These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5648#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 4092 fasta sequence [CCACCGCCGCTCTCTTCGCCGCAGCGGCGCCGCGCGCAAACGCCCTCCGCCGCTAACCCTAGCGCTCCATGGCCCCCGCGGACGGCGGGGGAGAGCAGCCGCACAAGGCGCACCGGCAGCACAAGTCCGGCGCGAAGGCGAGGAAGAAGAAGGGGAAGGGGAAGGGCGGCGGCGGCGACGATGACGGTGGCGAGAGGAAGAACCCGAAGGCTTTTGCCTTTCAGTCAGCTGCAAAGGCCAAGCGTCTACAAGCACGATCGGCTGAGATTGAACAACGTCGTCTTCATGTGCCAATTATGGATCGCTCAATTGGTGAACCACCACCTTTTGTTGTTGTAGTTCAAGGGCCTCCTCAGGTTGGGAAGTCGCTGCTGATAAAATGTCTAGTAAAGCACTACACGAAACAAAATTTGTCTGAAGTCCGTGGTCCAATCACTGTTGTGTCAGGTAAAAGCAGGCGCGTACAGTTCTTGGAGTGTCCAAATGATATCAACGGAATGATTGATGCTGCTAAAATAGCTGATCTTGCTCTGCTGCTTATTGATGGAAGCTATGGATTTGAAATGGATACATTTGAGTTCCTAAATATTATGCAAGTGCACGGATTCCCCAAGGTGATGGGAGTCCTTACACATCTTGATAAGTTTAAAGATGTAAAAAAGCTTAGGAAAACCAAGCAGCGCCTGAAGCATCGATTTTGGGCTGAGATAAAGGAGGGAGCAAAACTTTTCTACTTGTCTGGTCTCATTCATGGAAAGTACACGAAAAGAGAAGTCCATAATCTTGCAAGGTTCATCTCTGTTATCAAGCCTATCCCACTGAGTTGGAGGATGGCACATCCTTATCTGCTAGTCGATAGATTTGAAGATGTAACTCCTCCAGAAAGTGTGCGCTTGAACAGAAAGTGTGACAGGAAAATAACATTGTATGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACGTTGGAGAGCAATGATCATTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATATGATGGATCTGATCTCTCCGGTGAGGAAGTTGATAATGACACAAAGAAATCGAAACGAGAAGAAACTAATGGAGGGGGCTATTTCGATAAGTTAAAGGAGGAAATTGAAATTCGCAAGCAAATGAATATTTCCGAACTCAATGATTTAGATGAAGATACCAGGGTAGAAATTGAAGGGTTTAGGACTGGTTCTTACATCAGATTAGAGGTACATGGTGTGCTGTTTGAGCTAGTTGAATATTTTGATCCTTGCCATCCCATTCTCGTTGGAGGCATTGGCCTTGGTGAGGAGAATACTGGATATATGCAGGCTAGCCTGAAACGACACAGGTGGCACAGGAAAGTACTGAAGACAAAAGACCCAATTATTGTCTCTATTGGTTGGAGGCGTTTCCAAACAACTCCTGTATATGCAATAGAGGATCGAAATGGTCGGCACCGCATGCTCAAATATACACCTGAGCATATGCATTGCTTTGCTATGTTTTGGGGACCGCTTGCTCCACCAAAAAGTGGTGTACTGGCAGTCCAGCATCTCTCCAACAGTCAGGTACCATTTAGAATTACTGCAACAGGCTTTGTTCAAGAATTCAACAATACTGCCCGAATCATGAAGAAAATCAAGCTCACAGGTGTACCGTGCAAGATATTTAAGAAAACTGCCCTAGTCAAAGGCATGTTCACATCTGACTTAGAGGTTGCTAGGTTTGAGGGTGCAACTATTCGGACGGTAAGTGGAATCCGAGGGCAAGTTAAAAAGGCAGCAAAGATTGAACCAGGAGATATGCCAAGGAGAAAAGGGGAAAGTATAGACGGGATTGCAAGGTGCACATTTGAAGACAGAATTCTTATGAGTGACATTGTCTTCATGCGTGCATGGGTCAATGTTGAAGTTCCCACCTACTGTAACCTTGTGACAACTGCTCTTCAACCCCAAGATGAGACTTGGCAAGGCATGAGAACTACTGCTGAGCTGCGGAGGGCACATAATATTCCTATACCGCACAACACAGATTCAGTTTATAAGCCCATTGAGCGGAAAGTGCGGAAGTTTAATCCTATAGAGATCCCTGCAAAACTGCAGCATCTACTTCCTTTTAAATCTAAACCGAAGGATACGCCCAAGCATAGAAAAACACCAGTGGAGAACAGGGTCCCTGTCCTTATGCAGCCCAGTGAGAAGAAGACACATGCAGCCATTCAACAGTTAAGGCTGCTAAAACATGAGAAGGCAAGGAAGAAGAAATTGCAGGATGAGAAGAAGAAGAAAGCATATGAGGCGGAGAAAGCAAAGTCTGAACTTCTAACGAAGAAGCGGCAGAGAGAGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGCAAAAGAAGCGAGCCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGAAATCTCCTGAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGCCTCCAGAAAAAAGAGGCTCGGATTGACA-GCAGACGAGGTCTGATGCCTCGGCATATCAAGCTGGAGATGCAGAACAACTTGGTATAATCTGGGCCGGATTCAACTAGTAGCGTCTTTTTTATGTAGCTAACC-AGTTTTGCTCCACCA-TGCTGCTACGAAAATTTTGTCATCCATGTAACTGATGATTTGTAGCTCCCA-GGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGACATAACA-GTTGCCCATTTTCAGGCCTATTATAATTCTAGAGCTAGGGGACACTGAGTTGTCAGCATTGGATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCCCGTTCTGCTCCCAAAAAAAA] [+] EMBL AK101050 [CCACCGCCGCTCTCTTCGCCGCAGCGGCGCCGCGCGCAAACGCCCTCCGCCGCTAACCCTAGCGCTCCATGGCCCCCGCGGACGGCGGGGGAGAGCAGCCGCACAAGGCGCACCGGCAGCACAAGTCCGGCGCGAAGGCGAGGAAGAAGAAGGGGAAGGGGAAGGGCGGCGGCGGCGACGATGACGGTGGCGAGAGGAAGAACCCGAAGGCTTTTGCCTTTCAGTCAGCTGCAAAGGCCAAGCGTCTACAAGCACGATCGGCTGAGATTGAACAACGTCGTCTTCATGTGCCAATTATGGATCGCTCAATTGGTGAACCACCACCTTTTGTTGTTGTAGTTCAAGGGCCTCCTCAGGTTGGGAAGTCGCTGCTGATAAAATGTCTAGTAAAGCACTACACGAAACAAAATTTGTCTGAAGTCCGTGGTCCAATCACTGTTGTGTCAGGTAAAAGCAGGCGCGTACAGTTCTTGGAGTGTCCAAATGATATCAACGGAATGATTGATGCTGCTAAAATAGCTGATCTTGCTCTGCTGCTTATTGATGGAAGCTATGGATTTGAAATGGATACATTTGAGTTCCTAAATATTATGCAAGTGCACGGATTCCCCAAGGTGATGGGAGTCCTTACACATCTTGATAAGTTTAAAGATGTAAAAAAGCTTAGGAAAACCAAGCAGCGCCTGAAGCATCGATTTTGGGCTGAGATAAAGGAGGGAGCAAAACTTTTCTACTTGTCTGGTCTCATTCATGGAAAGTACACGAAAAGAGAAGTCCATAATCTTGCAAGGTTCATCTCTGTTATCAAGCCTATCCCACTGAGTTGGAGGATGGCACATCCTTATCTGCTAGTCGATAGATTTGAAGATGTAACTCCTCCAGAAAGTGTGCGCTTGAACAGAAAGTGTGACAGGAAAATAACATTGTATGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACGTTGGAGAGCAATGATCATTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATATGATGGATCTGATCTCTCCGGTGAGGAAGTTGATAATGACACAAAGAAATCGAAACGAGAAGAAACTAATGGAGGGGGCTATTTCGATAAGTTAAAGGAGGAAATTGAAATTCGCAAGCAAATGAATATTTCCGAACTCAATGATTTAGATGAAGATACCAGGGTAGAAATTGAAGGGTTTAGGACTGGTTCTTACATCAGATTAGAGGTACATGGTGTGCTGTTTGAGCTAGTTGAATATTTTGATCCTTGCCATCCCATTCTCGTTGGAGGCATTGGCCTTGGTGAGGAGAATACTGGATATATGCAGGCTAGCCTGAAACGACACAGGTGGCACAGGAAAGTACTGAAGACAAAAGACCCAATTATTGTCTCTATTGGTTGGAGGCGTTTCCAAACAACTCCTGTATATGCAATAGAGGATCGAAATGGTCGGCACCGCATGCTCAAATATACACCTGAGCATATGCATTGCTTTGCTATGTTTTGGGGACCGCTTGCTCCACCAAAAAGTGGTGTACTGGCAGTCCAGCATCTCTCCAACAGTCAGGTACCATTTAGAATTACTGCAACAGGCTTTGTTCAAGAATTCAACAATACTGCCCGAATCATGAAGAAAATCAAGCTCACAGGTGTACCGTGCAAGATATTTAAGAAAACTGCCCTAGTCAAAGGCATGTTCACATCTGACTTAGAGGTTGCTAGGTTTGAGGGTGCAACTATTCGGACGGTAAGTGGAATCCGAGGGCAAGTTAAAAAGGCAGCAAAGATTGAACCAGGAGATATGCCAAGGAGAAAAGGGGAAAGTATAGACGGGATTGCAAGGTGCACATTTGAAGACAGAATTCTTATGAGTGACATTGTCTTCATGCGTGCATGGGTCAATGTTGAAGTTCCCACCTACTGTAACCTTGTGACAACTGCTCTTCAACCCCAAGATGAGACTTGGCAAGGCATGAGAACTACTGCTGAGCTGCGGAGGGCACATAATATTCCTATACCGCACAACACAGATTCAGTTTATAAGCCCATTGAGCGGAAAGTGCGGAAGTTTAATCCTATAGAGATCCCTGCAAAACTGCAGCATCTACTTCCTTTTAAATCTAAACCGAAGGATACGCCCAAGCATAGAAAAACACCAGTGGAGAACAGGGTCCCTGTCCTTATGCAGCCCAGTGAGAAGAAGACACATGCAGCCATTCAACAGTTAAGGCTGCTAAAACATGAGAAGGCAAGGAAGAAGAAATTGCAGGATGAGAAGAAGAAGAAAGCATATGAGGCGGAGAAAGCAAAGTCTGAACTTCTAACGAAGAAGCGGCAGAGAGAGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGCAAAAGAAGCGAGCCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGAAATCTCCTGAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGCCTCCAGAAAAAAGAGGCTCGGATTGACA GCAGACGAGGTCTGATGCCTCGGCATATCAAGCTGGAGATGCAGAACAACTTGGTATAATCTGGGCCGGATTCAACTAGTAGCGTCTTTTTTATGTAGCTAACC AGTTTTGCTCCACCA TGCTGCTACGAAAATTTTGTCATCCATGTAACTGATGATTTGTAGCTCCCA GGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGACATAACA GTTGCCCATTTTCAGGCCTATTATAATTCTAGAGCTAGGGGACACTGAGTTGTCAGCATTGGATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCCCG ] [+] EMBL BM420060 [ AGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGC AAAGAAGCGAGCCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGAAATCTCCTGAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGCCTCCAGAAAAAAGAGGCTCGGATTGACANGCAGACGAGGTCTGATGCCTCGGCATATCAAGCTGGAGATGCAGAACAACTTGGTATAATCTGCGCCGGATTCAACTAGTAGCGTCTTTTTTATGCAGCTAACCAAGTTTTGCTCCACCACTGCTGCTACGAAAATTTTGTCATCCATGTAACTGATGATTTGTAGCTCCCACGGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGACATAACACGTTGCCCATTTTCAGCCCTATTATAATTCTGGAGCTAGGGGACACTGAGTTGTCACCATTGGATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCCCGTTCTGCTCCCAAAAAAAA] consensusID : consensus_5648#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1378 fasta sequence [TGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACATTGGAGAGCAATGATCATTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATATCCTTTCTTACATTTTTGAATGTTTTTTTTCTTTTGTTTGTTGTCAAATAATTTGCTATCATTTAAAAGGGGAATTGCT] [+] EMBL AK060242 [TGGCTACCTTCGTGGCTGTAACATGAAAAGAGGGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGGCAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGCTGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATATAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAAAGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGATATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTGCTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAGAAGCAGATGGTAATAACATATGCAACGCAAACACATTGGAGAGCAATGATCATTCTTATTCTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATGAAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTATCAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTGAAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTGATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACACTGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGGATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAGGACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATTACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCATTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAAATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTGAGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAGATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATGCAGAATATCCTTTCTTACATTTTTGAATGTTTTTTTTCTTTTGTTTGTTGTCAAATAATTTGCTATCATTTAAAAGGGGAATTGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_5648#0 CCACCGCCGCTCTCTTCGCCGCAGCGGCGCCGCGCGCAAACGCCCTCCGCCGCTAACCCT 60 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AGCGCTCCATGGCCCCCGCGGACGGCGGGGGAGAGCAGCCGCACAAGGCGCACCGGCAGC 120 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ACAAGTCCGGCGCGAAGGCGAGGAAGAAGAAGGGGAAGGGGAAGGGCGGCGGCGGCGACG 180 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ATGACGGTGGCGAGAGGAAGAACCCGAAGGCTTTTGCCTTTCAGTCAGCTGCAAAGGCCA 240 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AGCGTCTACAAGCACGATCGGCTGAGATTGAACAACGTCGTCTTCATGTGCCAATTATGG 300 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ATCGCTCAATTGGTGAACCACCACCTTTTGTTGTTGTAGTTCAAGGGCCTCCTCAGGTTG 360 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 GGAAGTCGCTGCTGATAAAATGTCTAGTAAAGCACTACACGAAACAAAATTTGTCTGAAG 420 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 TCCGTGGTCCAATCACTGTTGTGTCAGGTAAAAGCAGGCGCGTACAGTTCTTGGAGTGTC 480 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 CAAATGATATCAACGGAATGATTGATGCTGCTAAAATAGCTGATCTTGCTCTGCTGCTTA 540 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 TTGATGGAAGCTATGGATTTGAAATGGATACATTTGAGTTCCTAAATATTATGCAAGTGC 