Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5752 cluster # 5752       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5752#0 length = 805 sequences # 3  

consensusID : consensus_5752#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 805
fasta sequence
                              [GAGCTATGAAATTATTACTGAATGGATCTGTTCATGATTATACAAATTTTTGTCTTTGCCACCTGGCCTTAATTAATCCCTTACAACCATATATTCCTCACAA-ATAATGATAGTAATATACAACAGGCGTGGGCTATCCATACGTACTGCAACCTAAAATTACACACAGGAAGTAAAACAATACAGCATACCCTGTTCAGAACGGAACTACAAAGCATATCAGATATCACTTCACCGTGGTATACCTAATTAGCGTGGCAAACTAATTGAAGATGATAATTCTTGCTCCAGACTGTAGCAACCAGAACCTGGGATTCCTTCAGATGTTAAATCACCAGCATTTGTATAAATATTCTGTGCATAAGAGTTACTAGTATTTGGGCTTAAAAGGTGCTCGATTTCTCCATCATTTCCTGGGAGCAGTTGGAATTTTCTTAGCCTCTTAGTTTTCAGGAACTGCAGCCTCATCTCTACTTCTTTCATAGTAGGTCTATCTACTCCTTTAACTTTCAAGCATGCCATTGTAAGCGAGGCAATTTCATCGATCTCTTCCTTGTTTGCCTCTTCAACAACCTGAGGATCTATTATTTCCATTAGAGAGCCCTCTTGAAGTCCTTCAATGAAGTAATGAGACAAGCTTTGTTTTGCACCTGCCTCATTAATGAAAATTGGTTTCTTTCTTATTAGAAGTTCCACAAGTATCACTCCAAAACTATATACATCACTTTTTTCAGTTAGTTGTCCAGTATGATAATACTCTGGGTCTAGATAACCGAATGTGCCTTGGACAATAGTCACCACATGA]

