAAAGCCATACAACTCACGCTTGATCTGGCCCAATTCTACCTGTCTCCTGCTGATCGATGGCGGA-CACCCACCTCTAACGGCACCGGCGCCGGCGGCGCGACTCCTCCGAGATTGGCGGGGTTCGAGCAGTTGGACGCGCGCATCAAGGAGCTGACCTCGTCGCAGGGGGAGTTGCTGGACAGGATCCAGAAGCTCAAACTGGAGGTGCAGAACT]

[+] EMBL OSS3971A             [AGCATGGCTTTGAAGCCGGGAGACAAGTGTTCTGCAACCACCAGCTGACAGGGCGTTTTCTCACGTCGCATTTGCGATTTTGCAGGCGAGAGATTTACCCCTCTGCATCCATCCACCAACCCGATCGACGACTGGTTTGCTTGCATCTGAAAAATGTCCTCTTCTAGGTGAGGTACAGTACAATTGTACAGAATAAAGCCATACAACTCACGCTTGATCTGGCCCAATTCTACCTGTCTCCTGCTGATCGATGGCGGA CACCCACCTCTAACGGCACCGGCGCCGGCGGCGCGACTCCTCCGAGATTGGCGGGGTTCGAGCAGTTGGACGCGCGCATCAAGGAGCTGACCTCGTCGCAGGGGGAGTTGCTGGACAGGATCCAGAAGCTCAAACTGGAGGTGCAGAACT]
[+] EMBL OSS3726A             [AGCATGGCTTTGAAGCCGGGAGACAAGTGTTCTGCAACCACCAGCTGACAGGGCGTTTTCTCACGTCGCATTTGCGATTTTGCAGGCGAGAGATTTACCCCTCTGCATCCATCCACCAACCCGATCGACGACTGGTTTGCTTGCATCTGAAAAATGTCCTCTTCTAGGTGAGGTACAGTACAATTGTACAGAATAAAGCCATACAACTCACGCTTGATCTGGCCCAATTCTACCTGTCTCCTGCTGATCGATGGCGGAGCACCCACC                                                                                                                                              ]
[+] EMBL OSS3078A             [AGCATGGCTTTGAAGCCGGGAGACAAGTGTTCTGCAACCACCAGCTGACAGGGCGTTTTCTCACGTCGCATTTGCGATTTTGCAGGCGAGAGATTTACCCCTCTGCATCCATCCACCAACCCGATCGACGACTGGTTTGCTTGCATCTGAAAAATGTCCTCTTCTAGGTGAGGTACAGTACAATTGTACAGAATAAAGCCATACAACTCACGCTTGATCTGGCCCAATTCTACCTGTCTCCTGCTGAT                                                                                                                                                                 ]




>consensus_5575#0
AGCATGGCTTTGAAGCCGGGAGACAAGTGTTCTGCAACCACCAGCTGACAGGGCGTTTTC
TCACGTCGCATTTGCGATTTTGCAGGCGAGAGATTTACCCCTCTGCATCCATCCACCAAC
CCGATCGACGACTGGTTTGCTTGCATCTGAAAAATGTCCTCTTCTAGGTGAGGTACAGTA
CAATTGTACAGAATAAAGCCATACAACTCACGCTTGATCTGGCCCAATTCTACCTGTCTC
CTGCTGATCGATGGCGGACACCCACCTCTAACGGCACCGGCGCCGGCGGCGCGACTCCTC
CGAGATTGGCGGGGTTCGAGCAGTTGGACGCGCGCATCAAGGAGCTGACCTCGTCGCAGG
GGGAGTTGCTGGACAGGATCCAGAAGCTCAAACTGGAGGTGCAGAACT

clustalw multiple alignements is not computed in this case