600 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ACGGATTCCCCAAGGTGATGGGAGTCCTTACACATCTTGATAAGTTTAAAGATGTAAAAA 660 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AGCTTAGGAAAACCAAGCAGCGCCTGAAGCATCGATTTTGGGCTGAGATAAAGGAGGGAG 720 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 CAAAACTTTTCTACTTGTCTGGTCTCATTCATGGAAAGTACACGAAAAGAGAAGTCCATA 780 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ATCTTGCAAGGTTCATCTCTGTTATCAAGCCTATCCCACTGAGTTGGAGGATGGCACATC 840 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 CTTATCTGCTAGTCGATAGATTTGAAGATGTAACTCCTCCAGAAAGTGTGCGCTTGAACA 900 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 GAAAGTGTGACAGGAAAATAACATTGTATGGCTACCTTCGTGGCTGTAACATGAAAAGAG 960 consensus_5648#1 ----------------------------TGGCTACCTTCGTGGCTGTAACATGAAAAGAG 32 ******************************** consensus_5648#0 GGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGG 1020 consensus_5648#1 GGACAAAGGTACATATCACAGGGGCAGGTGATTTTAGCTTGTCTGGGGTAACAAGTTTGG 92 ************************************************************ consensus_5648#0 CAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGC 1080 consensus_5648#1 CAGATCCTTGCCCATTGCCATCAGCTGCAAAGAAGAGAGGACTACGTGACAAGGAAAAGC 152 ************************************************************ consensus_5648#0 TGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATA 1140 consensus_5648#1 TGTTCTACGCGCCAATGTCTGGCCTTGGTGATCTACTGTATGACACAGATGCAGTTTATA 212 ************************************************************ consensus_5648#0 TAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAA 1200 consensus_5648#1 TAAACATCAATCCTCATCTTGTTCAGTTCTCAAAGACTGGTGAGAATGATGCATCTAAAA 272 ************************************************************ consensus_5648#0 AGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGAT 1260 consensus_5648#1 AGCAAGGGAAAGGACAGGATGTTGGTGTAACCCTAGTAAAAACACTTCAGAACCCCAGAT 332 ************************************************************ consensus_5648#0 ATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTG 1320 consensus_5648#1 ATTCCCTTAATGAAAAGTTGGATCAGAGTTTTATAAATTTATTTGGTAGAAAGCCTGCTG 392 ************************************************************ consensus_5648#0 CTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAG 1380 consensus_5648#1 CTCAGTCCGAAGACATCTCTGGCAACCAGAATGATCAGGGAGATGCTAATATTTTGGAAG 452 ************************************************************ consensus_5648#0 AAGCAGATGGTAATAACATATGCAACGCAAACACGTTGGAGAGCAATGATCATTCTTATT 1440 consensus_5648#1 AAGCAGATGGTAATAACATATGCAACGCAAACACATTGGAGAGCAATGATCATTCTTATT 512 ********************************** ************************* consensus_5648#0 CTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATG 1500 consensus_5648#1 CTGAGTGCTCCAGCGATAGTGAACATGATAATGATGAAGCAACTCAGCAAAATGACCATG 572 ************************************************************ consensus_5648#0 AAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTAT 1560 consensus_5648#1 AAGTTGGCTTGAGAGAAGAGGTGGAATTTTGCAATGGAAGGATGAGGAGAAAAGCTGTAT 632 ************************************************************ consensus_5648#0 CAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTG 1620 consensus_5648#1 