cluster # 5741

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Oryza sativa
cluster # 5741 cluster # 5741 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5741#0 length = 2572 sequences # 3
consensusID : consensus_5741#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2572
fasta sequence
                              [TCATGATGGCATAGAGGAGCTTGTCGCTGGTGGCGTTCATGGCGGCGGTGGCGGCGGCGGCCGCGGCGGCGGGCGATGACCGGAGGCCGTACGTGGTGCGGATGGACGTGTCGGCGATGCCGGCGCCGTTCGCGACGCACGACGGGTGGTACCGGTCGGTGCTCTCGTCGGCGTCGGCGAGGGACGCGGCGGCGGCGCCGGCGGCGGAGCACCTGTACACGTACTCGCACGCCATGAACGGGTTCAGCGCGGTGCTGACGGCGAGGCAGGTGGAGGAGATCCGCCGGGCGGACGGGCACGTCGCCGTGTTCCCGGAGACGTACGCGCGGCTGCACACCACGCGCACGCCGGCGTTCCTCGGGCTCAGCGCCGGCGCCGGCGCGTGGCCGGCGTCCAGGTACGGCGCCGACGTGGTCGTCGGGATCGTGGACACCGGCGTGTGGCCCGAGAGCGCCAGCTTCAGCGACGCCGGCGTGGCGGCGCCGGTGCCGGCGAGGTGGAAGGGCGCGTGCGAGGCCGGCGCGTCGTTCCGGCCGTCCATGTGCAACCGGAAGCTCGTCGGCGCGAGGTCGTTCAGCAAGGGGCTGAGGCAGCGCGGCCTCAACATCTCCGACGACGACTACGACTCGCCGCGGGACTACTACGGCCACGGCTCGCACACGTCGTCGACGGCGGCGGGCGCCGCCGTCCCCGGGGCGAGCTACTTCGGCTACGCCAACGGCACGGCCACGGGCGTCGCGCCCATGGCGAGGGTGGCCATGTACAAGGCCGTGTTCTCCGCCGACACGCTGGAGTCCGCGTCCACCGACGTGCTCGCCGCCATGGACCAGGCCATCGCCGACGGCGTCGACGTCATGTCGCTCTCGCTGGGCTTCCCGGAGTCCCCCTACGACACCAACGTCGTCGCCATCGGCGCCTTCGCCGCCGTGCGGAGGGGCATCCTCGTGACGTGCTCCGCCGGCAACGACGGCTCCGACAGCTACACCGTCCTCAACGGCGCGCCGTGGATCACCACCGTCGGCGCGTCGACCATCGACAGGGCGTTCACCGCCACCGTGACGCTCGGCGCCGGCGCCGGCGGCGCGAGGAGCATCGTCGGCAGGTCGGTGTACCCGGGGCGCGTGCCGGCCGGCGCCGCCGCGCTCTACTACGGCCGCGGCAACCGGACCAAGGAGCGGTGCGAGTCCGGCAGCCTCAGCCGCAAGGACGTCCGCGGCAAGTACGTCTTCTGCAACGCCGGCGAGGGCGGCATCCACGAGCAGATGTACGAGGTGCAGAGCAACGGCGGCCGCGGCGTGATCGCGGCGAGCAACATGAAGGAGATCATGGACCCGTCGGACTACGTCACGCCGGTGGTGCTGGTCACGCCCTCCGACGGCGCCGCCATCCAGAGGTACGCGACGGCGGCGGCGGCGCCCAGGGCGAGCGTGCGGTTCGCCGGGACGGAGCTCGGCGTCAAGCCGGCGCCCGCCGTCGCCTACTTCTCGTCGCGCGGGCCGAGCCCGGTGAGCCCGGCCATCCTCAAGCCGGACGTGGTGGCGCCCGGCGTGGACATCCTCGCGGCGTGGGTGCCCAACAAGGAGGTGATGGAGCTCGACGGCGGGGAGACGAAGCTGTACACCAACTACATGCTCGTCTCCGGCACGTCCATGGCGTCGCCGCACGTCGCCGGCGTGGCGGCGCTGCTCCGGTCGGCGCACCCGGACTGGAGCCCGGCCGCCGTCCGGTCGGCCATGATGACGACGGCCTACGTGAAGGACAACGCCGACGACGCCGACCTCGTCAGCATGCCCGGAGGCTCGCCGGGGACGCCGCTGGACTACGGCAGCGGCCATGTCAGCCCCAACCAGGCCACCGACCCCGGCCTCGTCTACGACATCACCGCCGACGACTACGTCGCCTTCCTCTGCGGCGAGCTCCGCTACACCAGCCGCCAGGTCGCCGCCATCGCCGGACACCGCGCCGGCTGCCCCGCCGGCGCCGGAGCAGCAAGCCACCGCGACCTCAACTATCCGTCGTTCATGGTCATCCTCAACAAAACCAACTCGGCCACACGGACGTTCACTAGGACGCTGACCAACGTCGCCGGCTCGCCGGCGAAGTACGCCGTGTCGGTGACGGCGCCGGCGGGGATGGCGGTGAAGGTGACGCCGGCGACGCTGTCCTTCGCCGGCAAGGGCAGCACGCAGGGGTTCAGTGTGACGGTGCAGGTCAGCCAGGTGAAGAGATCAAGAGATGGTGACAATTACATTGGCAACTATGGGTTCTTGAGCTGGAATGAGGTCGGAGGCCAGCATGTTGTCAGGAGCCCTATAGTGTCAGCATTTGCCCAATGAGAAGAACAGATGTTAGCATAGCAGGATCAAAAATAAGAGCATGGAAATAGAAAATGACACTAAAACAAAGTATACTACATACAACTAATAATCATGATCAGGAATATAAAGAGTACATATAATGGAAAGAGAGAAATAATTCTCACCAGGATACTGATATTGCACGTGTATTTTTGTACTCTCTGCTTCTGAATTCTAGTTTTGTTACTGTTCTTCTCAAAAAAAAAAAAAAAAGG]

[+] EMBL AK105112             [TCATGATGGCATAGAGGAGCTTGTCGCTGGTGGCGTTCATGGCGGCGGTGGCGGCGGCGGCCGCGGCGGCGGGCGATGACCGGAGGCCGTACGTGGTGCGGATGGACGTGTCGGCGATGCCGGCGCCGTTCGCGACGCACGACGGGTGGTACCGGTCGGTGCTCTCGTCGGCGTCGGCGAGGGACGCGGCGGCGGCGCCGGCGGCGGAGCACCTGTACACGTACTCGCACGCCATGAACGGGTTCAGCGCGGTGCTGACGGCGAGGCAGGTGGAGGAGATCCGCCGGGCGGACGGGCACGTCGCCGTGTTCCCGGAGACGTACGCGCGGCTGCACACCACGCGCACGCCGGCGTTCCTCGGGCTCAGCGCCGGCGCCGGCGCGTGGCCGGCGTCCAGGTACGGCGCCGACGTGGTCGTCGGGATCGTGGACACCGGCGTGTGGCCCGAGAGCGCCAGCTTCAGCGACGCCGGCGTGGCGGCGCCGGTGCCGGCGAGGTGGAAGGGCGCGTGCGAGGCCGGCGCGTCGTTCCGGCCGTCCATGTGCAACCGGAAGCTCGTCGGCGCGAGGTCGTTCAGCAAGGGGCTGAGGCAGCGCGGCCTCAACATCTCCGACGACGACTACGACTCGCCGCGGGACTACTACGGCCACGGCTCGCACACGTCGTCGACGGCGGCGGGCGCCGCCGTCCCCGGGGCGAGCTACTTCGGCTACGCCAACGGCACGGCCACGGGCGTCGCGCCCATGGCGAGGGTGGCCATGTACAAGGCCGTGTTCTCCGCCGACACGCTGGAGTCCGCGTCCACCGACGTGCTCGCCGCCATGGACCAGGCCATCGCCGACGGCGTCGACGTCATGTCGCTCTCGCTGGGCTTCCCGGAGTCCCCCTACGACACCAACGTCGTCGCCATCGGCGCCTTCGCCGCCGTGCGGAGGGGCATCCTCGTGACGTGCTCCGCCGGCAACGACGGCTCCGACAGCTACACCGTCCTCAACGGCGCGCCGTGGATCACCACCGTCGGCGCGTCGACCATCGACAGGGCGTTCACCGCCACCGTGACGCTCGGCGCCGGCGCCGGCGGCGCGAGGAGCATCGTCGGCAGGTCGGTGTACCCGGGGCGCGTGCCGGCCGGCGCCGCCGCGCTCTACTACGGCCGCGGCAACCGGACCAAGGAGCGGTGCGAGTCCGGCAGCCTCAGCCGCAAGGACGTCCGCGGCAAGTACGTCTTCTGCAACGCCGGCGAGGGCGGCATCCACGAGCAGATGTACGAGGTGCAGAGCAACGGCGGCCGCGGCGTGATCGCGGCGAGCAACATGAAGGAGATCATGGACCCGTCGGACTACGTCACGCCGGTGGTGCTGGTCACGCCCTCCGACGGCGCCGCCATCCAGAGGTACGCGACGGCGGCGGCGGCGCCCAGGGCGAGCGTGCGGTTCGCCGGGACGGAGCTCGGCGTCAAGCCGGCGCCCGCCGTCGCCTACTTCTCGTCGCGCGGGCCGAGCCCGGTGAGCCCGGCCATCCTCAAGCCGGACGTGGTGGCGCCCGGCGTGGACATCCTCGCGGCGTGGGTGCCCAACAAGGAGGTGATGGAGCTCGACGGCGGGGAGACGAAGCTGTACACCAACTACATGCTCGTCTCCGGCACGTCCATGGCGTCGCCGCACGTCGCCGGCGTGGCGGCGCTGCTCCGGTCGGCGCACCCGGACTGGAGCCCGGCCGCCGTCCGGTCGGCCATGATGACGACGGCCTACGTGAAGGACAACGCCGACGACGCCGACCTCGTCAGCATGCCCGGAGGCTCGCCGGGGACGCCGCTGGACTACGGCAGCGGCCATGTCAGCCCCAACCAGGCCACCGACCCCGGCCTCGTCTACGACATCACCGCCGACGACTACGTCGCCTTCCTCTGCGGCGAGCTCCGCTACACCAGCCGCCAGGTCGCCGCCATCGCCGGACACCGCGCCGGCTGCCCCGCCGGCGCCGGAGCAGCAAGCCACCGCGACCTCAACTATCCGTCGTTCATGGTCATCCTCAACAAAACCAACTCGGCCACACGGACGTTCACTAGGACGCTGACCAACGTCGCCGGCTCGCCGGCGAAGTACGCCGTGTCGGTGACGGCGCCGGCGGGGATGGCGGTGAAGGTGACGCCGGCGACGCTGTCCTTCGCCGGCAAGGGCAGCACGCAGGGGTTCAGTGTGACGGTGCAGGTCAGCCAGGTGAAGAGATCAAGAGATGGTGACAATTACATTGGCAACTATGGGTTCTTGAGCTGGAATGAGGTCGGAGGCCAGCATGTTGTCAGGAGCCCTATAGTGTCAGCATTTGCCCAATGAGAAGAACAGATGTTAGCATAGCAGGATCAAAAATAAGAGCATGGAAATAGAAAATGACACTAAAACAAAGTATACTACATACAACTAATAATCATGATCAGGAATATAAAGAGTACATATAATGGAAAGAGAGAAATAATTCTCACCAGGATACTGATATTGCACGTGTATTTTTGTACTCTCTGCTTCTGAATTCTAGTTTTGTTACTGTTCTTC                    ]
[+] EMBL CB654153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGCCGCCTGGACGTCCGCGGCAAGTACGTCTTCTGCAACGCCGGCGAGGGCGGCATCCACGAGCAGATGTACGAGGTGCAGAGCAACGGCGGCCGCGGCGTGATCGCGGCGAGCAACATGAAGGAGATCATGGACCCGTCGGACTACGTCACGCCGGTGGTGCTGGTCACGCCCTCCGACGGCGCCGCCATCCAGAGGTACGCGACGGCGGCGGCGGCGCCCAGGGCGAGCGTGCGGTTCGCCGGGACGGAGCTCGGCGTCAAGCCGGCGCCCGCCGTCGCCTACTTCTCGTCGCGCGGGCCGAGCCCGGTGAGCCCGGCGATCCTCAAGCCGGACGTGGTGGCGCCCGGCGTGGACATCCTCGCGGCGTGGGTGCCCAACAAGGAGGTGATGGAGCTCGACGGCGGGGAGACGAAGCTGTACACCAACTACATGCTCGTCTCCGGCACGTCCATGGCGTCGCCGCACGTCGCCGGCGTGGCGGCGCTGCTCCGGTCGGCGCACCCGGACTGGAGCCCGGCCGCCGTCCGGTCGGCCATGATGACGACGGCCTACGTGAAGGACAACGCCGACGACGCCGACCTCGTCAGCATGCCCGGAGGCTCGCCGGGGACGCCGCTGGACTACGGCAGCGGCCATGTCAGCCCCAACCAGGCCACCGACCCCGGCCTCGTCTACGACATCACCGCCGACGACTACGTCGCCTTCCTCTGCGGCGAGCTCCGCTACACCAGCCGCCAGGTCGCCGCCATCGCCGGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB654154             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCAGGTCGCCGCCATCGCCGGACACCGCGCCGGCTGCCCCGCCGGCGCCGGAGCAGCAAGCCACCGCGACCTCAACTATCCGTCGTTCATGGTCATCCTCAACAAAACCAACTCGGCCACACGGACGTTCACCAGGACGCTGACCAACGTCGCCGGCTCGCCGGCGAAGTACGCCGTGTCGGTGACGGCGCCGGCGGGGATGGCGGTGAAGGTGACGCCGGCGACGCTGTCCTTCGCCGGCAAGGGCAGCACGCAGGGGTTCAGTGTGACGGTGCAGGTCAGCCAGGTGAAGAGATCAAGAGATGGTGACAATTACATTGGCAACTATGGGTTCTTGAGCTGGAATGAGGTCGGAGGCCAGCATGTTGTCAGGAGCCCTATAGTGTCAGCATTTGCCCAATGAGAAGAACAGATGTTAGCATAGCAGGATCAAAAATAAGAGCATGGAAATAGAAAATGACACTAAAACAAAGTATACTACATACAACTAATAATCATGATCAGGAATATAAAGAGTACATATAATGGAAAGAGAGAAATAATTCTCACCAGGATACTGATATTGCACGTGTATTTTTGTACTCTCTGCTTCTGAATTGTAGTTTTGTTACTGTTCTTCTCAAAAAAAAAAAAAAAAGG]




>consensus_5741#0
TCATGATGGCATAGAGGAGCTTGTCGCTGGTGGCGTTCATGGCGGCGGTGGCGGCGGCGG
CCGCGGCGGCGGGCGATGACCGGAGGCCGTACGTGGTGCGGATGGACGTGTCGGCGATGC
CGGCGCCGTTCGCGACGCACGACGGGTGGTACCGGTCGGTGCTCTCGTCGGCGTCGGCGA
GGGACGCGGCGGCGGCGCCGGCGGCGGAGCACCTGTACACGTACTCGCACGCCATGAACG
GGTTCAGCGCGGTGCTGACGGCGAGGCAGGTGGAGGAGATCCGCCGGGCGGACGGGCACG
TCGCCGTGTTCCCGGAGACGTACGCGCGGCTGCACACCACGCGCACGCCGGCGTTCCTCG
GGCTCAGCGCCGGCGCCGGCGCGTGGCCGGCGTCCAGGTACGGCGCCGACGTGGTCGTCG
GGATCGTGGACACCGGCGTGTGGCCCGAGAGCGCCAGCTTCAGCGACGCCGGCGTGGCGG
CGCCGGTGCCGGCGAGGTGGAAGGGCGCGTGCGAGGCCGGCGCGTCGTTCCGGCCGTCCA
TGTGCAACCGGAAGCTCGTCGGCGCGAGGTCGTTCAGCAAGGGGCTGAGGCAGCGCGGCC
TCAACATCTCCGACGACGACTACGACTCGCCGCGGGACTACTACGGCCACGGCTCGCACA
CGTCGTCGACGGCGGCGGGCGCCGCCGTCCCCGGGGCGAGCTACTTCGGCTACGCCAACG
