cluster # 5761

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5761 cluster # 5761 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5761#0 length = 865 sequences # 3

consensusID : consensus_5761#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 865
fasta sequence

                              [CGCCGCCGCCGCCTCCTCCTCCCTCCCCTTGACTCGCGACGACGACGGCGACGCGAGCTCGCCGGAGGGTCGCCGCCTCCCCTTCCCCTTCGCGGTAGCCGCGCGCGGCTTCCTCCTCCCGCGTCGCCGCCTCGCACATTGGGGATCTCCCGTTCCCCGTTCCCCCGCGCACCGCTGGAAGGCTATTTTGCCGCGGCCGCAAACCCTAGCTTCCGCCGCCGTGGTGAGGGGCGGTGGCGGGAAGGGGATCGAGCGGTGCGGAA---GTTATTGGACATTGATTATCTTTGGTGGATGACGTCCTCGCAATAAAGTGGGTCAGTGTTTCGAAAGATTCTGCAAGATGTTCAGAGAGGGTTTAGAAACTATTACCCTAGAAGATTATTACTGATGCCAGTACGTGAACGGAAAAAGAAAAAGGGAAGGTGGCTTGCTTAACCGAAGGGAAGAAATGACCAAAGCTACTCCTGTTAAAGCAAGCAAGAACCTTCAATTGCAGAAACAATCTCCAACTAACTTAAAAGAAACAAATGGCCATGTTTGTAAGAAGGAAGTGGTGAATGGCGAGTGTCCTGTCCGTGACGTGAAATGCATTAGCACTTGGATCTGTAAGAATTTGGCCTGTAAAGCTGTTGTAACATCTGAAGATTCCTTCTGCAAGAGGTGCTCATGTTGTATTTGCCATCAGTTTGATGACAATAAGGATCCTAGTCTATGGTTGGTTTGTGCATCTGAAAATGATGACAAGAACTGCTGTGGGTCTTCTTGCCATATTGAGTGTGCGCTCCAACACAAGAAGGTTGGCTGCTTTAATCTTGGGAATATTATTCAACTTGATGGGAGTTATTCTTGCGCTTCATGTGGAAAG]

