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Oryza sativa
cluster # 5591 cluster # 5591       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5591#0 length = 1631 sequences # 3  

consensusID : consensus_5591#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1631
fasta sequence
                              [GAACCTTAAGATGAGGAGGAGGAGGAGGAGAAGGAGGTGCTCGACCAAGATCACATGGCCATTGACGACGACGAAGCTGCAAAATCAACAGCTCCGCATCAAGTGGATGACCAAGATCTTGAGCCACCGACAAAAAGAGGGGTTAAGATTGTCCCAACTTCAGTGGAGGATGAGAGAGCGGCAAATCCGGAGCCAGTCAAGCCTCCAGTAAAGAAGCTTGCCGCAACAATTGATCTCCGGGCGGTGAACCCAGAGCCAGTGACCATTCCACCAGTGGAGAAGAAGGCTATGCCAGTGATAATTCACCGGATGACGAACGCAGAGCCAGCTAAACCTTCTCCAGAGAAAAAAGCGTCGCCACTGAACGGCCGCCGGATTCCCAAGCAAGATCCAATCAGTGCTCCTCCTGTCGAAGAAGAGTACGAGGAGATTCAGGGCAGGCCATCAGTACCCAGCAGAAGCAATGGAAGAATGCAGAATATTGGTCAGTTATTTTTCCTTTTGTAGGAAAGATGCTTCTAGTTAATGAAATTGGAATTGATGGTTTTCTTTCTTCTTCTTGTTTCGCGTTGTTTTTTTAGTGGATTTGGTCATGTGGAGAGATGTCTCCAAGTCTACACTTGTCTTTGGATTAGGGATTTTTTTACTGATCTCCTCCTCCTATGCCAAAGACCTAAACTATAACACAATCACAGCAGCTTCATATCTTGGCCTAGTCTACCTTGGTCTAAGGTTCCTTAGCAAGTCCATACTTAACAGGGGAGAGAATGTGGACTGTGATGATGCTGAGAGGAGTGGTGAAAGGTACCTGGTGGGGGAGGAGGAGGCCATCTGGCTGCTCAGGCTTGTTCTGCCTTACATCAATGAGGTGCTCCTGAATCTAAGGTCCCTCTTCTCTGGTGAGCCTGCAACAACCATGAAGCTGGCACTCCTGCTGTTTGCAATGGCCCGGTGTGGCAACTTTGTCACCCTCTGGACACTGGCAAAACTGGTGTTCTTTGGGGTCTTCATCATTCCGAAGGTGTGCTCATCTTACTCCACCCAGCTTGCAAGATATGGGAGGTTTTGGCTGGAGAGGTTCAGGGATGGATGGGAGTCCTGCTCCCACAAGAAGGCGGTCGTGGCAGCCGTCTTCACCCTTGTCTGGAACGTCTCATCCACGGTTGCTCGTGTCTGGGCTGTGTTCATGCTGGTGGTGGCCATGAAGTGCTACCAGCAGCGGATGATGGAGTACGGCTGGAGCAGCACGGTGGAGGACTCACAGGAGGCCACCGCCGCCGCCACCGGCGACGATGAGTCACCGCAGGAAGAAACTCCTGCTAGATCAAGCCCGGCCAAGGCGCACGACCACGAGCCGGCACAGGGATTTGGGGCGGCGGCGCCGGCGCGGCATCGCCGGACGCCAGTCTCCGGCGAGTTTGCAAGGGAGAGGCTGAGAGTGAGGGGTGGCATCCAGCCTAGGTGACAGGACAAATCTGTGGATGCCGTATGTTTTTTTTTTCTTTCATTTTTTTTACATTGTGGTAGTTTTGGGTTGTGAGGACGTAATGTCACGAAATGGTTCACGGAAATAATGAGTATGATCCACACATAGGAGTTCCATATAATAGAATGGCTATAGAAATTAATAT]

