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Oryza sativa
cluster # 5730 cluster # 5730       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5730#0 length = 685 sequences # 3  

consensusID : consensus_5730#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 685
fasta sequence
                              [TCCTTTTGGAGCTGCTGCTGTTTCTCCTCTGCCTATAAAAAGGGCTTCAGCTCTCGATTTCCATTTCTGAATTATCATCGCCTGAAGAGCAATTCAAGAGGAGAGGAGAGGAGAGCTAGCTAAGGCAGCCATGGATTACTGCAAGCAGCAGGAGCGAGACGGGCACCGCGACGATGGCGATGTGACGGAGTGGAAGAAGGTGGCCGAGCTGAGAGCCGTCGTCGAAGCCCAGGACCCTGCATGCAAGGAGGAGGACGACTACCAGCTGCGCCGGTTCCTGCGCGCGAGAGACCACAACATCGGCAAGGCGTCGGCGATGCTGGTGAAGTACCTGCAGTGGAAGCGCGAGGTGAAGCCCGGCGGCCGCGCCATCGCCGACGAGGAGGTGCGCGGCGAGCTGGCGCAGGAGAAGCTCTACATGCAGGGCTACGACCGGCAGGGGCGCCCCCTGGTGTACGGCTTCGGCGCCCGCCACTTCCCGGCGCGCCGCGACCTCGACGAGTTCAAGCGCTACGTCGTCTACGTCCTCGACCGCACCTGCGCCCGCCTCGGCGGCAATGGCGGGCAGGAGAATTCGCCGCCGTGGNCGACCTGCAGGGNTGGGGTNTACNGCAACTGCGACATCCNCNCTTNCTTGCGGCGCTGGANATCTGCAAACTACTACCCCGAAAGCTGGGGGAGGTTC]

[+] EMBL AK062083             [TCCTTTTGGAGCTGCTGCTGTTTCTCCTCTGCCTATAAAAAGGGCTTCAGCTCTCGATTTCCATTTCTGAATTATCATCGCCTGAAGAGCAATTCAAGAGGAGAGGAGAGGAGAGCTAGCTAAGGCAGCCATGGATTACTGCAAGCAGCAGGAGCGAGACGGGCACCGCGACGATGGCGATGTGACGGAGTGGAAGAAGGTGGCCGAGCTGAGAGCCGTCGTCGAAGCCCAGGACCCTGCATGCAAGGAGGAGGACGACTACCAGCTGCGCCGGTTCCTGCGCGCGAGAGACCACAACATCGGCAAGGCGTCGGCGATGCTGGTGAAGTACCTGCAGTGGAAGCGCGAGGTGAAGCCCGGCGGCCGCGCCATCGCCGACGAGGAGGTGCGCGGCGAGCTGGCGCAGGAGAAGCTCTACATGCAGGGCTACGACCGGCAGGGGCGCCCCCTGGTGTACGGCTTCGGCGCCCGCCACTTCCCGGCGCGCCGCGACCTCGACGAGTTCAAGCGCTACGTCGTCTACGTCCTCGACCGCACCTGCGCCCGCCTCGGCGGCAATGGCGGGCAGGGGAA                                                                                                                ]
[+] EMBL AK061542             [                                                                                  TGAAGAGCAATTCAAGAGGAGAGGAGAGGAGAGCTAGCTAAGGCAGCCATGGATTACTGCAAGCAGCAGGAGCGAGACGGGCACCGCGACGATGGCGATGTGACGGAGTGGAAGAAGGTGGCCGAGCTGAGAGCCGTCGTCGAAGCCCAGGACCCTGCATGCAAGGAGGAGGACGACTACCAGCTGCGCCGGTTCCTGCGCGCGAGAGACCACAACATCGGCAAGGCGTCGGCGATGCTGGTGAAGTACCTGCAGTGGAAGCGCGAGGTGAAGCCCGGCGGCCGCGCCATCGCCGACGAGGAGGTGCGCGGCGAGCTGGCGCAGGAGAAGCTCTACATGCAGGGCTACGACCGGCAGGGGCGCCCCCTGGTGTACGGCTTCGGCGCCCGCCACTTCCCGGCGCGCCGCGACCTCGACGAGTTCAAGCGCTACGTCGTCTACGTCCTCGACCGCACCTGCGCCCGCCTCGGCGGCAATGGCGGGCAGGAGAA                                                                                                                ]
[+] EMBL AA752071             [                                                                                     gagGCAATTCAAGAGGAGAGGAGAGGAGAGCTAGCTAAGGCAGCCATGGATTACTGCAAGCAGCAGGAGCGAGACGGGCACCGCGACGATGGCGATGTGACGGAGTGGAAGAAGGTGGCCGAGCTGAGAGCCGTCGTCGAAGCCCAGGACCCTGCATGCAAGGAGGAGGACGACTACCAGCTGCGCCGGTTCCTGCGCGCGAGAGACCACAACATCGGCAAGGCGTCGGCGATGCTGGTGAAGTACCTGCAGTGGAAGCGCGAGGTGAAGCCCGGCGGCCGCGCCATCGCCGACNANGANGTGCGCGGCGAGCTGGCGCANGANAA CTCTACATGCAGGGCTACNACCGGCAGGGGCGCCCCCTGGTGTNCGGCTTCGGCGCCCGCCACTTCCCGGCGCGCCGCGACCTCNACGANTTCAAGCGCTACGTCGTCTACGTCCTCGACCGCACCTGCGCCCGCCTCGGCGGCAATGGCGGGCAGGANAATTCGCCGCCGTGGNCGACCTGCAGGGNTGGGGTNTACNGCAACTGCGACATCCNCNCTTNCTTGCGGCGCTGGANATCTGCAAACTACTACCCCGAAAGCTGGGGGAGGTTC]


>consensus_5730#0 TCCTTTTGGAGCTGCTGCTGTTTCTCCTCTGCCTATAAAAAGGGCTTCAGCTCTCGATTT CCATTTCTGAATTATCATCGCCTGAAGAGCAATTCAAGAGGAGAGGAGAGGAGAGCTAGC TAAGGCAGCCATGGATTACTGCAAGCAGCAGGAGCGAGACGGGCACCGCGACGATGGCGA TGTGACGGAGTGGAAGAAGGTGGCCGAGCTGAGAGCCGTCGTCGAAGCCCAGGACCCTGC ATGCAAGGAGGAGGACGACTACCAGCTGCGCCGGTTCCTGCGCGCGAGAGACCACAACAT CGGCAAGGCGTCGGCGATGCTGGTGAAGTACCTGCAGTGGAAGCGCGAGGTGAAGCCCGG CGGCCGCGCCATCGCCGACGAGGAGGTGCGCGGCGAGCTGGCGCAGGAGAAGCTCTACAT GCAGGGCTACGACCGGCAGGGGCGCCCCCTGGTGTACGGCTTCGGCGCCCGCCACTTCCC GGCGCGCCGCGACCTCGACGAGTTCAAGCGCTACGTCGTCTACGTCCTCGACCGCACCTG CGCCCGCCTCGGCGGCAATGGCGGGCAGGAGAATTCGCCGCCGTGGNCGACCTGCAGGGN TGGGGTNTACNGCAACTGCGACATCCNCNCTTNCTTGCGGCGCTGGANATCTGCAAACTA CTACCCCGAAAGCTGGGGGAGGTTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)