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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5663 cluster # 5663       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5663#0 length = 795 sequences # 3  

consensusID : consensus_5663#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 795
fasta sequence
                              [TCTTTTTTTTTAATGAAAAGTCTGCTATGCAAATTAACAAATCACGATAATGCACATAGACAACAGGTAGAGAATCTAATTCAGGGAAAATATACACAACGGCTAATTAGAGAACAAAAATATGATCAATCAATGGTCGACATGTAAAAGAATTACAGCAGATAACGCTATGACAATGTGAAACTCTGTTCTTCTCGTCATCCTAATTGCGTACCTTCCCTGTGTGACTTACAACAACCCAGTCTCAGCTCTGAATCAAGTTCCTTCCCTGGAGCATCTCATGCTCTCATCAATCAACTTGAATGTCTTCTTTACAAGTTTCTGGTCTAGGGCCGTTGTTCTGTAGATTTTGAACACGTGGTCTACACAGTCAGGCCTGCTGCTCCGGATGTACAGCTCTTCAAATTTCTTAACAATCCTTTTAAACTCTGTATGGGTATAAAGGGCAGCCTTTACCTTTTGTATTTTCTTCTCAA-ATATCATAGACATAAGTGTGTTAATTGTGTGCATGCGAAGCTTTTGTGCACAGAATGTGTTCCCTCTATTCTAGAGCATCAAGCTTGGCCTGCCATCGGTTGCCGATTATTTTTCCTAGTTTCAGTGATGATTTCCTTCGTGTTACCTCAAACGTGTTTCCTTATCCCATTAGCAGCCTATAGTATGTGTGTAGTTGCAGGGCTGTCCCGTCAAATTTGGGGGGCCTGCCGGAAGTGCTTGTTTTGGATCAATAGCTTGACCTCGGAGCATTTCCTCTTGTAGCCAATCTGGAGATGGAGCTCCCTCCATCACTTAATT]