[+] EMBL CB622271             [GAACCTTAAGATGAGGAGGAGGAGGAGGAGAAGGAGGTGCTCGACCAAGATCACATGGCCATTGACGACGACGAAGCTGCAAAATCAACAGCTCCGCATCAAGTGGATGACCAAGATCTTGAGCCACCGACAAAAAGAGGGGTTAAGATTGTCCCAACTTCAGTGGAGGATGAGAGAGCGGCAAATCCGGAGCCAGTCAAGCCTCCAGTAAAGAAGCTTGCCGCAACAATTGATCTCCGGGCGGTGAACCCAGAGCCAGTGACCATTCCACCAGTGGAGAAGAAGGCTATGCCAGTGATAATTCACCGGATGACGAACGCAGAGCCAGCTAAACCTTCTCCAGAGAAAAAAGCGTCGCCACTGAACGGCCGCCGGATTCCCAAGCAAGATCCAATCAGTGCTCCTCCTGTCGAAGAAGAGTACGAGGAGATTCAGGGCAGGCCATCAGTACCCAGCAGAAGCAATGGAAGAATGCAGAATATTGGTCAGTTATTTTTCCTTTTGTAGGAAAGATGCTTCTAGTTAATGAAATTGGAATTGATGGTTTTCTTTCTTCTTCTTGTTTCGCGTTGTTTTTTTAGTGGATTTGGTCATGTGGAGAGATGTCTCCAAGTCTACACTTGTCTTTGGATTAGGGATTTTTTTACTGATCTCCTCCTCCTATGCCAAAGACCTAAACTATAACACAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK060042             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATTAGGGACTTTTTTACTGATCTCCTCCTCCTATGCCAAAGACCTAAACTATAACACAATCACAGCAGCTTCATATCTTGGCCTAGTCTACCTTGGTCTAAGGTTCCTTAGCAAGTCCATACTTAACAGGGGAGAGAATGTGGACTGTGATGATGCTGAGAGGAGTGGTGAAAGGTACCTGGTGGGGGAGGAGGAGGCCATCTGGCTGCTCAGGCTTGTTCTGCCTTACATCAATGAGGTGCTCCTGAATCTAAGGTCCCTCTTCTCTGGTGAGCCTGCAACAACCATGAAGCTGGCACTCCTGCTGTTTGCAATGGCCCGGTGTGGCAACTTTGTCACCCTCTGGACACTGGCAAAACTGGTGTTCTTTGGGGTCTTCATCATTCCGAAGGTGTGCTCATCTTACTCCACCCAGCTTGCAAGATATGGGAGGTTTTGGCTGGAGAGGTTCAGGGATGGATGGGAGTCCTGCTCCCACAAGAAGGCGGTCGTGGCAGCCGTCTTCACCCTTGTCTGGAACGTCTCATCCACGGTTGCTCGTGTCTGGGCTGTGTTCATGCTGGTGGTGGCCATGAAGTGCTACCAGCAGCGGATGATGGAGTACGGCTGGAGCAGCACGGTGGAGGACTCACAGGAGGCCACCGCCGCCGCCACCGGCGACGATGAGTCACCGCAGGAAGAAACTCCTGCTAGATCAAGCCCGGCCAAGGCGCACGACCACGAGCCGGCACAGGGATTTGGGGCGGCGGCGCCGGCGCGGCATCGCCGGACGCCAGTCTCCGGCGAGTTTGCAAGGGAGAGGCTGAGAGTGAGGGGTGGCATCCAGCCTAGGTGACAGGACAAATCTGTGGATGCCGTATGTTTTTTTTTTCTTTCATTTTTTTTACATTGTGGTAGTTTTGGGTTGTGAGGACGTAATGTCACGAAATGGTTCACGGAAATAATGAGTATGATCCACACATAGGAGTTCCATATAATAGAATGGCTATAGAAATTAATAT]
[+] EMBL CF290840             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGCACTCCTGCTGTTTGCAATGGCCCGGTGTGGCAACTTTGTCACCCTCTGGACACTGGCAAAACTGGTGTTCTTTGGGGTCTTCATCATTCCGAAGGTGTGCTCATCTTACTCCACCCAGCTTGCAAGATATGGGAGGTTTTGGCTGGAGAGGTTCAGGGATGGATGGGAGTCCTGCTCCCACAAGAAGGCGGTCGTGGCAGCCGTCTTCACCCTTGTCTGGAACGTCTCATCCACGGTTGCTCGTGTCTGGGCTGTGTTCATGCTGGTGGTGGCCATGAAGTGCTACCAGCAGCGGATGATGGAGTACGGCTGGAGCAGCACGGTGGAGGACTCACAGGAGGCCACCGCCGCCGCCACCGGCGACGATGAGTCACCGCAGGAAGAAACTCCTGCTAGATCAAGCCCGGCCAAGGCGCACGACCACGAGCCGGCACAGGGATTTGGGGCGGCGGCGCCGGCGCGGCATCGCCGGACGCCAGTCTCCGGCGAGTTTGCAAG                                                                                                                                                                                                              ]


>consensus_5591#0 GAACCTTAAGATGAGGAGGAGGAGGAGGAGAAGGAGGTGCTCGACCAAGATCACATGGCC ATTGACGACGACGAAGCTGCAAAATCAACAGCTCCGCATCAAGTGGATGACCAAGATCTT GAGCCACCGACAAAAAGAGGGGTTAAGATTGTCCCAACTTCAGTGGAGGATGAGAGAGCG GCAAATCCGGAGCCAGTCAAGCCTCCAGTAAAGAAGCTTGCCGCAACAATTGATCTCCGG GCGGTGAACCCAGAGCCAGTGACCATTCCACCAGTGGAGAAGAAGGCTATGCCAGTGATA ATTCACCGGATGACGAACGCAGAGCCAGCTAAACCTTCTCCAGAGAAAAAAGCGTCGCCA CTGAACGGCCGCCGGATTCCCAAGCAAGATCCAATCAGTGCTCCTCCTGTCGAAGAAGAG TACGAGGAGATTCAGGGCAGGCCATCAGTACCCAGCAGAAGCAATGGAAGAATGCAGAAT ATTGGTCAGTTATTTTTCCTTTTGTAGGAAAGATGCTTCTAGTTAATGAAATTGGAATTG ATGGTTTTCTTTCTTCTTCTTGTTTCGCGTTGTTTTTTTAGTGGATTTGGTCATGTGGAG AGATGTCTCCAAGTCTACACTTGTCTTTGGATTAGGGATTTTTTTACTGATCTCCTCCTC CTATGCCAAAGACCTAAACTATAACACAATCACAGCAGCTTCATATCTTGGCCTAGTCTA CCTTGGTCTAAGGTTCCTTAGCAAGTCCATACTTAACAGGGGAGAGAATGTGGACTGTGA TGATGCTGAGAGGAGTGGTGAAAGGTACCTGGTGGGGGAGGAGGAGGCCATCTGGCTGCT CAGGCTTGTTCTGCCTTACATCAATGAGGTGCTCCTGAATCTAAGGTCCCTCTTCTCTGG TGAGCCTGCAACAACCATGAAGCTGGCACTCCTGCTGTTTGCAATGGCCCGGTGTGGCAA CTTTGTCACCCTCTGGACACTGGCAAAACTGGTGTTCTTTGGGGTCTTCATCATTCCGAA GGTGTGCTCATCTTACTCCACCCAGCTTGCAAGATATGGGAGGTTTTGGCTGGAGAGGTT CAGGGATGGATGGGAGTCCTGCTCCCACAAGAAGGCGGTCGTGGCAGCCGTCTTCACCCT TGTCTGGAACGTCTCATCCACGGTTGCTCGTGTCTGGGCTGTGTTCATGCTGGTGGTGGC CATGAAGTGCTACCAGCAGCGGATGATGGAGTACGGCTGGAGCAGCACGGTGGAGGACTC ACAGGAGGCCACCGCCGCCGCCACCGGCGACGATGAGTCACCGCAGGAAGAAACTCCTGC TAGATCAAGCCCGGCCAAGGCGCACGACCACGAGCCGGCACAGGGATTTGGGGCGGCGGC GCCGGCGCGGCATCGCCGGACGCCAGTCTCCGGCGAGTTTGCAAGGGAGAGGCTGAGAGT GAGGGGTGGCATCCAGCCTAGGTGACAGGACAAATCTGTGGATGCCGTATGTTTTTTTTT TCTTTCATTTTTTTTACATTGTGGTAGTTTTGGGTTGTGAGGACGTAATGTCACGAAATG GTTCACGGAAATAATGAGTATGATCCACACATAGGAGTTCCATATAATAGAATGGCTATA GAAATTAATAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)