cluster # 5707

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Oryza sativa
cluster # 5707 cluster # 5707 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5707#0 length = 1259 sequences # 3
consensusID : consensus_5707#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1259
fasta sequence
                              [TACTTCCTCTCCTTCCTTCTCTTCTTGCCAAGCTCAAGCTGATCAAGCCAAGAAGCTAGCTAGCTATGTCGTCTTCGCCGCCGACGAGCGCGATGGCGGCGGGAACGTCGTCGTCGTCGGGAGGCGGATCTGGGCCGTTGGTGGTGAGCAACGGCGTGCTGCTCGCCGCGGTCATCTTCCTGTTCATGGTCGTCGTCTTCGTCTTCCTCCTCTACCTCTACGCCAAGAGATACCTCGGCGCGAACCCGCTGCTCGCCCCCGTCTCGCCCTCCTCCCGCTTCCTCTTCCTCGACGCCTCCCCGTTCCCGCGCCGCGGGTTGCCGGCGGCCGCGCTGCGGGCGCTGCCCGTCACGGTCTACGCGAAGCCCGCGGCGGCGCGCGGCGAGGAGGCGCTCGAGTGCGCGGTGTGCTTGTCCGAGGTGGCCGACGGCGAGAAGGTGCGGATGCTGCCCAAGTGCGACCATGGATTCCACGTCGAGTGCATCGACATGTGGTTCCATTCCCACGACACCTGCCCGCTCTGCCGCGCGCCCGTGGGGCCCGACGCCGGCGGCGAGGGGCTGCCGCGCGTGCCGCGGGAGGAGCCGGCTGCCATGGACTTCCCCATGTTCCCCACCAACGTCCTCTTCTGGGGCACCGACCACGACGACGTCGCCAACGCCGGTGACCGCCACCCGTTCCACCCCCCGCCGCCGCCGCCGCCTCTCATGGCCGCGCCCTCCACGAGCTCCTCGGCGTCCGCGCGCAGGAAGGAGAGCCTCGTCATCGACATCCCGTCGCGCTCTGCCGCCGCCGCCGCGGTGGACTCCGTCACGTCGTCCTCCGCCTCGACGCCGCTGCCGGCGAGCAGGATGGCGGACGACATGAGGTCGCCGGTGTCGGCGCGGCTGCGGTCGCTGCGCCGCCTCCTCAGCAGGGGCAAGCAGGCCGTGGTCGGACCGTCCTTCAGCCCGCGCGGCGGCGGCGACATCGAGCAGGGGCTCGCCGGCGCTCCGCCGAAGACGCCCAAGACGCCGCCGCCGGCGAACTGATCCTTCTCCCCGGAGCTCCGAGATGCATTGGCTCGCCTCGCCGATCACCGGAGCGTACACATGTGTTCATTCTTTCTTTCCTACTATTCTTTTCTGATATTTTCTTTTACATTTCAAAAAAGAAAAAAAAAGAAGAAATTTTGATGAGAAACTCTCATGTAAAAAGAAGATGACAACATTACTGTAAGTTGATTCTTGGTGATTGGGGGATAAAATTGATGAATTTGT]

[+] EMBL AK070038             [TACTTCCTCTCCTTCCTTCTCTTCTTGCCAAGCTCAAGCTGATCAAGCCAAGAAGCTAGCTAGCTATGTCGTCTTCGCCGCCGACGAGCGCGATGGCGGCGGGAACGTCGTCGTCGTCGGGAGGCGGATCTGGGCCGTTGGTGGTGAGCAACGGCGTGCTGCTCGCCGCGGTCATCTTCCTGTTCATGGTCGTCGTCTTCGTCTTCCTCCTCTACCTCTACGCCAAGAGATACCTCGGCGCGAACCCGCTGCTCGCCCCCGTCTCGCCCTCCTCCCGCTTCCTCTTCCTCGACGCCTCCCCGTTCCCGCGCCGCGGGTTGCCGGCGGCCGCGCTGCGGGCGCTGCCCGTCACGGTCTACGCGAAGCCCGCGGCGGCGCGCGGCGAGGAGGCGCTCGAGTGCGCGGTGTGCTTGTCCGAGGTGGCCGACGGCGAGAAGGTGCGGATGCTGCCCAAGTGCGACCATGGATTCCACGTCGAGTGCATCGACATGTGGTTCCATTCCCACGACACCTGCCCGCTCTGCCGCGCGCCCGTGGGGCCCGACGCCGGCGGCGAGGGGCTGCCGCGCGTGCCGCGGGAGGAGCCGGCTGCCATGGACTTCCCCATGTTCCCCACCAACGTCCTCTTCTGGGGCACCGCCCACGACGACGTCGCCAACGCCGGTGACCGCCACCCGTTCCACCCCCCGCCGCCGCCGCCGCCTCTCATGGCCGCGCCCTCCACGAGCTCCTCGGCGTCCGCGCGCAGGAAGGAGAGCCTCGTCATCGACATCCCGTCGCGCTCTGCCGCCGCCGCCGCGGCGGACTCCGTCACGTCGTCCTCCGCCTCGACGCCGCTGCCGGCGAGCAGGATGGCGGACGACATGAGGTCGCCGGTGTCGGCGCGGCTGCGGTCGCTGCGCCGCCTCCTCAGCAGGGGCAAGCAGGCCGTGGTCGGACCGTCCTTCAGCCCGCGCGGCGGCGGCGACATCGAGCAGGGGCTCGCCGGCGCTCCGCCGAAGACGCCCAAGACGCCGCCGCCGGCGAACTGATCCTTCTCCCCGGAGCTCCGAGATGCATTGGCTCGCCTCGCCGATCACCGGAGCGTACACATGTGTTCATTCTTTCTTTCCTACTATTCTTTTCTGATATTTTCTTTTACATTTCAAAAAAGAAAAAAAAAGAAGAAATTTTGATGAGAAACTCTCATGTAAAAAGAAGATGACAACATTACTGTAAGTTGATTCTTGGTGATTGGGGGATAAAATTGATGAATTTG ]
[+] EMBL CB628217             [                                                                                                                                                                                                                                                                                                                                                                                                                 GCGGTGTGCTTGTCCGAGGTGGCCGACGGCGAGAAGGTGCGGATGCTGCCCAAGTGCGACCATGGATTCCACGTCGAGTGCATCGACATGTGGTTCCATTCCCACGACACCTGCCCGCTCTGCCGCGCGCCCGTGGGGCCCGACGCCGGCGGCGAGGGGCTGCCGCGCGTGCCGCGGGAGGAGCCGGCTGCCATGGACTTCCCCATGTTCCCCACCAACGTCCTCTTCTGGGGCACCGACCACGACGACGTCGCCAACGCCGGTGACCGCCACCCGTTCCACCCCCCGCCGCCGCCGCCGCCTCTCATGGCCGCGCCCTCCACGAGCTCCTCGGCGTCCGCGCGCAGGAAGGAGAGCCTCGTCATCGACATCCCGTCGCGCTCTGCCGCCGCCGCCGCGGTGGACTCCGTCACGTCGTCCTCCGCCTCGACGCCGCTGCCGGCGAGCAGGATGGCGGACGACATGAGGTCGCCGGTGTCGGCGCGGCTGCGGTCGCTGCGCCGCCTCCTCAGCAGGGGCAAGCAGGCCGTGGTCGGACCGTCCTTCAGCCCGCGCGGCGGCGGCGACATCGAGCAGGGGCTCGCCGGCGCTCCGCCGAAGACGCCCAAGACGCCGCCGCCGGCGAACTGATCCTTCTCCCCGGAGCTCCGAGATGCATTGGCTCGCCTCGCCGATCACCGGAGCGTACACATGTGTTCATTCTTTCTTTCCTACTATT                                                                                                                                            ]
[-] EMBL CB628218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGTGGGGCCCGACGCCGGCGGCGAGGGGCTGCCGCGCGTGCCGCGGGAGGAGCCGGCTGCCATGGACTTCCCCATGTTCCCCACCAACGTCCTCTTCTGGGGCACCGACCACGACGACGTCGCCAACGCCGGTGACCGCCACCCGTTCCACCCCCCGCCGCCGCCGCCGCCTCTCATGGCCGCGCCCTCCACGAGCTCCTCGGCGTCCGCGCGCAGGAAGGAGAGCCTCGTCATCGACATCCCGTCGCGCTCTGCCGCCGCCGCCGCGGTGGACTCCGTCACGTCGTCCTCCGCCTCGACGCCGCTGCCGGCGAGCAGGATGGCGGACGACATGAGGTCGCCGGTGTCGGCGCGGCTGCGGTCGCTGCGCCGCCTCCTCAGCAGGGGCAAGCAGGCCGTGGTCGGACCGTCCTTCAGCCCGCGCGGCGGCGGCGACATCGAGCAGGGGCTCGCCGGCGCTCCGCCGAAGACGCCCAAGACGCCGCCGCCGGCGAACTGATCCTTCTCCCCGGAGCTCCGAGATGCATTGGCTCGCCTCGCCGATCACCGGAGCGTACACATGTGTTCATTCTTTCTTTCCTACTATTCTTTTCTGATATTTTCTTTTACATTTCAAAAAAGAAAAAAAAAGAAGAAATTTTGATAAGAAACTCTCATGTAAAAAGAAGATGACAACATTACTGTAAGTTGATTCTTGGTGATTGGGGGATAAAATTGATGAATTTGT]




>consensus_5707#0
TACTTCCTCTCCTTCCTTCTCTTCTTGCCAAGCTCAAGCTGATCAAGCCAAGAAGCTAGC
TAGCTATGTCGTCTTCGCCGCCGACGAGCGCGATGGCGGCGGGAACGTCGTCGTCGTCGG
GAGGCGGATCTGGGCCGTTGGTGGTGAGCAACGGCGTGCTGCTCGCCGCGGTCATCTTCC
TGTTCATGGTCGTCGTCTTCGTCTTCCTCCTCTACCTCTACGCCAAGAGATACCTCGGCG
CGAACCCGCTGCTCGCCCCCGTCTCGCCCTCCTCCCGCTTCCTCTTCCTCGACGCCTCCC
CGTTCCCGCGCCGCGGGTTGCCGGCGGCCGCGCTGCGGGCGCTGCCCGTCACGGTCTACG
CGAAGCCCGCGGCGGCGCGCGGCGAGGAGGCGCTCGAGTGCGCGGTGTGCTTGTCCGAGG
TGGCCGACGGCGAGAAGGTGCGGATGCTGCCCAAGTGCGACCATGGATTCCACGTCGAGT
GCATCGACATGTGGTTCCATTCCCACGACACCTGCCCGCTCTGCCGCGCGCCCGTGGGGC
CCGACGCCGGCGGCGAGGGGCTGCCGCGCGTGCCGCGGGAGGAGCCGGCTGCCATGGACT
TCCCCATGTTCCCCACCAACGTCCTCTTCTGGGGCACCGACCACGACGACGTCGCCAACG
CCGGTGACCGCCACCCGTTCCACCCCCCGCCGCCGCCGCCGCCTCTCATGGCCGCGCCCT
CCACGAGCTCCTCGGCGTCCGCGCGCAGGAAGGAGAGCCTCGTCATCGACATCCCGTCGC
GCTCTGCCGCCGCCGCCGCGGTGGACTCCGTCACGTCGTCCTCCGCCTCGACGCCGCTGC
CGGCGAGCAGGATGGCGGACGACATGAGGTCGCCGGTGTCGGCGCGGCTGCGGTCGCTGC
GCCGCCTCCTCAGCAGGGGCAAGCAGGCCGTGGTCGGACCGTCCTTCAGCCCGCGCGGCG
GCGGCGACATCGAGCAGGGGCTCGCCGGCGCTCCGCCGAAGACGCCCAAGACGCCGCCGC
CGGCGAACTGATCCTTCTCCCCGGAGCTCCGAGATGCATTGGCTCGCCTCGCCGATCACC
GGAGCGTACACATGTGTTCATTCTTTCTTTCCTACTATTCTTTTCTGATATTTTCTTTTA
CATTTCAAAAAAGAAAAAAAAAGAAGAAATTTTGATGAGAAACTCTCATGTAAAAAGAAG
ATGACAACATTACTGTAAGTTGATTCTTGGTGATTGGGGGATAAAATTGATGAATTTGT
clustalw multiple alignements is not computed in this case