[+] EMBL CB629117             [GAGCTATGAAATTATTACTGAATGGATCTGTTCATGATTATACAAATTTTTGTCTTTGCCACCTGGCCTTAATTAATCCCTTACAACCATATATTCCTCACAA ATAATGATAGTAATATACAACAGGCGTGGGCTATCCATACGTACTGCAACCTAAAATTACACACAGGAAGTAAAACAATACAGCATACCCTGTTCAGAACGGAACTACAAAGCATATCAGATATCACTTCACCGTGGTATACCTAATTAGCGTGGCAAACTAATTGAAGATGATAATTCTTGCTCCAGACTGTAGCAACCAGAACCTGGGATTCCTTCAGATGTTAAATCACCAGCATTTGTATAAATATTCTGTGCATAAGAGTTACTAGTATTTGGGCTTAAAAGGTGCTCGATTTCTCCATCATTTCCTGGGAGCAGTTGGAATTTTCTTAGCCTCTTAGTTTTCAGGAACTGCAGCCTCATCTCTACTTCTTTCATAGTAGGTCTATCTACTCCTTTAACTTTCAAGCATGCCATTGTAAGCGAGGCAATTTCATCGATCTCTTCCTTGTTTGCCTCTTCAACAACCTGAGGATCTATTATTTCCATTAGAGAGCCCTCTTGAAGTCCTTCAATGAAGTAATGAGACAAGCTTTGTTTTGCACCTGCCTCATTAATGAAAATTGGTTTCTTTCTTATTAGAAGTTCCACAAGTATCACTCCAAAACTATATACATCACTTTTTTCAGTTAGTTGTCCAGTATGATAATACTCTGGGTCTAGATAACCGAATGTGCCTTGGACAATAGTCACC      ]
[+] EMBL CB629119             [            TATTACTGAATGGATCTGTCTTTAAATATACAAATTTTTGTCTTTGCCACCTGGCCTTAATTAATCCCTTACAACCATATATTCCTCACAACCTAATGATAGTAATATACAACAGGCGTGGGCTATCCATACGTACTGCAACCTAAAATTACACACAGGAAGTAAAACAATACAGCATACCCTGTTCAGAACGGAACTACAAAGCATATCAGATATCACTTCACCGTGGTATACCTAATTAGCGTGGCAAACTAATTGAAGATGATAATTCTTGCTCCAGACTGTAGCAACCAGAACCTGGGATTCCTTCAGATGTTAAATCACCAGCATTTGTATAAATATTCTGTGCATAAGAGTTACTAGTATTTGGGCTTAAAAGGTGCTCGATTTCTCCATCATTTCCTGGGAGCAGTTGGAATTTTCTTAGCCTCTTAGTTTTCAGGAACTGCAGCCTCATCTCTACTTCTTTCATAGTAGGTCTATCTACTCCTTTAACTTTCAAGCATGCCATTGTAAGCGAGGCAATTTCATCGATCTCTTCCTTGTTTGCCTCTTCAACAACCTGAGGATCTATTATTTCCATTAGAGAGCCCTCTTGAAGTCCTTCAATGAAGTAATGAGACAAGCTTTGTTTTGCACCTGCCTCATTAATGAAAATTGGTTTCTTTCTTATTAGAAGTTCCACAAGTATCACTCCAAAACTATATACATCACTTTTTTCAGTTAGTTGTCCAGTATGATAA                                                   ]
[+] EMBL CB633518             [             ATTACTGAATGGATCTGTTCATGATTATACAAATTTTTGTCTTTGCCACCTGGCCTTAATTAATCCCTTACAACCATATATTCCTCACAA ATAATGATAGTAATATACAACAGGCGTGGGCTATCCATACGTACTGCAACCTAAAATTACACACAGGAAGTAAAACAATACAGCATACCCTGTTCAGAACGGAACTACAAAGCATATCAGATATCACTTCACCGTGGTATACCTAATTAGCGTGGCAAACTAATTGAAGATGATAATTCTTGCTCCAGACTGTAGCAACCAGAACCTGGGATTCCTTCAGATGTTAAATCACCAGCATTTGTATAAATATTCTGTGCATAAGAGTTACTAGTATTTGGGCTTAAAAGGTGCTCGATTTCTCCATCATTTCCTGGGAGCAGTTGGAATTTTCTTAGCCTCTTAGTTTTCAGGAACTGCAGCCTCATCTCTACTTCTTTCATAGTAGGTCTATCTACTCCTTTAACTTTCAAGCATGCCATTGTAAGCGAGGCAATTTCATCGATCTCTTCCTTGTTTGCCTCTTCAACAACCTGAGGATCTATTATTTCCATTAGAGAGCCCTCTTGAAGTCCTTCAATGAAGTAATGAGACAAGCTTTGTTTTGCACCTGCCTCATTAATGAAAATTGGTTTCTTTCTTATTAGAAGTTCCACAAGTATCACTCCAAAACTATATACATCACTTTTTTCAGTTAGTTGTCCAGTATGATAATACTCTGGGTCTAGATAACCGAATGTGCCTTGGACAATAGTCACCACATGA]


>consensus_5752#0 GAGCTATGAAATTATTACTGAATGGATCTGTTCATGATTATACAAATTTTTGTCTTTGCC ACCTGGCCTTAATTAATCCCTTACAACCATATATTCCTCACAAATAATGATAGTAATATA CAACAGGCGTGGGCTATCCATACGTACTGCAACCTAAAATTACACACAGGAAGTAAAACA ATACAGCATACCCTGTTCAGAACGGAACTACAAAGCATATCAGATATCACTTCACCGTGG TATACCTAATTAGCGTGGCAAACTAATTGAAGATGATAATTCTTGCTCCAGACTGTAGCA ACCAGAACCTGGGATTCCTTCAGATGTTAAATCACCAGCATTTGTATAAATATTCTGTGC ATAAGAGTTACTAGTATTTGGGCTTAAAAGGTGCTCGATTTCTCCATCATTTCCTGGGAG CAGTTGGAATTTTCTTAGCCTCTTAGTTTTCAGGAACTGCAGCCTCATCTCTACTTCTTT CATAGTAGGTCTATCTACTCCTTTAACTTTCAAGCATGCCATTGTAAGCGAGGCAATTTC ATCGATCTCTTCCTTGTTTGCCTCTTCAACAACCTGAGGATCTATTATTTCCATTAGAGA GCCCTCTTGAAGTCCTTCAATGAAGTAATGAGACAAGCTTTGTTTTGCACCTGCCTCATT AATGAAAATTGGTTTCTTTCTTATTAGAAGTTCCACAAGTATCACTCCAAAACTATATAC ATCACTTTTTTCAGTTAGTTGTCCAGTATGATAATACTCTGGGTCTAGATAACCGAATGT GCCTTGGACAATAGTCACCACATGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)