cluster # 5655

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Oryza sativa
cluster # 5655 cluster # 5655 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5655#0 length = 370 sequences # 3

consensusID : consensus_5655#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 370
fasta sequence

                              [GACGGAGGGGGCG-GCGCGCGGCG-GACCTGGAGGCGATGGCGACA-CNACGGGAAGGCTCTCTCCTCCGGCCGCCACCTTCTCTCCGAGATGGGAACACTGCAGCTGGTGACTGAAGCTCATGGTGGCATTAGCGCTAAGCTTAAACACTTGCATTCAATTTGTAGTTTAGCTCCTAGCTGGCTACTTCTATTTATTCTAAAAAAACAACTGAACTGTAACCATTTTNATTACTTTGTGACACTTTCATGTATGCATTTGTGAACGTACAGCATGCATGTNTGTTTTCCCTGTACTTAAACAATGTTTTTTTTACCGGATTTGATCTGAGAGAATGCATATTGTTTCATTGCTTTGCTTGGAAACGTAAAAA]

[+] EMBL AU166257             [GACGGAGGGGGCG GCGCGCGGCG GACCTGGAGGCGATGGCGACA NNACGGGAAGGCTCTCTCCTCCGGCCGCCACCTTCTCTCCGAGATGGGAACACTGCAGCTGGTGACTGAAGCTCATGGTGGCATTAGCGCTAAGCTTAAACACTTGCATTCAATTTGTAGTTTAGCTCCTAGCTGGCTACTTCTATTTATTCTAAAAAAACAACTGAACTGTAACCATTTTNATTACTTTGTGACACTTTCATGTATGCATTTGTGAACGTACAGCATGCATGTNTGTTTTCCCTGTACTTAAACAATGTTTTTTTTACCGGATTTGATCTGAGAGAATGCATATTGTTTCATTGCTTTGCTTGGAAACGTAAAAA]
[+] EMBL OS1321795            [GACGGAGGGGGCG GCGCGCGGCG GACCTGGAGGCGATGGCGACA CNACGGGAAGGCTCTCTCCTCCGGCCGCCACCTTCTCTCCGAGATGGGAACACTGCAGCTGGTGACTGAAGCTCATGGTGGCATTAGCGCTAAGCTTAAACACTTGCATTCAATTTGTAGTTTAGCTCCTAGCTGGCTACTTCTATTTATTCTAAAAAAACAACTGAACTGTAACCATTTTANTTACTTTGTGACACTTTCATGTATGCATTTNTGAACGTACAGCATGCATGTNTGTTTTCCCTGTACTT AACAATGTTTTTTTTACCGGA TTGATCTGNGAGAATG                                    ]
[+] EMBL AU161954             [ ACGGAGGGGGCGNGCGCGCGGCGCGACCTGGAGGCGATGGCGACAGCGACGGGAAGGCTCTCTCCTCCGGCCGCCACCTTCTCTCCGAGATGGGAACACTGCAGCTGGTGACTGAAGCTCATGGTGGCATTAGCGCTAAGCTTAAACACTTGCATTCAATTTGTAGTTTAGCTCCTAGCTGGCTACTTCTATTTATTCTAAAAAAACAACTGAACTGTAACCATTTTGATTACTTTGTGACACTTTCATGTATGCATTTGTGAACGTACAGCATGCATGTGTGTTTTCCCTGTACTTAAACAATGTTTTTTTTACCGGATTTGATCTGAGAGAATGCATATTGTTTCATTGC TTGCTTGGAAACGTAAAAA]




>consensus_5655#0
GACGGAGGGGGCGGCGCGCGGCGGACCTGGAGGCGATGGCGACACNACGGGAAGGCTCTC
TCCTCCGGCCGCCACCTTCTCTCCGAGATGGGAACACTGCAGCTGGTGACTGAAGCTCAT
GGTGGCATTAGCGCTAAGCTTAAACACTTGCATTCAATTTGTAGTTTAGCTCCTAGCTGG
CTACTTCTATTTATTCTAAAAAAACAACTGAACTGTAACCATTTTNATTACTTTGTGACA
CTTTCATGTATGCATTTGTGAACGTACAGCATGCATGTNTGTTTTCCCTGTACTTAAACA
ATGTTTTTTTTACCGGATTTGATCTGAGAGAATGCATATTGTTTCATTGCTTTGCTTGGA
AACGTAAAAA

clustalw multiple alignements is not computed in this case