cluster # 574

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Oryza sativa
cluster # 574 cluster # 574 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_574#0 length = 562 sequences # 2

consensusID : consensus_574#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 562
fasta sequence

                              [ATTTCTCCCTCGCTTGCAGTCTTTGCTGCTTGCTCCAGGAATCGAGACCCCATCTGGCGATCTCTCCTCTTCTTCTCCTAGCGCCGGCGCTTCGGTTCGCCTCCTGATTTCGAAGCTTCTTGGGATTTTTCAAGCTGATTTTCGTTTCGAAGGAGCGTTGAGGCGCACCTGGAGGGGAGTGTTTGGTGGCAGCTGCTGAAATGAGTACCAGCAGAGATAAGATGAGAAAGCTCAAGGAGCCGCTGCACAAGAGTGAAAACCGAATATGTGCTGACTGCAGCTCACCTGATCCCAAATGGGCATCAGCTAATATAGGGAGTTTTCATATGCCTAAAATGTTCTGGAA-TCACAGAAGTCT-GGGGACGCATATTTCAAAGGTTCTATC-AGTCACTCTAGATGAGTGGACT-GATGATGAGATTAACTCCATGCTAGAAGTCGGTGGAAACTCTTACGCCAATGCAATCTATGAGGCATTTCTTCCAGGAGGCTATCACAAGCCACATCCCGATTCTAGCCAGGAAGAGAGAGCAGATTTCATCAGGTCAAAGTATGAGTTGCAAGA]

[+] EMBL CF276659             [ATTTCTCCCTCGCTTGCAGTCTTTGCTGCTTGCTCCAGGAATCGAGACCCCATCTGGCGATCTCTCCTCTTCTTCTCCTAGCGCCGGCGCTTCGGTTCGCCTCCTGATTTCGAAGCTTCTTGGGATTTTTCAAGCTGATTTTCGTTTCGAAGGAGCGTTGAGGCGCACCTGGAGGGGAGTGTTTGGTGGCAGCTGCTGAAATGAGTACCAGCAGAGATAAGATGAGAAAGCTCAAGGAGCCGCTGCACAAGAGTGAAAACCGAATATGTGCTGACTGCAGCTCACCTGATCCCAAATGGGCATCAGCTAATATAGGGAGTTTTCATATGCCTAAAATGTTCTGGAA TCACAGAAGTCT GGGGACGCATATTTCAAAGGTTCTATC AGTCACTCTAGATGAGTGGACT GATGATGAGATTAACTCCATGCTAGAAGTCGGTGGAAACTCTTACGCCAATGCAATCTATGAGGCATTTCTTCCAGGAGGCTATCACAAGCCACATCCCGATTCTAGCCAGGAAGAGAGAGCAGATTTCATCAGGTCAAAGTATGAGTTGCAAGA]
[+] EMBL C91790               [                   TCTTTGCTGCTTGCTCCAGGAATCGAGACCCCATCTGGCGATCTCTCCTCTTCTTCTCCTAGCGCCGGCGCTTCGGTTCGCCTCCTGATTTCGAAGCTTCTTGGGATTTTTCAAGCTGATTTTCGTTTCGAAGGAGCGTTGAGGCGCACCTGGAGGGGAGTGTTTGGTGGCAGCTGCTGAAATGAGTNCCAGCAGAGATAAGATGAGAAAGCTCAAGGAGCTGCTGCACAAGAGTTAAAACCGAATATGTGCTGACTGCAGCTCACCTGATCCCAAATGGGCATNAGCTAATATA GGAGTTTTCATATGCCTTAAATGTTCTGGAATTCACAGAAGTCTGGGGGACGCATATTTCAAAGGGTCTATCAAGTCACTCTAGATGAATGGACTGGATGATGAGATTAACTCCATGCTAGAAGTCGGTGGAAA TCTTACGCCAA                                                                                                         ]




>consensus_574#0
ATTTCTCCCTCGCTTGCAGTCTTTGCTGCTTGCTCCAGGAATCGAGACCCCATCTGGCGA
TCTCTCCTCTTCTTCTCCTAGCGCCGGCGCTTCGGTTCGCCTCCTGATTTCGAAGCTTCT
TGGGATTTTTCAAGCTGATTTTCGTTTCGAAGGAGCGTTGAGGCGCACCTGGAGGGGAGT
GTTTGGTGGCAGCTGCTGAAATGAGTACCAGCAGAGATAAGATGAGAAAGCTCAAGGAGC
CGCTGCACAAGAGTGAAAACCGAATATGTGCTGACTGCAGCTCACCTGATCCCAAATGGG
CATCAGCTAATATAGGGAGTTTTCATATGCCTAAAATGTTCTGGAATCACAGAAGTCTGG
GGACGCATATTTCAAAGGTTCTATCAGTCACTCTAGATGAGTGGACTGATGATGAGATTA
ACTCCATGCTAGAAGTCGGTGGAAACTCTTACGCCAATGCAATCTATGAGGCATTTCTTC
CAGGAGGCTATCACAAGCCACATCCCGATTCTAGCCAGGAAGAGAGAGCAGATTTCATCA
GGTCAAAGTATGAGTTGCAAGA

clustalw multiple alignements is not computed in this case