CAGCTAATTTTAAAGATGATGACGATGATGAGGGTGCGGAAGAAGATGACGTTGACAGTG 692 ************************************************************ consensus_5648#0 AAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTG 1680 consensus_5648#1 AAAATTCTGGTGATGACCAGTTATCTGAAGGTTCCGCAGATGACAGTGAAGAATCACTTG 752 ************************************************************ consensus_5648#0 ATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACAC 1740 consensus_5648#1 ATTCAGATGATGAAACTGAGAACAATTCAAAGTGGAAAGAGTCCTTGCTTGCTAGAACAC 812 ************************************************************ consensus_5648#0 TGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGG 1800 consensus_5648#1 TGTCCAGACGGAGTGCCAATCTAATGCAACTTGTATATGGCCAAGCTTCAAAGAAGCTGG 872 ************************************************************ consensus_5648#0 ATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAG 1860 consensus_5648#1 ATGAAGGAAATGACAGTAGTGCAGAAGAGAGTTCAGATGAAGAATTTTTTGTACCAAAAG 932 ************************************************************ consensus_5648#0 GACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATT 1920 consensus_5648#1 GACAAAAGAAGCAAGCAAAGAATGAATCAACAAGCTTTGATGATATGGATGCTGAGGATT 992 ************************************************************ consensus_5648#0 ACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCA 1980 consensus_5648#1 ACTCCAAGTTTTTTAAAACTGAGCTAAGAGATTGGTCTGACGAAGATCTCATCAAGAGCA 1052 ************************************************************ consensus_5648#0 TTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAA 2040 consensus_5648#1 TTCGTGACCGTTTCGTGACTGGAAATTGGTCAAAAGCAGCTCTAAGAGGACAGGAAATAA 1112 ************************************************************ consensus_5648#0 ATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTG 2100 consensus_5648#1 ATGAAAACGATGTGGATGACGAAGAAGTCGATGGAGATTTTGAAGATCTGGAGACTGGTG 1172 ************************************************************ consensus_5648#0 AGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAG 2160 consensus_5648#1 AGGTGCATACAAGCAAGGCATATGAAAATACTTCAGGAAATGGAGGTACTCACAAGCAAG 1232 ************************************************************ consensus_5648#0 ATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATG 2220 consensus_5648#1 ATGACCTTGCTATGGAAGAAAGAAGACTCAAGAAGCTCGCACTTAAGGCAAAATTTGATG 1292 ************************************************************ consensus_5648#0 CAGAATATGATGGATCTGATCTCTCCGGTGAGGAAGTTGATAATGACACAAAGAAATCGA 2280 consensus_5648#1 CAGAATATCCTTTCTTACATTTTT-------GAATGTTTTTTTTCTTTTGTTTGTTGTCA 1345 ******** * * ** * * * * *** * * * consensus_5648#0 AACGAGAAGAAACTAATGGAGGGGGCTATTTCGATAAGTTAAAGGAGGAAATTGAAATTC 2340 consensus_5648#1 AATAATTTGCTATCATTTAAAAGGGGAATTGCT--------------------------- 1378 ** * * * * * * *** *** * consensus_5648#0 GCAAGCAAATGAATATTTCCGAACTCAATGATTTAGATGAAGATACCAGGGTAGAAATTG 2400 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AAGGGTTTAGGACTGGTTCTTACATCAGATTAGAGGTACATGGTGTGCTGTTTGAGCTAG 2460 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 TTGAATATTTTGATCCTTGCCATCCCATTCTCGTTGGAGGCATTGGCCTTGGTGAGGAGA 2520 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ATACTGGATATATGCAGGCTAGCCTGAAACGACACAGGTGGCACAGGAAAGTACTGAAGA 