cluster # 5597

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Oryza sativa
cluster # 5597 cluster # 5597 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5597#0 length = 641 sequences # 3

consensusID : consensus_5597#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 641
fasta sequence

                              [AAGAAGGCGCTGCAAAGAGTTGGAAGGCATTGTTTCCAGATTGAAGGGCGAGGATCTAAGAGGCTTAGATGTCAAAGTCCTGGAAGAGTTACAAAATTTTCATGTAGAAGCGTTGTCAAAGATTTGCCAAGAAAAGATGGCAAATCAGGTGCTATAGCAGGGCGAGGTCACAGCTTTGCAGTTGCCCTCCAATTCATCAGCTGACGTTGATCCATTCACACCACACCACACAATACTCCAGCAGCCGAAGCAGCACTGACGATTCTAGTACAACGGAGTTTAAGCAATCTCATGGAAGTGGAATGTGGTTATGCCTTCTGACTGTCAGCCCTGGTGCTAATCCGCAGTATGCTGCCCCCTTCTTGTACAGCTTCATTTGACTTAGGAAGATCGTAGCACGGTTACTGTATTTACTTAGGGACTTAGGTACGATTGACGCCCAAGGCGTGTAGCCAAGCCGTACATCTCCTTGTGGAGACAGCCGAACGGACTGTACCGTGGTTTTTTTTCGCGTACACTCGTAGTTGTAGCCTGTAGCAAAGCTGCAGTTTAGTACTAGTACTAGTAGTCGTCTTGGTGTTTATTTGATGTTTAAATAGCGTATGCATATATATACCTGACGCTGTACTTTATTGAAAAAA]

[+] EMBL BP184354             [AAGAAGGCGCTGCAAAGAGTTGGAAGGCATTGTTTCCAGATTGAAGGGCGAGGATCTAAGAGGCTTAGATGTCAAAGTCCTGGAAGAGTTACAAAATTTTCATGTAGAAGCGTTGTCAAAGATTTGCCAAGAAAAGATGGCAAATCAGGTGCTATAGCAGGGCGAGGTCACAGCTTTGCAGTTGCCCTCCAATTCATCAGCTGACGTTGATCCATTCACACCACACCACACAATACTCCAGCAGCCGAAGCAGCACTGACGATTCTAGTACAACGGAGTTTAAGCAATCTCATGGAAGTGGAATGTGGTTATGCCTTCTGACTGTCAGCCCTGGTGCTAATCCGCAGTATGCTGCCCCCTTCTTGTACAGCTTCATTTGACTTAGGAAGATCGTAGCACGGTTACTGTATTTACTTAGGGACTTAGGTACGATTGACGCCCAAGGCGTGTAGCCAAGCCGTACATCTCCTTGTGGAGACAGCCGAACGGACTGTACCGTGGTTTTTTTTCGCGTACACTCGTAGTTGTAGCCTGTAGCAAAGCTGCAGTTTAGTACTAGTACTAGTAGTCGTCTTGGTGTTTATTTGATGTTTAAATAGCGTATGCATATATATACCTGACGCTGTACTTTATTGAAAAAA]
[+] EMBL AK062857             [                                                                                                                                                                                 GCAGTTGCCCTCCAATTCATCAGCTGACGTTGATCCATTCACACCACACCACACAATACTCCAGCAGCCGAAGCAGCACTGACGATTCTAGTACAACGGAGTTTAAGCAATCTCATGGAAGTGGAATGTGGTTATGCCTTCTGACTGTCAGCCCTGGTGCTAATCCGCAGTATGCTGCCCCCTTCTTGTACAGCTTCATTTGACTTAGGAAGATCGTAGCACGGTTACTGTATTTACTTAGGGACTTAGGTACGATTGACGCCCAAGGCGTGTAGCCAAGCCGTACATCTCCTTGTGGAGACAGCCGAACGGACTGTACCGTGGTTTTTTTTCGCGTACACTCGTAGTTGTAGCCTGTAGCAAAGCTGCAGTTTAGTACTAGTACTAGTAGTCGTCTTGGTGTTTATTTGATGTTTAAATAGCGT                                       ]
[-] EMBL D43078               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATCTCCTTGTGGAGACAGCCGAACGGATTGTGCCGTGGTTTTTTTTCGCGTACACTCGTAGTTGTAGCCTGTGACAAAGTTGCAGTTTAGTACTAGTACTAGTAGTTGTCTTAATGTTTATTTGGTGTTTAAATAGCGTA                                      ]




>consensus_5597#0
AAGAAGGCGCTGCAAAGAGTTGGAAGGCATTGTTTCCAGATTGAAGGGCGAGGATCTAAG
AGGCTTAGATGTCAAAGTCCTGGAAGAGTTACAAAATTTTCATGTAGAAGCGTTGTCAAA
GATTTGCCAAGAAAAGATGGCAAATCAGGTGCTATAGCAGGGCGAGGTCACAGCTTTGCA
GTTGCCCTCCAATTCATCAGCTGACGTTGATCCATTCACACCACACCACACAATACTCCA
GCAGCCGAAGCAGCACTGACGATTCTAGTACAACGGAGTTTAAGCAATCTCATGGAAGTG
GAATGTGGTTATGCCTTCTGACTGTCAGCCCTGGTGCTAATCCGCAGTATGCTGCCCCCT
TCTTGTACAGCTTCATTTGACTTAGGAAGATCGTAGCACGGTTACTGTATTTACTTAGGG
ACTTAGGTACGATTGACGCCCAAGGCGTGTAGCCAAGCCGTACATCTCCTTGTGGAGACA
GCCGAACGGACTGTACCGTGGTTTTTTTTCGCGTACACTCGTAGTTGTAGCCTGTAGCAA
AGCTGCAGTTTAGTACTAGTACTAGTAGTCGTCTTGGTGTTTATTTGATGTTTAAATAGC
GTATGCATATATATACCTGACGCTGTACTTTATTGAAAAAA

clustalw multiple alignements is not computed in this case