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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5633#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2947 fasta sequence
[GACGGCGGGGGCGATGAGCCTGCTCCTCAAGAAGGTCTGCGAGCTGCTCATGGCTGAGCTCAACCTGGACAAGAAGTTGACGAAGAGCATCGGAGATCTCCGGACGGAGCTGACCATGATGCACGGCGTCGTGCGCTGGATCGGCGAAGTGCCACCGGAGCAACTCGACGGGCAGGTGAGGCTGTGGGCGCGGCAGGTCCGCGAGATCTCCTACGACATGGAGGACGCCGTCGACGCCTACCTGGTGCGCGTCGCCGACGGCGAGCCGGAGGCAGCCAAGCAGAACCGGCGGCTCAGCGAGTCCCTGAAGAGAGCCGCCCGGTTGTTCACCAAGGGCAGGGCTCTCCATCAGATCGCCGGCGCCGTGGAAGAAGCCCAGGGCCGCGGCAAGTCGCTGTCCGACCTGCGTCAGAAGTACGGCGGCCTCAAGCTGCACGGCGCCGGCGAGGGGTGCGCCGCCATTGACCCTCGGCTCACAGCTCTGTACGTCGAGGTGGCCAAGCTCGTCAGCGTCGACAAGGCCAGGGACGAGCTGAGCGAGCTGCTGCTGTCTTCTTCAGGTGGCTCGATGCAGCAGCAGCAGCAGCTGAGGACGGTCTCGGTCTTTGGATTTGGCGGGCTGGGGAAGACGACTCTTGCCAGAGCGGTTTATGAGAGCATCAGGGAGCAATTTGATTGCGCTGCTTTTGTTTCCGTGTCCAGGAATCCCAACATCACCAAGATTTTCAGGAAATTGCTGTTTGAACTTGACCGGGAACAGTACTCAGACATCAATGATTTAGACAGAGATGATGTACAGCTAATTGATGAGCTGAGAAGTTTTCTCCAGAGTAGAAGGTACCTCATTGTAATTGATGACCTCTGGGATGAAAATGTGTGGAAATTCATCAAGTGTGTTTTATATGAGAACAATCTCAGCAGTCGAATAATCACAACAACACGCAAAATCAATGTCTCTAAAGCTTGTTGCTCTTCGGGTGATGACAAGATTTATGAAATGAAACGTCTTTCGGATGATGATTCCAAGAAGCTCTTATACACAAGGATATTTACCCATGAGAACAACTGTCCTCATGAATTGAAACAAGTATCTACAGACATTTTGAAGAAATGTGACGGGGTACCATTAGCAATCATCACTATAGCTAGTCTGTTGGCCGGTAATAATAATAGGCCCATAAAAACTAAGGATCAATGGCACAATTTGCTCAATTCTATTGGCCGGGGACTCACAGTAGGTGAAGGTGTGGATGATATGCAGAAGATATTATCATTTAGCTACTATGATTTACCTCCTCATCTGAAGACATGTTTACTGTATTTAAGTATATTTCCAGAAGATTATGAAATTGAGAGAGATCGGTTAATATGGAGGTGGATAGCTGAAGATTTTGTCCAATGTGAAAATAATTGGGACAACTTATTTGAGGTCGGAGAGAGTTACTTCAATGAGCTTATAAACAGAAGCATGGTTGAGCCAGTCGGCATCGACTTTGAAGGCAGAGCTCAAGCTTGTCGCGTGCATGATATGATGCTTGATTTTATCCTTTCCCTATCAAAAGAAGAAAATTTTATTACTATAATAGATGACAGTGAGCACAGAACATCTTGGCAACATAAGAATGATAATAAGATTCGCAGGTTAGCCATCCAAAACACTTGAAGAATGGCAGAAGAGGCTACAGCAAGCAGCATGTCACAAGTGAGATCCTTCACTTTGTTCAGACCTGGTGTTAATTCGATGCCATCCCTGTCACTGTTTCAGGTTCTTCGTGTACTGGATTTAGAAGGCTGTGATCTCAGTAAATTTAGCAATCTTAATCTGAGGCATGTCGGTAAGCTCTCTCACCTGAGGTACCTTGGGCTAAGACGAACATACATCGCTGAGCTCCCTACAGAGATCGGAAATCTGAAGGTTTTGCAGACGCTGGACATCAGAGGAGCTCATGGCATACGGGAGTTGCCGCCCGCGATCACCGGGCTGAGGCAATTGATGTGCCTTCGCCTCGATTGGGACACCAGGCTACCAAGAAATGGTGGGCTCGCAACCCTGACGTCGCTGGAGGAGATGACCGGGCTCAGAGTTCGCCGTGATTCTGCAGACGGCGTCGTCAGAGAGCTTCGCTGTCTGAAGAAGCTCAGGGTGCTCCGGCTCCAGTGGGGAGAGATGGAGCACGGCGCGGGCAGAGCTGTGGTGGGGGCTCTCGGCGAGCTGCAGGGGATCCAGAGCATCGAGATTTACGCTTACGGCGGTGGCGGCGGCGGCGTCGGTAACGTCGGCGACGGCTGGGTGCCTCCGGCGTGCCTCCGCCGGTTCGTGTCGAACGGGCCCACGAGCGCGTTCTCGGCGCTGCCGGCGTGGGTGCGCTGCTCGCCTCTGCCGCGCCTCGCCTTCCTCGACGTGTGGGTGGATCGGGTGAGGCGGGGCGACATCGGCGTCGTCGGGGAGCTGCCGGCCCTCCAGTCTCTCCGGCTGCGGGCCACCGGCCGGATAGACGCGCGCCCGGCGGTGGAGCGGTTCGCGGTGCGCGCCGGCGCGTTCCCCTGCGCGGCGGCGTGCGCGCTCCTGCACTTCGTGACGGCGCCGTCCATGTTCCCGCGAGGCGCCATGCCGAGGGTTCGGCGGCTCTCGTTCAGCCTCAGGGCATGGGACTTCGCCGCCGCCGGCGATGGCGGCGGTGGTGGTGGGCTTAGGCTTGGGCTGCGCGATCTGGGCATGCAGAACCTCCCTTCGCTCGAGGACGTTCGCGTCGAGGTTTGGTACAAGAACACGGGAGATGGCGGTGGTTCGGCGGTGACGAGGAAGGTGGAGGAGGCACTGCGACGCGTGGCGGCCGTCCATCCCAACCGTCCGGCCATCAACATCCGCAGGAGGAAGATGACGACTGGATCGGCCCAATCCGATTCTTCCACTTTGTCTATCTAAATCCAGTCAATAATAATCGGC]
