cluster # 5631

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Oryza sativa
cluster # 5631 cluster # 5631 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5631#0 length = 2872 sequences # 3
consensusID : consensus_5631#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2872
fasta sequence
                              [GGAGGTGTAAAGAGAGAACGAACCATCAGGAAGAAGACTTGGGGACTTGGTTCGAAGTCCACGCCCGCCCATCCTCGCCGTCGCTGCCGCCGCCGGCGAGCCGCCGGAATCCAGATCCAGAGAGAGAGAGCCGCCGCATCCGGTCGACATGGAGATCGCGGTGGGCGCCCTGTCCGGCATGGTGGACGCTCTGCCGGCCAAGCTCGGCGACCTGCTGCAGCAGGAGTACACGCTGCTGTCCGGCGCCCGCGGGGACGTCGGCTTCCTCCAGTCCGAGCTCGGCACCATGAACGCCGCCCTCCTCCGGTGCGAGTCCCTCGAGAGCTCCGACGTCCAGACCCGGGCCTGGGTCGCCCAGGTCCGCGACCTCGCCTACGACATCGAGGACTGGATCGACCTCTTCGCCCACCGCGTCGACGGCGGCGCCGCCGCCTCTCCGGGCGCTGCGGCCGCCACCTCCTCCTCCTCCTCCTCCGGCGGGTTCCTCTCCTGGGTGCGCTGCTGCGTCAACAAGGTCACGACGCTCCCCGCCCGCCACGTCATCGCTACCGAGCTGCAGGAGCTCAAGAACCGGGTCATCGAGCTGAGCGAGCAGCGGAAGCGCTACAGGTTCGATCCGCCGGCGCGTCACGCCGGCGGCCGGAGCGGCGTGGCGGCCGTTGACCCCAGGCTGGTTGCGCTCTATGCTGACACTAGTTCCCTCGTCGGCCTGGATGCGCCGGTGAAGAAGGTGTCCGAGATGGTGGTGGACGACGGCACGACTGGGCTCAAGGTGGTTTCCATCTCCGGGATGCCGGGCGCCGGGAAGACGACGCTTGCCACGGCGGTGCTCCGGCGACTCAAGGAGGAGAACAAGTTCCATTGCAGCGCTTTCGTCTCCGTCGGTCAGAAGCCGGACATTGTAGGTAAGACACTGAAGGGCATCCTCTCCCAGATCGGCAATGGGTATGCAGGAGGCGAAGATATTGGCCGATTGATCGGAATGCTGAGAGATGAATTGAAGGATAAGAGGTACCTCATTGTCATTGATGATTTATGGGGTAGAACAGAATGGTCAACACTCAAGTGTTGTTTCCGAGATGATAATCTTGGCAGTAGGATAATGGTCACAACCAGAAATGATGAGTTGGCAAAGGAATGTTCTTCCAATTCGGATGAATCAGTTTACAAAACTGGTCTCCTTAGTGACGCGGACTCCAAAGATTTATTTTCCAACAAAGCTTTTGGGAAAGGGAAGGATTGTCCTAACCATTTGAAGGATCTCTATGATATAATCGTGGAAAGATGTGGGGGCTTGCCGCTTGCTATATCTAGCGTAGCTGGCGCACTAGCACATC-GTTTTTCAAAAGATGAATGGGAGAGGTATGAATCTAACTTGCTACCTAGTTCACATTCCGATGAGCTGAACTTGAAGCAAATACTTAATCTGAGTTACAACGATCTACCTTCACATCTCAAGTCATGTATGTTGTATCTAAGCATATTCCCAAATAAATATGAAATTGATGTGGAGCGCTTGGTGAGGCGATGGATTGCTGAAGGATTCATCGCTGATGCACGCCATGCAAGCAAAGAGGAGACAGCAAGAAGTTACCTTACTGATCTCATTAGCAGAAACCTGATCCAGGCATTGCATCTGAGACATAATGGCACCCCAAGCTGCTACACACTTCACCCAGTAATACATGATTTCATTGTGGTCAAGTCCATGGAAGAGAACTTTGTCACTGTTCTAGATGCTAAGAAAGAAGCTCTCTCCACCAACAATGGCACAGTCCGGCGACTCTCTCTTCAAAACAGTGTCAAACAGGATCTTGCTGGTGCACGAAATGATATGATCAAGCATGCTCGCTCAGTGACTGTCTTTGGTCATGCCAATGGGGTGCCTCGCCTGAATGATATGAGCGTATTACGTGTTCTGGATCTGGAAGGCTGCAATGGTCCATTATGCCTCGATGGCCTCTGCAAATTGATTCTTTTGAGGTACCTGAACCTCAGGGGAACTGATGTCAGCGAGCTCCCAGCACAAATTGGGGAGCTTAGGTGCCTGGAGACACTTGATGTGAGATCTACGAAGGTGAAAGAGCTACCTGCCAGCATTGTCAGCTTGGAAAAGCTAATGCATTTGCTTGCTGGAAATGCTAAGTTGCCTGGCGAGATCAGTAAGATGAACGGCCTACTAACGTTGTCATGCGCCAACGTCTGGAAGAACACAGGGAGTGTCTTGCCAGAACTTGCTGATCTTGCAAACTTGAGGGAATTGGAACTGTTTTGTGATGCTTCTGAAATCTCTGGTGATAATAAGACACGAGTCTCTTTTTCTAGCGACGGATTCAAAAGGCTTAAGCAGCTGAGCATCCAGGGCAGCTTGCCATCAGTGGCCTTTGTTAACAGTTCCTTGCGAAAGGTTGAAGTTCTTGAGCTGAAGTACGAAAAAGGCATTTCAGATGGGTCAAATGGTGTGTCTGGTATAGAGCATTTGCCTAGCCTGAAGCATGTATTGATTGAGTTCTCGCAGAAGGATGCTGGCGCCACTGCGACAATCGCTTCTGTGAGGAACGCCGCTGAGATGGTTCACCCTAATCATCCAGATGTCTCTGTCAAAGTTGATGGAAAGGCCATCTGATACGGTCTGGAGTTTGTTTCAGAGCAAGAGGGATATAGTACACACTTGCACGGTACTTTCTGCCGGATTTCTTTGTTGTGTTGAATTGAGTTTTGAGTTAATGCCATTCTTTGTCACTCTGCTTATATATGTATGACCATGTCGTCGTTTTCTCAAAAGTACTTTGTTGCAGCAGCAACAGCATCAACTGCTTGCCCTATAGGGATGTTTTGTTGAAGAAGTTATATACTGATGTTTTTACAGTGA]

[+] EMBL AK068195             [GGAGGTGTAAAGAGAGAACGAACCATCAGGAAGAAGACTTGGGGACTTGGTTCGAAGTCCACGCCCGCCCATCCTCGCCGTCGCTGCCGCCGCCGGCGAGCCGCCGGAATCCAGATCCAGAGAGAGAGAGCCGCCGCATCCGGTCGACATGGAGATCGCGGTGGGCGCCCTGTCCGGCATGGTGGACGCTCTGCCGGCCAAGCTCGGCGACCTGCTGCAGCAGGAGTACACGCTGCTGTCCGGCGCCCGCGGGGACGTCGGCTTCCTCCAGTCCGAGCTCGGCACCATGAACGCCGCCCTCCTCCGGTGCGAGTCCCTCGAGAGCTCCGACGTCCAGACCCGGGCCTGGGTCGCCCAGGTCCGCGACCTCGCCTACGACATCGAGGACTGGATCGACCTCTTCGCCCACCGCGTCGACGGCGGCGCCGCCGCCTCTCCGGGCGCTGCGGCCGCCACCTCCTCCTCCTCCTCCTCCGGCGGGTTCCTCTCCTGGGTGCGCTGCTGCGTCAACAAGGTCACGACGCTCCCCGCCCGCCACGTCATCGCTACCGAGCTGCAGGAGCTCAAGAACCGGGTCATCGAGCTGAGCGAGCAGCGGAAGCGCTACAGGTTCGATCCGCCGGCGCGTCACGCCGGCGGCCGGAGCGGCGTGGCGGCCGTTGACCCCAGGCTGGTTGCGCTCTATGCTGACACTAGTTCCCTCGTCGGCCTGGATGCGCCGGTGAAGAAGGTGTCCGAGATGGTGGTGGACGACGGCACGACTGGGCTCAAGGTGGTTTCCATCTCCGGGATGCCGGGCGCCGGGAAGACGACGCTTGCCACGGCGGTGCTCCGGCGACTCAAGGAGGAGAACAAGTTCCATTGCAGCGCTTTCGTCTCCGTCGGTCAGAAGCCGGACATTGTAGGTAAGACACTGAAGGGCATCCTCTCCCAGATCGGCAATGGGTATGCAGGAGGCGAAGATATTGGCCGATTGATCGGAATGCTGAGAGATGAATTGAAGGATAAGAGGTACCTCATTGTCATTGATGATTTATGGGGTAGAACAGAATGGTCAACACTCAAGTGTTGTTTCCGAGATGATAATCTTGGCAGTAGGATAATGGTCACAACCAGAAATGATGAGTTGGCAAAGGAATGTTCTTCCAATTCGGATGAATCAGTTTACAAAACTGGTCTCCTTAGTGACGCGGACTCCAAAGATTTATTTTCCAACAAAGCTTTTGGGAAAGGGAAGGATTGTCCTAACCATTTGAAGGATCTCTATGATATAATCGTGGAAAGATGTGGGGGCTTGCCGCTTGCTATATCTAGCGTAGCTGGCGCACTAGCACATC