2580 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 CAAAAGACCCAATTATTGTCTCTATTGGTTGGAGGCGTTTCCAAACAACTCCTGTATATG 2640 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 CAATAGAGGATCGAAATGGTCGGCACCGCATGCTCAAATATACACCTGAGCATATGCATT 2700 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 GCTTTGCTATGTTTTGGGGACCGCTTGCTCCACCAAAAAGTGGTGTACTGGCAGTCCAGC 2760 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ATCTCTCCAACAGTCAGGTACCATTTAGAATTACTGCAACAGGCTTTGTTCAAGAATTCA 2820 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ACAATACTGCCCGAATCATGAAGAAAATCAAGCTCACAGGTGTACCGTGCAAGATATTTA 2880 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AGAAAACTGCCCTAGTCAAAGGCATGTTCACATCTGACTTAGAGGTTGCTAGGTTTGAGG 2940 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 GTGCAACTATTCGGACGGTAAGTGGAATCCGAGGGCAAGTTAAAAAGGCAGCAAAGATTG 3000 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AACCAGGAGATATGCCAAGGAGAAAAGGGGAAAGTATAGACGGGATTGCAAGGTGCACAT 3060 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 TTGAAGACAGAATTCTTATGAGTGACATTGTCTTCATGCGTGCATGGGTCAATGTTGAAG 3120 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 TTCCCACCTACTGTAACCTTGTGACAACTGCTCTTCAACCCCAAGATGAGACTTGGCAAG 3180 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 GCATGAGAACTACTGCTGAGCTGCGGAGGGCACATAATATTCCTATACCGCACAACACAG 3240 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ATTCAGTTTATAAGCCCATTGAGCGGAAAGTGCGGAAGTTTAATCCTATAGAGATCCCTG 3300 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 CAAAACTGCAGCATCTACTTCCTTTTAAATCTAAACCGAAGGATACGCCCAAGCATAGAA 3360 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AAACACCAGTGGAGAACAGGGTCCCTGTCCTTATGCAGCCCAGTGAGAAGAAGACACATG 3420 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 CAGCCATTCAACAGTTAAGGCTGCTAAAACATGAGAAGGCAAGGAAGAAGAAATTGCAGG 3480 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ATGAGAAGAAGAAGAAAGCATATGAGGCGGAGAAAGCAAAGTCTGAACTTCTAACGAAGA 3540 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AGCGGCAGAGAGAGGAGAGGCGTGTGAGGTACCGAGAGGAAGATAAGCAAAAGAAGCGAG 3600 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 CCCGCAGATAACTGAAAATAGTAAGAGACCTGCAGGCATAATGAGTCCCAGAAATCTCCT 3660 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 GAGGCACATCATCCAGAGCATATGGTTGCTTCAAACTAGCTCAAGTTGCCGCCTCCAGAA 3720 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AAAAGAGGCTCGGATTGACAGCAGACGAGGTCTGATGCCTCGGCATATCAAGCTGGAGAT 3780 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 GCAGAACAACTTGGTATAATCTGGGCCGGATTCAACTAGTAGCGTCTTTTTTATGTAGCT 3840 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 AACCAGTTTTGCTCCACCATGCTGCTACGAAAATTTTGTCATCCATGTAACTGATGATTT 3900 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 GTAGCTCCCAGGTGAAGTGGGAGTGAATATGTTAAATTATCAATCTTAGGACATAACAGT 3960 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 TGCCCATTTTCAGGCCTATTATAATTCTAGAGCTAGGGGACACTGAGTTGTCAGCATTGG 4020 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 ATTTATTGGTACTACTGTATGACAAGGACGTGATTTTGATAAATTTGGTTCCCGTTCTGC 4080 consensus_5648#1 ------------------------------------------------------------ consensus_5648#0 TCCCAAAAAAAA 4092 consensus_5648#1 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||