[+] EMBL AK073480 [GACGGCGGGGGCGATGAGCCTGCTCCTCAAGAAGGTCTGCGAGCTGCTCATGGCTGAGCTCAACCTGGACAAGAAGTTGACGAAGAGCATCGGAGATCTCCGGACGGAGCTGACCATGATGCACGGCGTCGTGCGCTGGATCGGCGAAGTGCCACCGGAGCAACTCGACGGGCAGGTGAGGCTGTGGGCGCGGCAGGTCCGCGAGATCTCCTACGACATGGAGGACGCCGTCGACGCCTACCTGGTGCGCGTCGCCGACGGCGAGCCGGAGGCAGCCAAGCAGAACCGGCGGCTCAGCGAGTCCCTGAAGAGAGCCGCCCGGTTGTTCACCAAGGGCAGGGCTCTCCATCAGATCGCCGGCGCCGTGGAAGAAGCCCAGGGCCGCGGCAAGTCGCTGTCCGACCTGCGTCAGAAGTACGGCGGCCTCAAGCTGCACGGCGCCGGCGAGGGGTGCGCCGCCATTGACCCTCGGCTCACAGCTCTGTACGTCGAGGTGGCCAAGCTCGTCAGCGTCGACAAGGCCAGGGACGAGCTGAGCGAGCTGCTGCTGTCTTCTTCAGGTGGCTCGATGCAGCAGCAGCAGCAGCTGAGGACGGTCTCGGTCTTTGGATTTGGCGGGCTGGGGAAGACGACTCTTGCCAGAGCGGTTTATGAGAGCATCAGGGAGCAATTTGATTGCGCTGCTTTTGTTTCCGTGTCCAGGAATCCCAACATCACCAAGATTTTCAGGAAATTGCTGTTTGAACTTGACCGGGAACAGTACTCAGACATCAATGATTTAGACAGAGATGATGTACAGCTAATTGATGAGCTGAGAAGTTTTCTCCAGAGTAGAAGGTACCTCATTGTAATTGATGACCTCTGGGATGAAAATGTGTGGAAATTCATCAAGTGTGTTTTATATGAGAACAATCTCAGCAGTCGAATAATCACAACAACACGCAAAATCAATGTCTCTAAAGCTTGTTGCTCTTCGGGTGATGACAAGATTTATGAAATGAAACGTCTTTCGGATGATGATTCCAAGAAGCTCTTATACACAAGGATATTTACCCATGAGAACAACTGTCCTCATGAATTGAAACAAGTATCTACAGACATTTTGAAGAAATGTGACGGGGTACCATTAGCAATCATCACTATAGCTAGTCTGTTGGCCGGTAATAATAATAGGCCCATAAAAACTAAGGATCAATGGCACAATTTGCTCAATTCTATTGGCCGGGGACTCACAGTAGGTGAAGGTGTGGATGATATGCAGAAGATATTATCATTTAGCTACTATGATTTACCTCCTCATCTGAAGACATGTTTACTGTATTTAAGTATATTTCCAGAAGATTATGAAATTGAGAGAGATCGGTTAATATGGAGGTGGATAGCTGAAGATTTTGTCCAATGTGAAAATAATTGGGACAACTTATTTGAGGTCGGAGAGAGTTACTTCAATGAGCTTATAAACAGAAGCATGGTTGAGCCAGTCGGCATCGACTTTGAAGGCAGAGCTCAAGCTTGTCGCGTGCATGATATGATGCTTGATTTTATCCTTTCCCTATCAAAAGAAGAAAATTTTATTACTATAATAGATGACAGTGAGCACAGAACATCTTGGCAACATAAGAATGATAATAAGATTCGCAGGTTAGCCATCCAAAACACTTGAAGAATGGCAGAAGAGGCTACAGCAAGCAGCATGTCACAAGTGAGATCCTTCACTTTGTTCAGACCTGGTGTTAATTCGATGCCATCCCTGTCACTGTTTCAGGTTCTTCGTGTACTGGATTTAGAAGGCTGTGATCTCAGTAAATTTAGCAATCTTAATCTGAGGCATGTCGGTAAGCTCTCTCACCTGAGGTACCTTGGGCTAAGACGAACATACATCGCTGAGCTCCCTACAGAGATCGGAAATCTGAAGGTTTTGCAGACGCTGGACATCAGAGGAGCTCATGGCATACGGGAGTTGCCGCCCGCGATCACCGGGCTGAGGCAATTGATGTGCCTTCGCCTCGATTGGGACACCAGGCTACCAAGAAATGGTGGGCTCGCAACCCTGACGTCGCTGGAGGAGATGACCGGGCTCAGAGTTCGCCGTGATTCTGCAGACGGCGTCGTCAGAGAGCTTCGCTGTCTGAAGAAGCTCAGGGTGCTCCGGCTCCAGTGGGGAGAGATGGAGCACGGCGCGGGCAGAGCTGTGGTGGGGGCTCTCGGCGAGCTGCAGGGGATCCAGAGCATCGAGATTTACGCTTACGGCGGTGGCGGCGGCGGCGTCGGTAACGTCGGCGACGGCTGGGTGCCTCCGGCGTGCCTCCGCCGGTTCGTGTCGAACGGGCCCACGAGCGCGTTCTCGGCGCTGCCGGCGTGGGTGCGCTGCTCGCCTCTGCCGCGCCTCGCCTTCCTCGACGTGTGGGTGGATCGGGTGAGGCGGGGCGACATCGGCGTCGTCGGGGAGCTGCCGGCCCTCCAGTCTCTCCGGCTGCGGGCCACCGGCCGGATAGACGCGCGCCCGGCGGTGGAGCGGTTCGCGGTGCGCGCCGGCGCGTTCCCCTGCGCGGCGGCGTGCGCGCTCCTGCACTTCGTGACGGCGCCGTCCATGTTCCCGCGAGGCGCCATGCCGAGGGTTCGGCGGCTCTCGTTCAGCCTCAGGGCATGGGACTTCGCCGCCGCCGGCGATGGCGGCGGTGGTGGTGGGCTTAGGCTTGGGCTGCGCGATCTGGGCATGCAGAACCTCCCTTCGCTCGAGGACGTTCGCGTCGAGGTTTGGTACAAGAACACGGGAGATGGCGGTGGTTCGGCGGTGACGAGGAAGGTGGAGGAGGCACTGCGACGCGTGGCGGCCGTCCATCCCAACCGTCCGGCCATCAACATCCGCAGGAGGAAGATGACGACTGGATCGGCCCAATCCGATTCTTCCACTTTGTCTATCTAAATCCAGTCAATAATAATCGGC]
