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Oryza sativa
cluster # 5770 cluster # 5770       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5770#0 length = 1661 sequences # 3  

consensusID : consensus_5770#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1661
fasta sequence
                              [GCATGTGTATTTGTCACTACTTTCCAGGGGTCGTCATTGCCAAATTGCTGGCCTTGTAAGCCAGACTCTTGGATTTGGTCCACATTGGGAGCATGATTTACCAATGCTGCTGCAGGTACCTGAGCATTAGCATTTGGAGCTACTTCATGTGGAACATCCTTGCGCTCACTTAATGGATTTACAGCAGAATTTGCATAGACAAGATCAACACCATAAGCCGATGGAGGCACTCCACCAGGCCCAACCGTAGCTACAACATAACTCGAGTAGGGACCCCCGATGCTCATCATATGTGGCATATGGCTCACATTGGTGTGCTGAACATTGTGCAAATAAGAGCTGGCAATGGAAGGTGATGGTGCTGGTTCAGTTGGAAGGACTACCTTAGGTTCACTGACATCAAAAAAGGTGTTGGTGTTGCTCTGACTAACTTCTCTTGCTCGAGTATCTGGGAACCCCTGAGAGTTTTCTGGTATGGCATTCTGGGGTACACCATTCTCAGGAGGCATCACTGGCTTTCTTTGTTCAGTAGAGGCAGAACTGGCCTCACTAGGGCTCAAGCGGAGCGAATCCATCATCCTGTCCACATTAGCCATATAAGTCGGCACAGCAGCAG-GTGCCACTGAGGGACACATTATCACGGCGCGTCAGTCCATCCTCACGATGCCTTGCATTGCCACTTAGGCTACCCTCACCTGTAAGCTGATTGTTTGGACTATTTTGCTTGACGGGATATTGTGCCATTCCTTGGCCTGAAGGCAATTGCTGCTGCTGCGGTGGCAGCGGCTGCTGCATAATGTGTTGATGAGAGCTTGAGATATCATAATGAGCCGAACCTGGAGAAACTACTCTGTCCTTCTCATTTGGAATCACAGGGATCTGGTTAAATCCATAGGTTGAAGGCAACTGCTGTGGTGGAACTTGCTGCTGCTGATGAACATACACATGCTGATGCAAGCCAGATGGGTCAATGAGCACTGTGTTCGGAATCCCTTCAACCTGCTGCGCATACATCATCTCCCTCTCATGCGGCACGGGATGCATATGGGTGTACCCATAAGCCCCCATCGGAACTGGCACCGCCCTCTCCGGCATCATAATCCTTGCCACGTCTTCTGGCCGCAAGCTCATGTATACCGGCACCGTCTCGGGGCCAGGCCCTCCATGCATATCGCTACCGTAGTCATTCGCCACTGGATCTGAGTGAGCATGACGAAGTGCCTTCAAGCACATATTGCAGTCTTCCAGCCTTCCCCCATTTCCTGGCATCGCCTGATTCAGACCCTGCATGGCCTCCCTATGATCGTTCATGAACACAGGCGGCAACGGTGGTAGCTGCGACAGCGGCTGCCGGTACCTCGCTGCTTCCGGCTGTGGATTCGCCTGCGGTGGAGCCCTCACTTCAGCAGCAATCTCCTGTGGCTTCACAGGGACAGGAGCCGGAGCAGCGGCATTGCTGAACACATCGACAAGCGGTGGCGGCGCCGCCACACCAAACGCCGATCTCGCGGCATCATTCGAGCAAGTAGAGGTGGGGGAGAGCGCGGTCGGAGCACCGCCGCCGCCGCCACCACCCGAAGTCGGCGCCGGCGGAGGCGGCCCGCCATCGGAGTTCTGCGTCGACGAGAGGCTCGCGACGCTGTCCTTGCGCACAATACCGT]

