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Oryza sativa
cluster # 5664 cluster # 5664       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5664#0 length = 1099 sequences # 3  

consensusID : consensus_5664#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1099
fasta sequence
                              [AGTCTCAACATACTAAGTGTATGCAGTGGAGATATAGCTAGTTATTGGTCACGGTCGAAACTCCGATAGATCGCTCCTGGGTTAATTATCAGGAATTCAAGACTCCATGGAGCTCTTGGCTCTCGTTGTTGTACTACTCGTGCTGGAATCAGGGGTTCTTGCAGTCGACCAACCAGCAGGTTTCCTAAGTATCGACTGCGGCCTGGAGGCAGATGATAGCTACCCAGACGATCTCACCGGCATCACTTACGTCCCAGACGGCCGTTACACCGACGCCGGCGAGAATCACAAGGTGACCACCGTATACCGCGAAGCTTGGTGGGGCCCTGACACACGTACTCTCTACACGGTCAGGAGCTTCCCATCTGCCGAGGGTCAGCGCAACTGCTACTCGCTACCCACCGACGTCCGGTCCAAGTACTTGGTCAGGCTGGAGTTCTTGTATGGCAACTACGACGGCTTGGACAGCTCGTCGCTAAAATTCAACCTTACCCTTGGTGTCAAACACTGGGACACCGTGAGTATAGACACCACCGACGGAAATGATGGTTATAATGTTCACGAAGCGGTGTTCGTGGCATGGGCGAGCTGGGCGCCGGTTTGCCTCATCAACATCGGCCAGGGCACGCCGTTCGTGTCCACGGTGGAGTTGAGGCCTCTCGGTATCTTGCCCTACCCGGCTGTCATGGGCAATGTGTCACTCTCCCTCTATGTTCGGAGCAACGTGGGATCGAGCCCTGATGATGACAAATTAGTAAGGTACCCTGATGATCAGTACGATCGGTTCTGGTTCACAGATGCATACACAGAAGCTGATCCCTCGACGACAAACATTTCCACCCAATCTACCATCCAACCTAGCACTGAATTTGCGGTGCCCTCGCCTGTTCTCCAGAAGGCCGTTGTGCCGAGTGGCAACTCCACAAAACTAGTATTCTTTTCTGACCAATTAGACGCCCTCCTTCATGACCACTTCGTGATTCTGCATTTCGCCGACTTCCAGAACAAGAAGTCCCGGGAATTTACAGTTTCCATAGACAACGGTGTGCAGAGCAGCCCATACAGTACACCATACCTAAAAGTTTTGTCCGTCACCGGC]