[-] EMBL AK063738 [ TATCAAAAGAAGAAAATTTTATTACTATAATAGATGACAGTGAGCACAGAACATCTTGGCAACATAAGAATGATAATAAGATTCGCAGGTTAGCCATCCAAAACACTTGAAGAATGGCAGAAGAGGCTACAGCAAGCAGCATGTCACAAGTGAGATCCTTCACTTTGTTCAGACCTGGTGTTAATTCGATGCCATCCCTGTCACTGTTTCAGGTTCTTCGTGTACTGGATTTAGAAGGCTGTGATCTCAGTAAATTTAGCAATCTTAATCTGAGGCATGTCGGTAAGCTCTCTCACCTGAGGTACCTTGGGCTAAGACGAACATACATCGCTGAGCTCCCTACAGAGATCGGAAATCTGAAGGTTTTGCAGACGCTGGACATCAGAGGAGCTCATGGCATACGGGAGTTGCCGCCCGCGATCACCGGGCTGAGGCAATTGATGTGCCTTCGCCTCGATTGGGACACCAGGCTACCAAGAAATGGTGGGCTCGCAACCCTGACGTCGCTGGAGGAGATGACCGGGCTCAGAGTTCGCCGTGATTCTGCAGACGGCGTCGTCAGAGAGCTTCGCTGTCTGAAGAAGCTCAGGGTGCTCCGGCTCCAGTGGGGAGAGATGGAGCACGGCGCGGGCAGAGCTGTGGTGGGGGCTCTCGGCGAGCTGCAGGGGATCCAGAGCATCGAGATTTACGCTTACGGCGGTGGCGGCGGCGGCGTCGGTAACGTCGGCGACGGCTGGGTGCCTCCGGCGTGCCTCCGCCGGTTCGTGTCGAACGGGCCCACGAGCGCGTTCTCGGCGCTGCCGGCGTGGGTGCGCTGCTCGCCTCTGCCGCGCCTCGCCTTCCTCGACGTGTGGGTGGATCGGGTGAGGCGGGGCGACATCGGCGTCGTCGGGGAGCTGCCGGCCCTCCAGTCTCTCCGGCTGCGGGCCACCGGCCGGATAGACGCGCGCCCGGCGGTGGAGCGGTTCGCGGTGCGCGCCGGCGCGTTCCCCTGCGCGGCGGCGTGCGCGCTCCTGCACTTCGTGACGGCGCCGTCCATGTTCCCGCGAGGCGCCATGCCGAGGGTTCGGCGGCTCTCGTTCAGCCTCAGGGCATGGGACTTCGCCGCCGCCGGCGATGGCGGCGGTGGTGGTGGGCTTAGGCTTGGGCTGCGCGATCTGGGCATGCAGAACCTCCCTTCGCTCGAGGACGTTCGCGTCGAGGTTTGGTACAAGAACACGGGAGATGGCGGTGGTTCGGCGGTGACGAGGAAGGTGGAGGAGGCACTGCGACGCGTGGCGGCCGTCCATCCCAACCGTCCGGCCATCAACATCCGCAG ]
consensusID : consensus_5633#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2472 fasta sequence
[CACATCATTTTACTTTACATTTGAACATCATTCTACAAATCATTTTAATTTAAATCATATCAACTTATGAAAACTTATGTTTATGTAATATTTATGTAAGCTTATGTTGGTTAAGCTATCTTACACATTATTTCGACTTATTGTTATCATAGTAAATTCCTGCAATAACGTGTGGGTTTCACCTAGTTATTAATGTAGGAGTGCTGACAATCATTTTGCTTTCTTTCATAAAACAGTTACAGCCTTGTTTATTTCGTGAAAAAAAAATTTGGGTGTCACATCGGATGTTTGATTGGATGTTGGAAGGTGTTTTCGGACACGAAAGAAAAAACTAATTTCATAACTCGCCCAGAAACCGCAAGACGGATCTTTTGGGCCTAATTAAGCCGTCATTAGCACATGTGGGGTACTGTAGCACTTATGGCTAATCATGAACTAATTAGGCTCAAAAGATTCGTCTCGCGATTTCCGTGCAAACTGTGCAATTAGTTTTGTTTTTATCTATATTTAATGTTTCATGCATGTGTCCAAAGATTCGATGTGACATTTTTGGGAAAAAAATTTTGGGAACTAAACCAGGCCTACATTTCACTGATTTACCCAATTAATGCCTTGTTACAAATGTAGGTACCTCATTGTAATTGATGACCTCTGGGATGAAAATGTGTGGAAATTCATCAAGTGTGTTTTATATGAGAACAATCTCAGCAGTCGAATAATCACAACAACACGCAAAATCAATGTCTCTAAAGCTTGTTGCTCTTCGGGTGATGACAAGATTTATGAAATGAAACGTCTTTCGGATGATGATTCCAAGAAGCTCTTATACACAAGGATATTTACCCATGAGAACAACTGTCCTCATGAATTGAAACAAGTATCTACAGACATTTTGAAGAAATGTGACGGGGTACCATTAGCAATCATCACTATAGCTAGTCTGTTGGCCGGTAATAATAATAGGCCCATAAAAACTAAGGATCAATGGCACAATTTGCTCAATTCTATTGGCCGGGGACTCACAGTAGGTGAAGGTGTGGATGATATGCAGAAGATATTATCATTTAGCTACTATGATTTACCTCCTCATCTGAAGACATGTTTACTGTATCTAAGTATATTTCCAGAAGATTATGAAATTGAGAGAGATCGGTTAATATGGAGGTGGATAGCTGAAGATTTTGTCCAATGTGAAAATAATTGGGACAACTAATTTGAGGTCGGAGAGAGTTACTTCAATGAGCTTATAAACAGAAGCATGGTTGAGCCAGTCGGCATCGACTTTGAAGGCAGAGCTCAAGCTTGTCGCGTGCATGATATGATGCTTGATTTTATCCTTTCCCTATCAAAAGAAGAAAATTTTATTACTATAATAGATGACAGTGAGCACAGAACATCTTGGCAACATAAGAATGATAATAAGATTCGCAGGTTAGCCATCCAAAACACTTGAAGAATGGCAGAAGAGGCTACAGCAAGCAGCATGTCACAAGTGAGATCCTTCACTTTGTTCAGACCTGGTGTTAATTCGATGCCATCCCTGTCACTGTTTCAGGTTCTTCGTGTACTTGGGCTAAGACGAACATACATCGCTGAGCTCCCTACAGAGATCGGAAATCTGAAGGTTTTGCAGACGCTGGACATCAGAGGAGCTCATGGCATACGGGAGTTGCCGCCCGCGATCACCGGGCTGAGGCAATTGATGTGCCTTCGCCTCGATTGGGACACCAGGCTACCAAGAAATGGTGGGCTCGCAACCCTGACGTCGCTGGAGGAGATGACCGGGCTCAGAGTTCGCCGTGATTCTGCAGACGGCGTCGTCAGAGAGCTTCGCTGTCTGAAGAAGCTCAGGGTGCTCCGGCTCCAGTGGGGAGAGATGGAGCACGGCGCGGGCAGAGCTGTGGTGGGGGCTCTCGGCGAGCTGCAGGGGATCCAGAGCATCGAGATTTACGCTTACGGCGGTGGCGGCGGCGGCGTCGGTAACGTCGGCGACGGCTGGGTGCCTCCGGCGTGCCTCCGCCGGTTCGTGTCGAACGGGCCCACGAGCGCGTTCTCGGCGCTGCCGGCGTGGGTGCGCTGCTCGCCTCTGCCGCGCCTCGCCTTCCTCGACGTGTGGGTGGATCGGGTGAGGCGGGGCGACATCGGCGTCGTCGGGGAGCTGCCGGCCCTCCAGTCTCTCCGGCTGCGGGCCACCGGCCGGATAGACGCGCGCCCGGCGGTGGAGCGGTTCGCGGTGCGCGCCGGCGCGTTCCCCTGCGCGGCGGCGTGCGCGCTCCTGCACTTCGTGACGGCGCCGTCCATGTTCCCGCGAGGCGCCATGCCGAGGGTTCGGCGGCTCTCGTTCAGCCTCAGGGCATGGGACTTCGCCGCCGCCGGCGATGGCGGCGGTGGTGGTGGGCTTAGGCTTGGGCTGCGCGATCTGGGCATGCAGAACCTCCCTTCGCTCGAGGACGTTCGCGTCGAGGTTTGGTA]
[-] EMBL AK063539 [CACATCATTTTACTTTACATTTGAACATCATTCTACAAATCATTTTAATTTAAATCATATCAACTTATGAAAACTTATGTTTATGTAATATTTATGTAAGCTTATGTTGGTTAAGCTATCTTACACATTATTTCGACTTATTGTTATCATAGTAAATTCCTGCAATAACGTGTGGGTTTCACCTAGTTATTAATGTAGGAGTGCTGACAATCATTTTGCTTTCTTTCATAAAACAGTTACAGCCTTGTTTATTTCGTGAAAAAAAAATTTGGGTGTCACATCGGATGTTTGATTGGATGTTGGAAGGTGTTTTCGGACACGAAAGAAAAAACTAATTTCATAACTCGCCCAGAAACCGCAAGACGGATCTTTTGGGCCTAATTAAGCCGTCATTAGCACATGTGGGGTACTGTAGCACTTATGGCTAATCATGAACTAATTAGGCTCAAAAGATTCGTCTCGCGATTTCCGTGCAAACTGTGCAATTAGTTTTGTTTTTATCTATATTTAATGTTTCATGCATGTGTCCAAAGATTCGATGTGACATTTTTGGGAAAAAAATTTTGGGAACTAAACCAGGCCTACATTTCACTGATTTACCCAATTAATGCCTTGTTACAAATGTAGGTACCTCATTGTAATTGATGACCTCTGGGATGAAAATGTGTGGAAATTCATCAAGTGTGTTTTATATGAGAACAATCTCAGCAGTCGAATAATCACAACAACACGCAAAATCAATGTCTCTAAAGCTTGTTGCTCTTCGGGTGATGACAAGATTTATGAAATGAAACGTCTTTCGGATGATGATTCCAAGAAGCTCTTATACACAAGGATATTTACCCATGAGAACAACTGTCCTCATGAATTGAAACAAGTATCTACAGACATTTTGAAGAAATGTGACGGGGTACCATTAGCAATCATCACTATAGCTAGTCTGTTGGCCGGTAATAATAATAGGCCCATAAAAACTAAGGATCAATGGCACAATTTGCTCAATTCTATTGGCCGGGGACTCACAGTAGGTGAAGGTGTGGATGATATGCAGAAGATATTATCATTTAGCTACTATGATTTACCTCCTCATCTGAAGACATGTTTACTGTATCTAAGTATATTTCCAGAAGATTATGAAATTGAGAGAGATCGGTTAATATGGAGGTGGATAGCTGAAGATTTTGTCCAATGTGAAAATAATTGGGACAACTAATTTGAGGTCGGAGAGAGTTACTTCAATGAGCTTATAAACAGAAGCATGGTTGAGCCAGTCGGCATCGACTTTGAAGGCAGAGCTCAAGCTTGTCGCGTGCATGATATGATGCTTGATTTTATCCTTTCCCTATCAAAAGAAGAAAATTTTATTACTATAATAGATGACAGTGAGCACAGAACATCTTGGCAACATAAGAATGATAATAAGATTCGCAGGTTAGCCATCCAAAACACTTGAAGAATGGCAGAAGAGGCTACAGCAAGCAGCATGTCACAAGTGAGATCCTTCACTTTGTTCAGACCTGGTGTTAATTCGATGCCATCCCTGTCACTGTTTCAGGTTCTTCGTGTACTTGGGCTAAGACGAACATACATCGCTGAGCTCCCTACAGAGATCGGAAATCTGAAGGTTTTGCAGACGCTGGACATCAGAGGAGCTCATGGCATACGGGAGTTGCCGCCCGCGATCACCGGGCTGAGGCAATTGATGTGCCTTCGCCTCGATTGGGACACCAGGCTACCAAGAAATGGTGGGCTCGCAACCCTGACGTCGCTGGAGGAGATGACCGGGCTCAGAGTTCGCCGTGATTCTGCAGACGGCGTCGTCAGAGAGCTTCGCTGTCTGAAGAAGCTCAGGGTGCTCCGGCTCCAGTGGGGAGAGATGGAGCACGGCGCGGGCAGAGCTGTGGTGGGGGCTCTCGGCGAGCTGCAGGGGATCCAGAGCATCGAGATTTACGCTTACGGCGGTGGCGGCGGCGGCGTCGGTAACGTCGGCGACGGCTGGGTGCCTCCGGCGTGCCTCCGCCGGTTCGTGTCGAACGGGCCCACGAGCGCGTTCTCGGCGCTGCCGGCGTGGGTGCGCTGCTCGCCTCTGCCGCGCCTCGCCTTCCTCGACGTGTGGGTGGATCGGGTGAGGCGGGGCGACATCGGCGTCGTCGGGGAGCTGCCGGCCCTCCAGTCTCTCCGGCTGCGGGCCACCGGCCGGATAGACGCGCGCCCGGCGGTGGAGCGGTTCGCGGTGCGCGCCGGCGCGTTCCCCTGCGCGGCGGCGTGCGCGCTCCTGCACTTCGTGACGGCGCCGTCCATGTTCCCGCGAGGCGCCATGCCGAGGGTTCGGCGGCTCTCGTTCAGCCTCAGGGCATGGGACTTCGCCGCCGCCGGCGATGGCGGCGGTGGTGGTGGGCTTAGGCTTGGGCTGCGCGATCTGGGCATGCAGAACCTCCCTTCGCTCGAGGACGTTCGCGTCGAGGTTTGGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5633#0 GACGGCGGGGGCGATGAGCCTGCTCCTCAAGAAGGTCTGCGAGCTGCTCATGGCTGAGCT 60
consensus_5633#1 ------------------------------------------------------------
consensus_5633#0 CAACCTGGACAAGAAGTTGACGAAGAGCATCGGAGATCTCCGGACGGAGCTGACCATGAT 120
consensus_5633#1 ------------------------------------------------------------
consensus_5633#0 GCACGGCGTCGTGCGCTGGATCGGCGAAGTGCCAC-CGGAGCAACTCGAC---GGGCAGG 176
consensus_5633#1 -CACATCATTTTACTTTACATTTGAACATCATTCTACAAATCATTTTAATTTAAATCATA 59
*** * * * * * ** * * * * ** * * **
consensus_5633#0 TGAGGCTGTGGGCGCGGCAGGTCCGCGAGATCTCCTACGACATGGAGGACGCCGTCGACG 236
consensus_5633#1 TCAACTTATGAAAACT-TATGTTTATGTAATATT-TATGTAA--GCTTATGTTGGTTAAG 115
* * * ** * * ** * ** * ** * * * * * * * *
consensus_5633#0 CCTACCTGGTGCGCGTCGCCGACGGCGAGCCGGAGGCAGCCAAGCAGAACCGGCGGCTCA 296
consensus_5633#1 C-TATCT--TACACATT----ATTTCGACTTATTGTTATCATAGTAAATTC-------CT 161
* ** ** * * * * * *** * * * ** * * * *
consensus_5633#0 GCGAGTCCCTGAAGAGAGCCGCCCGGTTGTTCACCAAGGGCAGGGCTCTCCATCAGATCG 356
consensus_5633#1 GCAATAACGTGTGG-GTTTCACCTAGTTATTAATGTAGG--AGTGCTGACAATCATTTTG 218
** * * ** * * * ** *** ** * *** ** *** * **** * *
consensus_5633#0 CCGGCGCCGTGGAAGAAGCCCAGGGCCGCGGCAAGTCGCTGTCCGACCTGCGTCAGAAGT 416
consensus_5633#1 CTTTC-TTTCATAAAACAGTTACAGCC-----------TTGTTTATTTCGTGAAAAAAAA 266
* * ** * * *** *** * * * **
consensus_5633#0 ACGGCGGCCTCAAGCTGCACGGCGCCGGCGAGGGGTGCGCCGCCATTGACCCTCGGCTCA 476
consensus_5633#1 ATTTGGGTGTCACATCGGATGTT--TGATTGGATGTTGGAAGGTGTT----TTCGGA-CA 319
* ** *** * * * * * ** * * ** **** **
consensus_5633#0 CAGCTCTGTACGTCGAGGTGGCCAAGCTCGTC-AGCGTCGACAAGGCCAGGGACGAGCTG 535
consensus_5633#1 CGAAAGAAAAAACTAA--TTTCATAACTCGCCCAGAAACCGCAAGAC---GGATCTTTTG 374
* * * * * * **** * ** * **** * *** **
consensus_5633#0 AGCGAGCTGCTGCTGTCTTCTTCAGGTGGCTCGATGCAGCAGCAGCAGCAGCTGAGGACG 595
consensus_5633#1 GGCCTAATTAAGCCGTCATTAGCACATG-TGGGGTACTGTAGCACTTATGGCTAATCATG 433