[+] EMBL CB646076             [TCTTTTTTTTTAATGAAAAGTCTGCTATGCAAATTAACAAATCACGATAATGCACATAGACAACAGGTAGAGAATCTAATTCAGGGAAAATATACACAACGGCTAATTAGAGAACAAAAATATGATCAATCAATGGTCGACATGTAAAAGAATTACAGCAGATAACGCTATGACAATGTGAAACTCTGTTCTTCTCGTCATCCTAATTGCGTACCTTCCCTGTGTGACTTACAACAACCCAGTCTCAGCTCTGAATCAAGTTCCTTCCCTGGAGCATCTCATGCTCTCATCAATCAACTTGAATGTCTTCTTTACAAGTTTCTGGTCTAGGGCCGTTGTTCTGTAGATTTTGAACACGTGGTCTACACAGTCAGGCCTGCTGCTCCGGATGTACAGCTCTTCAAATTTCTTAACAATCCTTTTAAACTCTGTATGGGTATAAAGGGCAGCCTTTACCTTTTGTATTTTCTTCTCAA ATATCATAGACATAAGTGTGTTAATTGTGTGCATGCGAAGCTTTTGTGCACAGAATGTGTTCCCTCTATTCTAGAGCATCAAGCTTGGCCTGCCATCGGTTGCCGATTATTTTTCCTAGTTTCAGTGATGATTTCCTTCGTGTTACCTCAAACGTGTTTCCTTATCCCATTAGCAGCCTATAGTATGTGTGTAGTTGCAGGGCTGTCCCGTCAAATTTGGGGGGCCTGCCGGAAGTGCTTGTTTTGGATCAATAGCTTGACCTCGGAGCATTTCCTCTTGTAGCCAATCTGGAGATGGAGCTCCCTCCATCACTTAA  ]
[-] EMBL CB646075             [                    TCTGCTATGCAAATTAACAAATCACGATAATGCACATAGACAACAGGTAGAGAATCTAATTCAGGGAAAATATACACAACGGCTAATTAGAGAACAAAAATATGATCAATCAATGGTCGACATGTAAAAGAATTACAGCAGATAACGCTATGACAATGTGAAACTCTGTTCTTCTCGTCATCCTAATTGCGTACCTTCCCTGTGTGACTTACAACAACCCAGTCTCAGCTCTGAATCAAGTTCCTTCCCTGGAGCATCTCATGCTCTCATCAATCAACTTGAATGTCTTCTTTACAAGTTTCTGGTCTAGGGCCGTTGTTCTGTAGATTTTGAACACGTGGTCTACACAGTCAGGCCTGCTGCTCCGGATGTACAGCTCTTCAAATTTCTTAACAATCCTTTTAAACTCTGTATGGGTATAAAGGGCAGCCTTTACCTTTTGTATTTTCTTCTCAA ATATCATAGACATAAGTGTGTTAATTGTGTGCATGCGAAGCTTTTGTGCACAGAATGTGTTCCCTCTATTCTAGAGCATCAAGCTTGGCCTGCCATCGGTTGCCGATTATTTTTCCTAGTTTCAGTGATGATTTCCTTCGTGTTACCTCAAACGTGTTTCCTTATCCCATTAGCAGCCTATAGTATGTGTGTAGTTGCAGGGCTGTCCCGTCAAATTTGGGGGGCCTGCCGGAAGTGCTTGTTTTGGATCAATAGCTTGACCTCGGAGCATTTCCTCTTGTAGCCAATCTGGAGATGGAGCTCCCTCCATCACTTAATT]
[-] EMBL AU225604             [                                                                                                                                ATCCATGGTCGACATGTTAAAGA  TACAGCAGATAACGCTATGACAATGTGAAACTCTGTTCTTCTCGTCATCATAATTGCGTACCTTCCATGTGTGACTTACAACAACCCAGTCTCAGCTCTGAATCAAGTTCCTTCGCTGGAGCATCTCATGCTCTCATCAATCAACTTGAATGTCTTCTTTACAAGTTTCTGGTCTAGGGCCGTTGTTCTGTAGATTTTGAACACGTGGTCTACACAGTCAGGCCTGCTGCTCCGGATGTACAGCTCTTCAAATTTCTTAACAATCCTTTTAAACTCTGTATGGGTATAAAGGGCAGCCTTTACCTTTTGTATTTTCTTCTCAACATATCATAGACATAAGTGTGTTAATTGTGTGCATGCGAAGCTTTTGTGCACAGAATGTGTTCCCTCTATTCTAGAGCATCAAGCTTGGCCTGCCAGCGGc                                                                                                                                                                                                                           ]


>consensus_5663#0 TCTTTTTTTTTAATGAAAAGTCTGCTATGCAAATTAACAAATCACGATAATGCACATAGA CAACAGGTAGAGAATCTAATTCAGGGAAAATATACACAACGGCTAATTAGAGAACAAAAA TATGATCAATCAATGGTCGACATGTAAAAGAATTACAGCAGATAACGCTATGACAATGTG AAACTCTGTTCTTCTCGTCATCCTAATTGCGTACCTTCCCTGTGTGACTTACAACAACCC AGTCTCAGCTCTGAATCAAGTTCCTTCCCTGGAGCATCTCATGCTCTCATCAATCAACTT GAATGTCTTCTTTACAAGTTTCTGGTCTAGGGCCGTTGTTCTGTAGATTTTGAACACGTG GTCTACACAGTCAGGCCTGCTGCTCCGGATGTACAGCTCTTCAAATTTCTTAACAATCCT TTTAAACTCTGTATGGGTATAAAGGGCAGCCTTTACCTTTTGTATTTTCTTCTCAAATAT CATAGACATAAGTGTGTTAATTGTGTGCATGCGAAGCTTTTGTGCACAGAATGTGTTCCC TCTATTCTAGAGCATCAAGCTTGGCCTGCCATCGGTTGCCGATTATTTTTCCTAGTTTCA GTGATGATTTCCTTCGTGTTACCTCAAACGTGTTTCCTTATCCCATTAGCAGCCTATAGT ATGTGTGTAGTTGCAGGGCTGTCCCGTCAAATTTGGGGGGCCTGCCGGAAGTGCTTGTTT TGGATCAATAGCTTGACCTCGGAGCATTTCCTCTTGTAGCCAATCTGGAGATGGAGCTCC CTCCATCACTTAATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)