[+] EMBL CB636804             [CGCCGCCGCCGCCTCCTCCTCCCTCCCCTTGACTCGCGACGACGACGGCGACGCGAGCTCGCCGGAGGGTCGCCGCCTCCCCTTCCCCTTCGCGGTAGCCGCGCGCGGCTTCCTCCTCCCGCGTCGCCGCCTCGCACATTGGGGATCTCCCGTTCCCCGTTCCCCCGCGCACCGCTGGAAGGCTATTTTGCCGCGGCCGCAAACCCTAGCTTCCGCCGCCGTGGTGAGGGGCGGTGGCGGGAAGGGGATCGAGCGGTGCGGAA   GTTATTGGACATTGATTATCTTTGGTGGATGACGTCCTCGCAATAAAGTGGGTCAGTGTTTCGAAAGATTCTGCAAGATGTTCAGAGAGGGTTTAGAAACTATTACCCTATAAGATTATTACTGATGCCAGTACGTGAACGGAAAAAGAAAAAGGGAAGGTGGCTTGCTTAACCGAAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB629625             [                                                                                     CCCTTCCCTGTAGCCGCGCGCGGCTTCCTCCTCCCGCGTCGCCGCCTCGCACATTGGGGATCTCCCGTTCCCCGTTCCCCCGCGCACCGCTGGAAGGCTATTTTGCCGCGGCCGCAAACCCTAGCTTCCGCCGCCGTGGTGAGGGGCGGTGGCGGGAAGGGGATCGAGCGGTGCGGAAGGTGTTATTGGACATTGATTATCTTTGGTGGATGACGTCCTCGCAATAAAGTGGGTCAGTGTTTCGAAAGATTCTGCAAGATGTTCAGAGAGGGTTTAGAAACTATTACCCTAGAAGATTATTACTGATGCCAGTACGTGAACGGAAAAAGAAAAAGGGAAGGTGGCTTGCTTAACCGAAGGGAAGAAATGACCAAAGCTACTCCTGTTAAAGCAAGCAAGAACCTTCAATTGCAGAAACAATCTCCAACTAACTTAAAAGAAACAAATGGCCATGTTTGTAAGAAGGAAGTGGTGAATGGCGAGTGTCCTGTCCGTGACGTGAAATGCATTAGCACTTGGATCTGTAAGAATTTGGCCTGTAAAGCTGTTGTAACATCTGAAGATTCCTTCTGCAAGAGGTGCTCATGTTGTATTTGCCATCAGTTTGATGACAATAAGGATCCTAGTCTATGGTTGGTTTGTGCATCTGAAAATGATGACAAGAACTGCTGTGGGTCTTCTTGCCATATTGAGTGTGCGCTCCAACACAAGAAGGTTGGCTGCTTTAATCTTGGGAATATTAT                                        ]
[+] EMBL CB630050             [                                                                                                                                                                      GCGCACCGCTGGAAGGCTATTTTGCCGCGGCCGCAAACCCTAGCTTCCGCCGCCGTGGTGAGGGGCGGTGGCGGGAAGGGGATCGAGCGGTGCGGAA   GTTATTGGACATTGATTATCTTTGGTGGATGACGTCCTCGCAATAAAGTGGGTCAGTGTTTCGAAAGATTCTGCAAGATGTTCAGAGAGGGTTTAGAAACTATTACCCTAGAAGATTATTACTGATGCCAGTACGTGAACGGAAAAAGAAAAAGGGAAGGTGGCTTGCTTAACCGAAGGGAAGAAATGACCAAAGCTACTCCTGTTAAAGCAAGCAAGAACCTTCAATTGCAGAAACAATCTCCAACTAACTTAAAAGAAACAAATGGCCATGTTTGTAAGAAGGAAGTGGTGAATGGCGAGTGTCCTGTCCGTGACGTGAAATGCATTAGCACTTGGATCTGTAAGAATTTGGCCTGTAAAGCTGTTGTAACATCTGAAGATTCCTTCTGCAAGAGGTGCTCATGTTGTATTTGCCATCAGTTTGATGACAATAAGGATCCTAGTCTATGGTTGGTTTGTGCATCTGAAAATGATGACAAGAACTGCTGTGGGTCTTCTTGCCATATTGAGTGTGCGCTCCAACACAAGAGGGTTGGCTGCTTTAATCTTGGGAATATTATTCAACTTGATGGGAGTTATTCTTGCGCTTCATGTGGAAAG]




>consensus_5761#0
CGCCGCCGCCGCCTCCTCCTCCCTCCCCTTGACTCGCGACGACGACGGCGACGCGAGCTC
GCCGGAGGGTCGCCGCCTCCCCTTCCCCTTCGCGGTAGCCGCGCGCGGCTTCCTCCTCCC
GCGTCGCCGCCTCGCACATTGGGGATCTCCCGTTCCCCGTTCCCCCGCGCACCGCTGGAA
GGCTATTTTGCCGCGGCCGCAAACCCTAGCTTCCGCCGCCGTGGTGAGGGGCGGTGGCGG
GAAGGGGATCGAGCGGTGCGGAAGTTATTGGACATTGATTATCTTTGGTGGATGACGTCC
TCGCAATAAAGTGGGTCAGTGTTTCGAAAGATTCTGCAAGATGTTCAGAGAGGGTTTAGA
AACTATTACCCTAGAAGATTATTACTGATGCCAGTACGTGAACGGAAAAAGAAAAAGGGA
AGGTGGCTTGCTTAACCGAAGGGAAGAAATGACCAAAGCTACTCCTGTTAAAGCAAGCAA
GAACCTTCAATTGCAGAAACAATCTCCAACTAACTTAAAAGAAACAAATGGCCATGTTTG
TAAGAAGGAAGTGGTGAATGGCGAGTGTCCTGTCCGTGACGTGAAATGCATTAGCACTTG
GATCTGTAAGAATTTGGCCTGTAAAGCTGTTGTAACATCTGAAGATTCCTTCTGCAAGAG
GTGCTCATGTTGTATTTGCCATCAGTTTGATGACAATAAGGATCCTAGTCTATGGTTGGT
TTGTGCATCTGAAAATGATGACAAGAACTGCTGTGGGTCTTCTTGCCATATTGAGTGTGC
GCTCCAACACAAGAAGGTTGGCTGCTTTAATCTTGGGAATATTATTCAACTTGATGGGAG
TTATTCTTGCGCTTCATGTGGAAAG

clustalw multiple alignements is not computed in this case