** * ** *** * ** ** * * * * **** *** * * *
consensus_5633#0 GTCTCGGTCTTTGGATTTGGCGGGCTGGGGAAGACGACTCTTGCCAGAGCGGTTTATGAG 655
consensus_5633#1 AACTAA----TTAGGCTCAAAAGATT--------CGTCTC--------GCGATTTCCGTG 473
** ** * * * * ** *** *** *** * *
consensus_5633#0 AGCATCAGGGAGCAATTTGATTGCGCTGCTTTTGTTTCCGTGTCCAGGAATCCCAACATC 715
consensus_5633#1 CAAACT---GTGCAATTAGTTT----TGTTTTTATCT--ATATTTAATGTTTCATGCAT- 523
* * ****** * ** ** **** * * * * * * * ***
consensus_5633#0 ACCAAGATTTTCAGGAAATTGCTGTTTGAACTTGACCGGGAACAGTACTCAGACATCAAT 775
consensus_5633#1 ------GTGTCCAAAGATTCGATGT---GACATTTTTGGGAAAAAAATTTTGG------- 567
* * ** * * * *** ** * ***** * * * *
consensus_5633#0 GATTTAGACAGAGATGATGTACAGCTAATTGATGAGCTGAGAAGTTTTCTCCAGAGTAGA 835
consensus_5633#1 GAACTAAACCAGGCCTACATTTCACTGATTTACCCAATTAATGCCTTGTTACAAAT--GT 625
** ** ** * * * ** *** * * * ** * ** * *
consensus_5633#0 AGGTACCTCATTGTAATTGATGACCTCTGGGATGAAAATGTGTGGAAATTCATCAAGTGT 895
consensus_5633#1 AGGTACCTCATTGTAATTGATGACCTCTGGGATGAAAATGTGTGGAAATTCATCAAGTGT 685
************************************************************
consensus_5633#0 GTTTTATATGAGAACAATCTCAGCAGTCGAATAATCACAACAACACGCAAAATCAATGTC 955
consensus_5633#1 GTTTTATATGAGAACAATCTCAGCAGTCGAATAATCACAACAACACGCAAAATCAATGTC 745
************************************************************
consensus_5633#0 TCTAAAGCTTGTTGCTCTTCGGGTGATGACAAGATTTATGAAATGAAACGTCTTTCGGAT 1015
consensus_5633#1 TCTAAAGCTTGTTGCTCTTCGGGTGATGACAAGATTTATGAAATGAAACGTCTTTCGGAT 805
************************************************************
consensus_5633#0 GATGATTCCAAGAAGCTCTTATACACAAGGATATTTACCCATGAGAACAACTGTCCTCAT 1075
consensus_5633#1 GATGATTCCAAGAAGCTCTTATACACAAGGATATTTACCCATGAGAACAACTGTCCTCAT 865
************************************************************
consensus_5633#0 GAATTGAAACAAGTATCTACAGACATTTTGAAGAAATGTGACGGGGTACCATTAGCAATC 1135
consensus_5633#1 GAATTGAAACAAGTATCTACAGACATTTTGAAGAAATGTGACGGGGTACCATTAGCAATC 925
************************************************************
consensus_5633#0 ATCACTATAGCTAGTCTGTTGGCCGGTAATAATAATAGGCCCATAAAAACTAAGGATCAA 1195
consensus_5633#1 ATCACTATAGCTAGTCTGTTGGCCGGTAATAATAATAGGCCCATAAAAACTAAGGATCAA 985
************************************************************
consensus_5633#0 TGGCACAATTTGCTCAATTCTATTGGCCGGGGACTCACAGTAGGTGAAGGTGTGGATGAT 1255
consensus_5633#1 TGGCACAATTTGCTCAATTCTATTGGCCGGGGACTCACAGTAGGTGAAGGTGTGGATGAT 1045
************************************************************
consensus_5633#0 ATGCAGAAGATATTATCATTTAGCTACTATGATTTACCTCCTCATCTGAAGACATGTTTA 1315
consensus_5633#1 ATGCAGAAGATATTATCATTTAGCTACTATGATTTACCTCCTCATCTGAAGACATGTTTA 1105
************************************************************
consensus_5633#0 CTGTATTTAAGTATATTTCCAGAAGATTATGAAATTGAGAGAGATCGGTTAATATGGAGG 1375
consensus_5633#1 CTGTATCTAAGTATATTTCCAGAAGATTATGAAATTGAGAGAGATCGGTTAATATGGAGG 1165