GTTTTTCAAAAGATGAATGGGAGAGGTATGAATCTAACTTGCTACCTAGTTCACATTCCGATGAGCTGAACTTGAAGCAAATACTTAATCTGAGTTACAACGATCTACCTTCACATCTCAAGTCATGTATGTTGTATCTAAGCATATTCCCAAATAAATATGAAATTGATGTGGAGCGCTTGGTGAGGCGATGGATTGCTGAAGGATTCATCGCTGATGCACGCCATGCAAGCAAAGAGGAGACAGCAAGAAGTTACCTTACTGATCTCATTAGCAGAAACCTGATCCAGGCATTGCATCTGAGACATAATGGCACCCCAAGCTGCTACACACTTCACCCAGTAATACATGATTTCATTGTGGTCAAGTCCATGGAAGAGAACTTTGTCACTGTTCTAGATGCTAAGAAAGAAGCTCTCTCCACCAACAATGGCACAGTCCGGCGACTCTCTCTTCAAAACAGTGTCAAACAGGATCTTGCTGGTGCACGAAATGATATGATCAAGCATGCTCGCTCAGTGACTGTCTTTGGTCATGCCAATGGGGTGCCTCGCCTGAATGATATGAGCGTATTACGTGTTCTGGATCTGGAAGGCTGCAATGGTCCATTATGCCTCGATGGCCTCTGCAAATTGATTCTTTTGAGGTACCTGAACCTCAGGGGAACTGATGTCAGCGAGCTCCCAGCACAAATTGGGGAGCTTAGGTGCCTGGAGACACTTGATGTGAGATCTACGAAGGTGAAAGAGCTACCTGCCAGCATTGTCAGCTTGGAAAAGCTAATGCATTTGCTTGCTGGAAATGCTAAGTTGCCTGGCGAGATCAGTAAGATGAACGGCCTACTAACGTTGTCATGCGCCAACGTCTGGAAGAACACAGGGAGTGTCTTGCCAGAACTTGCTGATCTTGCAAACTTGAGGGAATTGGAACTGTTTTGTGATGCTTCTGAAATCTCTGGTGATAATAAGACACGAGTCTCTTTTTCTAGCGACGGATTCAAAAGGCTTAAGCAGCTGAGCATCCAGGGCAGCTTGCCATCAGTGGCCTTTGTTAACAGTTCCTTGCGAAAGGTTGAAGTTCTTGAGCTGAAGTACGAAAAAGGCATTTCAGATGGGTCAAATGGTGTGTCTGGTATAGAGCATTTGCCTAGCCTGAAGCATGTATTGATTGAGTTCTCGCAGAAGGATGCTGGCGCCACTGCGACAATCGCTTCTGTGAGGAACGCCGCTGAGATGGTTCACCCTAATCATCCAGATGTCTCTGTCAAAGTTGATGGAAAGGCCATCTGATACGGTCTGGAGTTTGTTTCAGAGCAAGAGGGATATAGTACACACTTGCACGGTACTTTCTGCCGGATTTCTTTGTTGTGTTGAATTGAGTTTTGAGTTAATGCCATTCTTTGTCA                                                                                                                                  ]
[+] EMBL CB651528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGCTATATCTAGCGTAGCTGGCGCACTAGCACATCAGTTTTTCAAAAGATGAATGGGAGAGGTATGAATCTAACTTGCTACCTAGTTCACATTCCGATGAGCTGAACTTGAAGCAAATACTTAATCTGAGTTACAACGATCTACCTTCACATCTCAAGTCATGTATGTTGTATCTAAGCATATTCCCAAATAAATATGAAATTGATGTGGAGCGCTTGGTGAGGCGATGGATTGCTGAAGGATTCATCGCTGATGCACGCCATGCAAGCAAAGAGGAGACAGCAAGAAGTTACCTTACTGATCTCATTAGCAGAAACCTGATCCAGGCATTGCATCTGAGACATAATGGCACCCCAAGCTGCTACACACTTCACCCAGTAATACATGATTTCATTGTGGTCAAGTCCATGGAAGAGAACTTTGTCACTGTTCTAGATGCTAAGAAAGAAGCTCTCTCCACCAACAATGGCACAGTCCGGCGACTCTCTCTTCAAAACAGTGTCAAACAGGATCTTGCTGGTGCACGAAATGATATGATCAAGCATGCTCGCTCAGTGACTGTCTTTGGTCATGCCAATGGGGTGCCTCGCCTGAATGATATGAGCGTATTACGTGTTCTGGATCTGGAAGGCTGCAATGGTCCATTATGCCTCGATGGCCTCTGCAAATTGATTCTTTTGAGGTACCTGAACCTCAGGGGAACTGATGTCAGCGAGCTCCCAGCACAAATTGGGGAGCTTANGTGCCTGGAGACACTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB651529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGCTAATGCATTTGCTTGCTGGAAATGCTAAGTTGCCTGGCGAGATCAGTAAGATGAACGGCCTACTAACGTTGTCATGCGCCAACGTCTGGAAGAACACAGGGAGTGTCTTGCCAGAACTTGCTGATCTTGCAAACTTGAGGGAATTGGAACTGTTTTGTGATGCTTCTGAAATCTCTGGTGATAATAAGACACGAGTCTCTTTTTCTAGCGACGGATTCAAAAGGCTTAAGCAGCTGAGCATCCAGGGCAGCTTGCCATCAGTGGCCTTTGTTAACAGTTCCTTGCGAAAGGTTGAAGTTCTTGAGCTGAAGTACGAAAAAGGCATTTCAGATGGGTCAAATGGTGTGTCTGGTATAGAGCATTTGCCTAGCCTGAAGCATGTATTGATTGAGTTCTCGCAGAAGGATGCTGGCGCCACTGCGACAATCGCTTCTGTGAGGAACGCCGCTGAGATGGTTCACCCTAATCATCCAGATGTCTCTGTCAAAGTTGATGGAAAGGCCATCTGATACGGTCTGGAGTTTGTTTCAGAGCAAGAGGGATATAGTACACACTTGCACGGTACTTTCTGCCGGATTTCTTTGTTGTGTTGAATTGAGTTTTGAGTTAATGCCATTCTTTGTCACTCTGCTTATATATGTATGACCATGTCGTCGTTTTCTCAAAAGTACTTTGTTGCAGCAGCAACAGCATCAACTGCTTGCCCTATAGGGATGTTTTGTTGAAGAAGTTATATACTGATGTTTTTACAGTGA]




>consensus_5631#0
GGAGGTGTAAAGAGAGAACGAACCATCAGGAAGAAGACTTGGGGACTTGGTTCGAAGTCC
ACGCCCGCCCATCCTCGCCGTCGCTGCCGCCGCCGGCGAGCCGCCGGAATCCAGATCCAG
AGAGAGAGAGCCGCCGCATCCGGTCGACATGGAGATCGCGGTGGGCGCCCTGTCCGGCAT
GGTGGACGCTCTGCCGGCCAAGCTCGGCGACCTGCTGCAGCAGGAGTACACGCTGCTGTC
CGGCGCCCGCGGGGACGTCGGCTTCCTCCAGTCCGAGCTCGGCACCATGAACGCCGCCCT
CCTCCGGTGCGAGTCCCTCGAGAGCTCCGACGTCCAGACCCGGGCCTGGGTCGCCCAGGT
CCGCGACCTCGCCTACGACATCGAGGACTGGATCGACCTCTTCGCCCACCGCGTCGACGG
CGGCGCCGCCGCCTCTCCGGGCGCTGCGGCCGCCACCTCCTCCTCCTCCTCCTCCGGCGG
GTTCCTCTCCTGGGTGCGCTGCTGCGTCAACAAGGTCACGACGCTCCCCGCCCGCCACGT
CATCGCTACCGAGCTGCAGGAGCTCAAGAACCGGGTCATCGAGCTGAGCGAGCAGCGGAA
GCGCTACAGGTTCGATCCGCCGGCGCGTCACGCCGGCGGCCGGAGCGGCGTGGCGGCCGT
TGACCCCAGGCTGGTTGCGCTCTATGCTGACACTAGTTCCCTCGTCGGCCTGGATGCGCC
GGTGAAGAAGGTGTCCGAGATGGTGGTGGACGACGGCACGACTGGGCTCAAGGTGGTTTC