[+] EMBL CB632396             [AGTCTCAACATACTAAGTGTATGCAGTGGAGATATAGCTAGTTATTGGTCACGGTCGAAACTCCGATAGATCGCTCCTGGGTTAATTATCAGGAATTCAAGACTCCATGGAGCTCTTGGCTCTCGTTGTTGTACTACTCGTGCTGGAATCAGGGGTTCTTGCAGTCGACCAACCAGCAGGTTTCCTAAGTATCGACTGCGGCCTGGAGGCAGATGATAGCTACCCAGACGATCTCACCGGCATCACTTACGTCCCAGACGGCCGTTACACCGACGCCGGCGAGAATCACAAGGTGACCACCGTATACCGCGAAGCTTGGTGGGGCCCTGACACACGTACTCTCTACACGGTCAGGAGCTTCCCATCTGCCGAGGGTCAGCGCAACTGCTACTCGCTACCCACCGACGTCCGGTCCAAGTACTTGGTCAGGCTGGAGTTCTTGTATGGCAACTACGACGGCTTGGACAGCTCGTCGCTAAAATTCAACCTTACCCTTGGTGTCAAACACTGGGACACCGTGAGTATAGACACCACCGACGGAAATGATGGTTATAATGTTCACGAAGCGGTGTTCGTGGCATGGGCGAGCTGGGCGCCGGTTTGCCTCATCAACATCGGCCAGGGCACGCCGTTCGTGTCCACGGTGGAGTTGAGGCCTCTCGGTATCTTGCCCTACCCGGCTGTCATGGGCAATGTGTCACTCTCCCTCTATGTTCGGAGCAACGTGGGATCGAGCCCTGATGATGANCAATTAGTAAGGTACCCTGATGATCAGTACGATCGGTTCTGGTTCACAGAT                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB630748             [     CAACATACTAAGTGTATGCAGTGGAGATATAGCTAGTTATTGGTCACGGTCGAAACTCCGATAGATCGCTCCTGGGTTAATTATCAGGAATTCAAGACTCCATGGAGCTCTTGGCTCTCGTTGTTGTACTACTCGTGCTGGAATCAGGGGTTCTTGCAGTCGACCAACCAGCAGGTTTCCTAAGTATCGACTGCGGCCTGGAGGCAGATGATAGCTACCCAGACGATCTCACCGGCATCACTTACGTCCCAGACGGCCGTTACACCGACGCCGGCGAGAATCACAAGGTGACCACCGTATACCGCGAAGCTTGGTGGGGCCCTGACACACGTACTCTCTACACGGTCAGGAGCTTCCCATCTGCCGAGGGTCAGCGCAACTGCTACTCGCTACCCACCGACGTCCGGTCCAAGTACTTGGTCAGGCTGGAGTTCTTGTATGGCAACTACGACGGCTTGGACAGCTCGTCGCTAAAATTCAACCTTACCCTTGGTGTCAAACACTGGGACACCGTGAGTATAGACACCACCGACGGAAATGATGGTTATAATGTTCACGAAGCGGTGTTCGTGGCATGGGCGAGCTGGGCGCCGGTTTGCCTCATCAACATCGGCCAGGGCACGCCGTTCGTGTCCACGGTGGAGTTGAGGCCTCTCGGTATCTTGCCCTACCCGGCTGTCATGGGCAATGTGTCACTCTCCCTCTATGTTCGGAGCAACGTGGGATCGAGCCCTGATGATGACAAATTAGTAAGGTACCCTGATGATCAGTACGATCGGTTCTGGTTCACAGATGCATACACAGAAGCTGATCCCTCGACGACAAACATTTCCACCCAATCT                                                                                                                                                                                                                                                            ]
[+] EMBL CB632958             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGCACGCCGTTCGTGTCCACGGTGGAGTTGAGGCCTCTCGGTATCTTGCCCTACCCGGCTGTCATGGGCAATGTGTCACTCTCCCTCTATGTTCGGAGCAACGTGGGATCGAGCCCTGATGATGACAAATTAGTAAGGTACCCTGATGATCAGTACGATCGGTTCTGGTTCACAGATGCATACACAGAAGCTGATCCCTCGACGACAAACATTTCCACCCAATCTACCATCCAACCTAGCACTGAATTTGCGGTGCCCTCGCCTGTTCTCCAGAAGGCCGTTGTGCCGAGTGGCAACTCCACAAAACTAGTATTCTTTTCTGACCAATTAGACGCCCTCCTTCATGACCACTTCGTGATTCTGCATTTCGCCGACTTCCAGAACAAGAAGTCCCGGGAATTTACAGTTTCCATAGACAACGGTGTGCAGAGCAGCCCATACAGTACACCATACCTAAAAGTTTTGTCCGTCACCGGC]


>consensus_5664#0 AGTCTCAACATACTAAGTGTATGCAGTGGAGATATAGCTAGTTATTGGTCACGGTCGAAA CTCCGATAGATCGCTCCTGGGTTAATTATCAGGAATTCAAGACTCCATGGAGCTCTTGGC TCTCGTTGTTGTACTACTCGTGCTGGAATCAGGGGTTCTTGCAGTCGACCAACCAGCAGG TTTCCTAAGTATCGACTGCGGCCTGGAGGCAGATGATAGCTACCCAGACGATCTCACCGG CATCACTTACGTCCCAGACGGCCGTTACACCGACGCCGGCGAGAATCACAAGGTGACCAC CGTATACCGCGAAGCTTGGTGGGGCCCTGACACACGTACTCTCTACACGGTCAGGAGCTT CCCATCTGCCGAGGGTCAGCGCAACTGCTACTCGCTACCCACCGACGTCCGGTCCAAGTA CTTGGTCAGGCTGGAGTTCTTGTATGGCAACTACGACGGCTTGGACAGCTCGTCGCTAAA ATTCAACCTTACCCTTGGTGTCAAACACTGGGACACCGTGAGTATAGACACCACCGACGG AAATGATGGTTATAATGTTCACGAAGCGGTGTTCGTGGCATGGGCGAGCTGGGCGCCGGT TTGCCTCATCAACATCGGCCAGGGCACGCCGTTCGTGTCCACGGTGGAGTTGAGGCCTCT CGGTATCTTGCCCTACCCGGCTGTCATGGGCAATGTGTCACTCTCCCTCTATGTTCGGAG CAACGTGGGATCGAGCCCTGATGATGACAAATTAGTAAGGTACCCTGATGATCAGTACGA TCGGTTCTGGTTCACAGATGCATACACAGAAGCTGATCCCTCGACGACAAACATTTCCAC CCAATCTACCATCCAACCTAGCACTGAATTTGCGGTGCCCTCGCCTGTTCTCCAGAAGGC CGTTGTGCCGAGTGGCAACTCCACAAAACTAGTATTCTTTTCTGACCAATTAGACGCCCT CCTTCATGACCACTTCGTGATTCTGCATTTCGCCGACTTCCAGAACAAGAAGTCCCGGGA ATTTACAGTTTCCATAGACAACGGTGTGCAGAGCAGCCCATACAGTACACCATACCTAAA AGTTTTGTCCGTCACCGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)