GCACGGCCACGGGCGTCGCGCCCATGGCGAGGGTGGCCATGTACAAGGCCGTGTTCTCCG
CCGACACGCTGGAGTCCGCGTCCACCGACGTGCTCGCCGCCATGGACCAGGCCATCGCCG
ACGGCGTCGACGTCATGTCGCTCTCGCTGGGCTTCCCGGAGTCCCCCTACGACACCAACG
TCGTCGCCATCGGCGCCTTCGCCGCCGTGCGGAGGGGCATCCTCGTGACGTGCTCCGCCG
GCAACGACGGCTCCGACAGCTACACCGTCCTCAACGGCGCGCCGTGGATCACCACCGTCG
GCGCGTCGACCATCGACAGGGCGTTCACCGCCACCGTGACGCTCGGCGCCGGCGCCGGCG
GCGCGAGGAGCATCGTCGGCAGGTCGGTGTACCCGGGGCGCGTGCCGGCCGGCGCCGCCG
CGCTCTACTACGGCCGCGGCAACCGGACCAAGGAGCGGTGCGAGTCCGGCAGCCTCAGCC
GCAAGGACGTCCGCGGCAAGTACGTCTTCTGCAACGCCGGCGAGGGCGGCATCCACGAGC
AGATGTACGAGGTGCAGAGCAACGGCGGCCGCGGCGTGATCGCGGCGAGCAACATGAAGG
AGATCATGGACCCGTCGGACTACGTCACGCCGGTGGTGCTGGTCACGCCCTCCGACGGCG
CCGCCATCCAGAGGTACGCGACGGCGGCGGCGGCGCCCAGGGCGAGCGTGCGGTTCGCCG
GGACGGAGCTCGGCGTCAAGCCGGCGCCCGCCGTCGCCTACTTCTCGTCGCGCGGGCCGA
GCCCGGTGAGCCCGGCCATCCTCAAGCCGGACGTGGTGGCGCCCGGCGTGGACATCCTCG
CGGCGTGGGTGCCCAACAAGGAGGTGATGGAGCTCGACGGCGGGGAGACGAAGCTGTACA
CCAACTACATGCTCGTCTCCGGCACGTCCATGGCGTCGCCGCACGTCGCCGGCGTGGCGG
CGCTGCTCCGGTCGGCGCACCCGGACTGGAGCCCGGCCGCCGTCCGGTCGGCCATGATGA
CGACGGCCTACGTGAAGGACAACGCCGACGACGCCGACCTCGTCAGCATGCCCGGAGGCT
CGCCGGGGACGCCGCTGGACTACGGCAGCGGCCATGTCAGCCCCAACCAGGCCACCGACC
CCGGCCTCGTCTACGACATCACCGCCGACGACTACGTCGCCTTCCTCTGCGGCGAGCTCC
GCTACACCAGCCGCCAGGTCGCCGCCATCGCCGGACACCGCGCCGGCTGCCCCGCCGGCG
CCGGAGCAGCAAGCCACCGCGACCTCAACTATCCGTCGTTCATGGTCATCCTCAACAAAA
CCAACTCGGCCACACGGACGTTCACTAGGACGCTGACCAACGTCGCCGGCTCGCCGGCGA
AGTACGCCGTGTCGGTGACGGCGCCGGCGGGGATGGCGGTGAAGGTGACGCCGGCGACGC
TGTCCTTCGCCGGCAAGGGCAGCACGCAGGGGTTCAGTGTGACGGTGCAGGTCAGCCAGG
TGAAGAGATCAAGAGATGGTGACAATTACATTGGCAACTATGGGTTCTTGAGCTGGAATG
AGGTCGGAGGCCAGCATGTTGTCAGGAGCCCTATAGTGTCAGCATTTGCCCAATGAGAAG
AACAGATGTTAGCATAGCAGGATCAAAAATAAGAGCATGGAAATAGAAAATGACACTAAA
ACAAAGTATACTACATACAACTAATAATCATGATCAGGAATATAAAGAGTACATATAATG
GAAAGAGAGAAATAATTCTCACCAGGATACTGATATTGCACGTGTATTTTTGTACTCTCT
GCTTCTGAATTCTAGTTTTGTTACTGTTCTTCTCAAAAAAAAAAAAAAAAGG
clustalw multiple alignements is not computed in this case