****** *****************************************************
consensus_5633#0 TGGATAGCTGAAGATTTTGTCCAATGTGAAAATAATTGGGACAACTTATTTGAGGTCGGA 1435
consensus_5633#1 TGGATAGCTGAAGATTTTGTCCAATGTGAAAATAATTGGGACAACTAATTTGAGGTCGGA 1225
********************************************** *************
consensus_5633#0 GAGAGTTACTTCAATGAGCTTATAAACAGAAGCATGGTTGAGCCAGTCGGCATCGACTTT 1495
consensus_5633#1 GAGAGTTACTTCAATGAGCTTATAAACAGAAGCATGGTTGAGCCAGTCGGCATCGACTTT 1285
************************************************************
consensus_5633#0 GAAGGCAGAGCTCAAGCTTGTCGCGTGCATGATATGATGCTTGATTTTATCCTTTCCCTA 1555
consensus_5633#1 GAAGGCAGAGCTCAAGCTTGTCGCGTGCATGATATGATGCTTGATTTTATCCTTTCCCTA 1345
************************************************************
consensus_5633#0 TCAAAAGAAGAAAATTTTATTACTATAATAGATGACAGTGAGCACAGAACATCTTGGCAA 1615
consensus_5633#1 TCAAAAGAAGAAAATTTTATTACTATAATAGATGACAGTGAGCACAGAACATCTTGGCAA 1405
************************************************************
consensus_5633#0 CATAAGAATGATAATAAGATTCGCAGGTTAGCCATCCAAAACACTTGAAGAATGGCAGAA 1675
consensus_5633#1 CATAAGAATGATAATAAGATTCGCAGGTTAGCCATCCAAAACACTTGAAGAATGGCAGAA 1465
************************************************************
consensus_5633#0 GAGGCTACAGCAAGCAGCATGTCACAAGTGAGATCCTTCACTTTGTTCAGACCTGGTGTT 1735
consensus_5633#1 GAGGCTACAGCAAGCAGCATGTCACAAGTGAGATCCTTCACTTTGTTCAGACCTGGTGTT 1525
************************************************************
consensus_5633#0 AATTCGATGCCATCCCTGTCACTGTTTCAGGTTCTTCGTGTACTGGATTTAGAAGGCTGT 1795
consensus_5633#1 AATTCGATGCCATCCCTGTCACTGTTTCAGGTTCTTCGTGTACT---------------- 1569
********************************************
consensus_5633#0 GATCTCAGTAAATTTAGCAATCTTAATCTGAGGCATGTCGGTAAGCTCTCTCACCTGAGG 1855
consensus_5633#1 ------------------------------------------------------------
consensus_5633#0 TACCTTGGGCTAAGACGAACATACATCGCTGAGCTCCCTACAGAGATCGGAAATCTGAAG 1915
consensus_5633#1 -----TGGGCTAAGACGAACATACATCGCTGAGCTCCCTACAGAGATCGGAAATCTGAAG 1624
*******************************************************
consensus_5633#0 GTTTTGCAGACGCTGGACATCAGAGGAGCTCATGGCATACGGGAGTTGCCGCCCGCGATC 1975
consensus_5633#1 GTTTTGCAGACGCTGGACATCAGAGGAGCTCATGGCATACGGGAGTTGCCGCCCGCGATC 1684
************************************************************
consensus_5633#0 ACCGGGCTGAGGCAATTGATGTGCCTTCGCCTCGATTGGGACACCAGGCTACCAAGAAAT 2035
consensus_5633#1 ACCGGGCTGAGGCAATTGATGTGCCTTCGCCTCGATTGGGACACCAGGCTACCAAGAAAT 1744
************************************************************
consensus_5633#0 GGTGGGCTCGCAACCCTGACGTCGCTGGAGGAGATGACCGGGCTCAGAGTTCGCCGTGAT 2095
consensus_5633#1 GGTGGGCTCGCAACCCTGACGTCGCTGGAGGAGATGACCGGGCTCAGAGTTCGCCGTGAT 1804
************************************************************
consensus_5633#0 TCTGCAGACGGCGTCGTCAGAGAGCTTCGCTGTCTGAAGAAGCTCAGGGTGCTCCGGCTC 2155
consensus_5633#1 TCTGCAGACGGCGTCGTCAGAGAGCTTCGCTGTCTGAAGAAGCTCAGGGTGCTCCGGCTC 1864
