cluster # 5745

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Oryza sativa
cluster # 5745 cluster # 5745 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5745#0 length = 938 sequences # 3

consensusID : consensus_5745#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 938
fasta sequence

                              [GTGCTCTCAAGAAAAGAGAAATGCTACTCCAGGGGCTAGGAATGCGACAAGAATTTGCTTCTGATGGAGGTAGACGTATTGTTGTGTCTCAGCCTATAATTGAAGGCTTGGATGATGTGGAAGAAGAAGAGGATGGGTTAGCATGCATGGTTTGTAGAGAAGGGTATACTTTGAGGCAGTGGCCGTGGGGACTGTGTTTACACTACTGTTAGCCACTTCAACATCATACACTACCAATGTCATCAGGAGGCTAAAAGAGCTGATGCTGCACTGAAGAATCCTAAAAAGGAATGGGATGGTGCTACCCTGAGAAATAATGAGACACTGTGTAATTGTATCTTTCCCTTGAGGGGGCCATCTGTTCCTCCTGGGCAGTACACACGATGTCTCGACCAGTATTGGGACCAATTGAATTCTCTAGGACGAGCAGATGGAAGTCGCCTTCGCTTGTTAACATATGACATTGTTCTGATGTTGGCCAGGTTTGCAACAGGCGCTTCTTTCAGCACTGACTGCAAAGGTGGGGGTAGGGAGAGCAACTCGCGGTTTCTTCCTTTCATGATCCAAATGGCTTCTCATCTTGTAGATGGAAGTGCCAACCAGCAGCGTCATGTCATGGCCAAGGCTGTTACCTCGTACTTGTCCTCTTCGCCTTCAACTCCAGAATCTCCTGTTCGACTTTCAGCTCTATCTGGAGCTCGTGGTGGTTCAGGTTCCTCGGAGGAGACTGTACAGTTCATG-ATGGTCAATTCTCTGCTGTCTGAGTCCTATGAGAGTTGGCTGCAGCACCGCCCCGCTTTCCTGCAGAGGGGCATCTACCATGCTTACATGCACACAAGCATGGACGATCACCCTCAAGCTTTCTGCCGACAGCTTCTTGCATCGTCAGTGAGTTCATCGCGATTAACGCAGAGGCTCTTGCATGTCGCGTCTGTGTC]

[+] EMBL CB671633             [GTGCTCTCAAGAAAAGAGAAATGCTACTCCAGGGGCTAGGAATGCGACAAGAATTTGCTTCTGATGGAGGTAGACGTATTGTTGTGTCTCAGCCTATAATTGAAGGCTTGGATGATGTGGAAGAAGAAGAGGATGGGTTAGCATGCATGGTTTGTAGAGAAGGGTATACTTTGAGGCAGTGGCCGTGGGGACTGTGTTTACACTACTGTTAGCCACTTCAACATCATACACTACCAATGTCATCAGGAGGCTAAAAGAGCTGATGCTGCACTGAAGAATCCTAAAAAGGAATGGGATGGTGCTACCCTGAGAAATAATGAGACACTGTGTAATTGTATCTTTCCCTTGAGGGGGCCATCTGTTCCTCCTGGGCAGTACACACGATGTCTCGACCAGTATTGGGACCAATTGAATTCTCTAGGACGAGCAGATGGAAGTCGCCTTCGCTTGTTAACATATGACATTGTTCTGATGTTGGCCAGGTTTGCAACAGGCGCTTCTTTCAGCACTGACTGCAAAGGTGGGGGTAGGGAGAGCAACTCGCGGTTTCTTCCTTTCATGATCCAAATGGCTTCTCATCTTGTAGATGGAAGTGCCAACCAGCAGCGTCATGTCATGGCCAAGGCTGTTACCTCGTACTTGTCCTCTTCGCCTTCAACTCCAGAATCTCCTGTTCGACTTTCAGCTCTATCTGGAGCTCGTGGTGGTTCAGGTTCCTCGGAGGAGACTGTACAGTTCATG ATGGTCAATTCTCTGCTGTCTGAGTCCTATGAGAGTTGGCTGCAGCACCGCCCCGCTTTCCTGCAGAGGGGCATCTACCATGCTTACATGCA                                                                                                         ]
[+] EMBL CA756710             [                                                                                                                                                                                                                                                                                                                                                                                                                        TTGAATTCTCTAGGACGAGCAGATGGAAGTCGCCTTCGCTTGTTAACATATGACATTGTTCTGATGTTGGCCACGTTTGCAACAGGCGCTTCTTTCAGCACTGACTGCAAAGGTGGGGGTAGGGAGAGCAACTCGCGGTTTCTTCCTTTCATGATCCAAATGGCTTCTCATCTTGTAGATGGAAGTGCCAACCAGCAGCGTCATGTCATGGCCAAGGCTGTTACCTCGTACTTGTC                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AA750572             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCCTCGGAGGAGACTGTACAGTTCATGAATGGTCAATTCTCTGCTGTCTGAGTCCTATGAGAGTTGGCTGCAGCACCGCCCCGCTTTCCTGCAGAGGGGCATCTACCATGCTTACA GCACACAAGCATGGACGATCACCCTCAAGCTTTCTGCCGACAGCTTCTTGCATCGTCAGTGAGTTCATCGCGATTAACGCAGAGGCTCTTGCATGTCGCGTCTGTGTC]




>consensus_5745#0
GTGCTCTCAAGAAAAGAGAAATGCTACTCCAGGGGCTAGGAATGCGACAAGAATTTGCTT
CTGATGGAGGTAGACGTATTGTTGTGTCTCAGCCTATAATTGAAGGCTTGGATGATGTGG
AAGAAGAAGAGGATGGGTTAGCATGCATGGTTTGTAGAGAAGGGTATACTTTGAGGCAGT
GGCCGTGGGGACTGTGTTTACACTACTGTTAGCCACTTCAACATCATACACTACCAATGT
CATCAGGAGGCTAAAAGAGCTGATGCTGCACTGAAGAATCCTAAAAAGGAATGGGATGGT
GCTACCCTGAGAAATAATGAGACACTGTGTAATTGTATCTTTCCCTTGAGGGGGCCATCT
GTTCCTCCTGGGCAGTACACACGATGTCTCGACCAGTATTGGGACCAATTGAATTCTCTA
GGACGAGCAGATGGAAGTCGCCTTCGCTTGTTAACATATGACATTGTTCTGATGTTGGCC
AGGTTTGCAACAGGCGCTTCTTTCAGCACTGACTGCAAAGGTGGGGGTAGGGAGAGCAAC
TCGCGGTTTCTTCCTTTCATGATCCAAATGGCTTCTCATCTTGTAGATGGAAGTGCCAAC
CAGCAGCGTCATGTCATGGCCAAGGCTGTTACCTCGTACTTGTCCTCTTCGCCTTCAACT
CCAGAATCTCCTGTTCGACTTTCAGCTCTATCTGGAGCTCGTGGTGGTTCAGGTTCCTCG
GAGGAGACTGTACAGTTCATGATGGTCAATTCTCTGCTGTCTGAGTCCTATGAGAGTTGG
CTGCAGCACCGCCCCGCTTTCCTGCAGAGGGGCATCTACCATGCTTACATGCACACAAGC
ATGGACGATCACCCTCAAGCTTTCTGCCGACAGCTTCTTGCATCGTCAGTGAGTTCATCG
CGATTAACGCAGAGGCTCTTGCATGTCGCGTCTGTGTC

clustalw multiple alignements is not computed in this case