CATCTCCGGGATGCCGGGCGCCGGGAAGACGACGCTTGCCACGGCGGTGCTCCGGCGACT
CAAGGAGGAGAACAAGTTCCATTGCAGCGCTTTCGTCTCCGTCGGTCAGAAGCCGGACAT
TGTAGGTAAGACACTGAAGGGCATCCTCTCCCAGATCGGCAATGGGTATGCAGGAGGCGA
AGATATTGGCCGATTGATCGGAATGCTGAGAGATGAATTGAAGGATAAGAGGTACCTCAT
TGTCATTGATGATTTATGGGGTAGAACAGAATGGTCAACACTCAAGTGTTGTTTCCGAGA
TGATAATCTTGGCAGTAGGATAATGGTCACAACCAGAAATGATGAGTTGGCAAAGGAATG
TTCTTCCAATTCGGATGAATCAGTTTACAAAACTGGTCTCCTTAGTGACGCGGACTCCAA
AGATTTATTTTCCAACAAAGCTTTTGGGAAAGGGAAGGATTGTCCTAACCATTTGAAGGA
TCTCTATGATATAATCGTGGAAAGATGTGGGGGCTTGCCGCTTGCTATATCTAGCGTAGC
TGGCGCACTAGCACATCGTTTTTCAAAAGATGAATGGGAGAGGTATGAATCTAACTTGCT
ACCTAGTTCACATTCCGATGAGCTGAACTTGAAGCAAATACTTAATCTGAGTTACAACGA
TCTACCTTCACATCTCAAGTCATGTATGTTGTATCTAAGCATATTCCCAAATAAATATGA
AATTGATGTGGAGCGCTTGGTGAGGCGATGGATTGCTGAAGGATTCATCGCTGATGCACG
CCATGCAAGCAAAGAGGAGACAGCAAGAAGTTACCTTACTGATCTCATTAGCAGAAACCT
GATCCAGGCATTGCATCTGAGACATAATGGCACCCCAAGCTGCTACACACTTCACCCAGT
AATACATGATTTCATTGTGGTCAAGTCCATGGAAGAGAACTTTGTCACTGTTCTAGATGC
TAAGAAAGAAGCTCTCTCCACCAACAATGGCACAGTCCGGCGACTCTCTCTTCAAAACAG
TGTCAAACAGGATCTTGCTGGTGCACGAAATGATATGATCAAGCATGCTCGCTCAGTGAC
TGTCTTTGGTCATGCCAATGGGGTGCCTCGCCTGAATGATATGAGCGTATTACGTGTTCT
GGATCTGGAAGGCTGCAATGGTCCATTATGCCTCGATGGCCTCTGCAAATTGATTCTTTT
GAGGTACCTGAACCTCAGGGGAACTGATGTCAGCGAGCTCCCAGCACAAATTGGGGAGCT
TAGGTGCCTGGAGACACTTGATGTGAGATCTACGAAGGTGAAAGAGCTACCTGCCAGCAT
TGTCAGCTTGGAAAAGCTAATGCATTTGCTTGCTGGAAATGCTAAGTTGCCTGGCGAGAT
CAGTAAGATGAACGGCCTACTAACGTTGTCATGCGCCAACGTCTGGAAGAACACAGGGAG
TGTCTTGCCAGAACTTGCTGATCTTGCAAACTTGAGGGAATTGGAACTGTTTTGTGATGC
TTCTGAAATCTCTGGTGATAATAAGACACGAGTCTCTTTTTCTAGCGACGGATTCAAAAG
GCTTAAGCAGCTGAGCATCCAGGGCAGCTTGCCATCAGTGGCCTTTGTTAACAGTTCCTT
GCGAAAGGTTGAAGTTCTTGAGCTGAAGTACGAAAAAGGCATTTCAGATGGGTCAAATGG
TGTGTCTGGTATAGAGCATTTGCCTAGCCTGAAGCATGTATTGATTGAGTTCTCGCAGAA
GGATGCTGGCGCCACTGCGACAATCGCTTCTGTGAGGAACGCCGCTGAGATGGTTCACCC
TAATCATCCAGATGTCTCTGTCAAAGTTGATGGAAAGGCCATCTGATACGGTCTGGAGTT
TGTTTCAGAGCAAGAGGGATATAGTACACACTTGCACGGTACTTTCTGCCGGATTTCTTT
GTTGTGTTGAATTGAGTTTTGAGTTAATGCCATTCTTTGTCACTCTGCTTATATATGTAT
GACCATGTCGTCGTTTTCTCAAAAGTACTTTGTTGCAGCAGCAACAGCATCAACTGCTTG
CCCTATAGGGATGTTTTGTTGAAGAAGTTATATACTGATGTTTTTACAGTGA
clustalw multiple alignements is not computed in this case