************************************************************
consensus_5633#0 CAGTGGGGAGAGATGGAGCACGGCGCGGGCAGAGCTGTGGTGGGGGCTCTCGGCGAGCTG 2215
consensus_5633#1 CAGTGGGGAGAGATGGAGCACGGCGCGGGCAGAGCTGTGGTGGGGGCTCTCGGCGAGCTG 1924
************************************************************
consensus_5633#0 CAGGGGATCCAGAGCATCGAGATTTACGCTTACGGCGGTGGCGGCGGCGGCGTCGGTAAC 2275
consensus_5633#1 CAGGGGATCCAGAGCATCGAGATTTACGCTTACGGCGGTGGCGGCGGCGGCGTCGGTAAC 1984
************************************************************
consensus_5633#0 GTCGGCGACGGCTGGGTGCCTCCGGCGTGCCTCCGCCGGTTCGTGTCGAACGGGCCCACG 2335
consensus_5633#1 GTCGGCGACGGCTGGGTGCCTCCGGCGTGCCTCCGCCGGTTCGTGTCGAACGGGCCCACG 2044
************************************************************
consensus_5633#0 AGCGCGTTCTCGGCGCTGCCGGCGTGGGTGCGCTGCTCGCCTCTGCCGCGCCTCGCCTTC 2395
consensus_5633#1 AGCGCGTTCTCGGCGCTGCCGGCGTGGGTGCGCTGCTCGCCTCTGCCGCGCCTCGCCTTC 2104
************************************************************
consensus_5633#0 CTCGACGTGTGGGTGGATCGGGTGAGGCGGGGCGACATCGGCGTCGTCGGGGAGCTGCCG 2455
consensus_5633#1 CTCGACGTGTGGGTGGATCGGGTGAGGCGGGGCGACATCGGCGTCGTCGGGGAGCTGCCG 2164
************************************************************
consensus_5633#0 GCCCTCCAGTCTCTCCGGCTGCGGGCCACCGGCCGGATAGACGCGCGCCCGGCGGTGGAG 2515
consensus_5633#1 GCCCTCCAGTCTCTCCGGCTGCGGGCCACCGGCCGGATAGACGCGCGCCCGGCGGTGGAG 2224
************************************************************
consensus_5633#0 CGGTTCGCGGTGCGCGCCGGCGCGTTCCCCTGCGCGGCGGCGTGCGCGCTCCTGCACTTC 2575
consensus_5633#1 CGGTTCGCGGTGCGCGCCGGCGCGTTCCCCTGCGCGGCGGCGTGCGCGCTCCTGCACTTC 2284
************************************************************
consensus_5633#0 GTGACGGCGCCGTCCATGTTCCCGCGAGGCGCCATGCCGAGGGTTCGGCGGCTCTCGTTC 2635
consensus_5633#1 GTGACGGCGCCGTCCATGTTCCCGCGAGGCGCCATGCCGAGGGTTCGGCGGCTCTCGTTC 2344
************************************************************
consensus_5633#0 AGCCTCAGGGCATGGGACTTCGCCGCCGCCGGCGATGGCGGCGGTGGTGGTGGGCTTAGG 2695
consensus_5633#1 AGCCTCAGGGCATGGGACTTCGCCGCCGCCGGCGATGGCGGCGGTGGTGGTGGGCTTAGG 2404
************************************************************
consensus_5633#0 CTTGGGCTGCGCGATCTGGGCATGCAGAACCTCCCTTCGCTCGAGGACGTTCGCGTCGAG 2755
consensus_5633#1 CTTGGGCTGCGCGATCTGGGCATGCAGAACCTCCCTTCGCTCGAGGACGTTCGCGTCGAG 2464
************************************************************
consensus_5633#0 GTTTGGTACAAGAACACGGGAGATGGCGGTGGTTCGGCGGTGACGAGGAAGGTGGAGGAG 2815
consensus_5633#1 GTTTGGTA---------------------------------------------------- 2472
********
consensus_5633#0 GCACTGCGACGCGTGGCGGCCGTCCATCCCAACCGTCCGGCCATCAACATCCGCAGGAGG 2875
consensus_5633#1 ------------------------------------------------------------
consensus_5633#0 AAGATGACGACTGGATCGGCCCAATCCGATTCTTCCACTTTGTCTATCTAAATCCAGTCA 2935
consensus_5633#1 ------------------------------------------------------------
consensus_5633#0 ATAATAATCGGC 2947
consensus_5633#1 ------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||