[-] EMBL CF305818             [GCATGTGTATTTGTCACTACTTTCCAGGGGTCGTCATTGCCAAATTGCTGGCCTTGTAAGCCAGACTCTTGGATTTGGTCCACATTGGGAGCATGATTTACCAATGCTGCTGCAGGTACCTGAGCATTAGCATTTGGAGCTACTTCATGTGGAACATCCTTGCGCTCACTTAATGGATTTACAGCAGAATTTGCATAGACAAGATCAACACCATAAGCCGATGGAGGCACTCCACCAGGCCCAACCGTAGCTACAACATAACTCGAGTAGGGACCCCCGATGCTCATCATATGTGGCATATGGCTCACATTGGTGTGCTGAACATTGTGCAAATAAGAGCTGGCAATGGAAGGTGATGGTGCTGGTTCAGTTGGAAGGACTACCTTAGGTTCACTGACATCAAAAAAGGTGTTGGTGTTGCTCTGACTAACTTCTCTTGCTCGAGTATCTGGGAACCCCTGAGAGTTTTCTGGTATGGCATTCTGGGGTACACCATTCTCAGGAGGCATCACTGGCTTTCTTTGTTCAGTAGAGGCAGAACTGGCCTCACTAGGGCTCAAGCGGAGCGAATCCATCATCCTGTCCACATTAGCCATATAAGTCGGCACAGCAGCAG GTGCCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB669900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACCCCTTTTAGTTGTCTGGTATGGCATTCTGGGGTACACCATTCTCTGGAGGCATCACTGGCTTTCTTTGTTCAGTAGAGGCAGAACTGGCCTCACTAGGGCTCAAGCGGAGCGAATCCATCATCCTGACCACATTAGCCATATAATTCGGCACAGCGGCAGAGTGCCACTGAGGGACACATTATCACGGCGCGTCAGTCCATCCTCACGATGCCTTGCATTGCCACTTAGGCTACCCTCACCTGTAAGCTGATTGTTTGGACTATTTTGCTTGACGGGATATTGTGCCATTCCTTGGCCTGAAGGCAATTGCTGCTGCTGCGGTGGCAGCGGCTGCTGCATAATGTGTTGATGAGAGCTTGAGATATCATAATGAGCCGAACCTGGAGAAACTACTCTGTCCTTCTCATTTGGAATCACAGGGATCTGGTTAAATCCATAGGTTGAAGGCAACTGCTGTGGTGGAACTTGCTGCTGCTGATGAACATACACATGCTGATGCAAGCCAGATGGGTCAATGAGCACTGTGTTCGGAATCCCTTCAACCTGCTGCGCATACATCATCTCCCTCTCATGCGGCACGGGATGCATATGGGTGTACCCATAAGCCCCCATCGGAACTGGCACCGCCCTCTCCGGCATCATAATCCTTGCCACGTCTTCTGGCCGCAAGCTCATGTATACCGGCACCGTCTCGGGGCCAGGCCCTCCATGCATATCGCTACCGTAGTCATTCGCCACTGGATCTGAGTGAGCATGACGAAGTGCCTTCAAGCACATATTGCAGTCTTCCAGCCTTCCCCCAT                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB655740             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CATCATCTCCATGTCATGCGGCACGGGATGCATATGGGTGTACCCATAAGCCCCCATCGGAACTGGCACCGCCCTCTCCGGCATCATAATCCTTGCCACGTCTTCTGGCCGCAGGCTCATGTATACCGGCACCGTCTCGGGGCCAGGCCCTCCATGCATATCGCTACCGTAGTCATTCACCACTGGATCTGAGTGAGCATGAGGAAGTGCCTTCAAGCACATATTGCAGTCTTCCAGCCTTCCCCCATTTCCTGGCATCGCCTGATTCAGACCCTGCATGGCCTCCCTATGATCGTTCATGAACACAGGCGGCAACGGTGGTAGCTGCGACAGCGGCTGCCGGTACCTCGCTGCTTCCGGCTGTGGATTCGCCTGCGGTGGAGCCCTCACTTCAGCAGCAATCTCCTGTGGCTTCACAGGGACAGGAGCCGGAGCAGCGGCATTGCTGAACACATCGACAAGCGGTGGCGGCGCCGCCACACCAAACGCCGATCTCGCGGCATCATTCGAGCAAGTAGAGGTGGGGGAGAGCGCGGTCGGAGCACCGCCGCCGCCGCCACCACCCGAAGTCGGCGCCGGCGGAGGCGGCCCGCCATCGGAGTTCTGCGTCGACGAGAGGCTCGCGACGCTGTCCTTGCGCACAATACCGT]


>consensus_5770#0 GCATGTGTATTTGTCACTACTTTCCAGGGGTCGTCATTGCCAAATTGCTGGCCTTGTAAG CCAGACTCTTGGATTTGGTCCACATTGGGAGCATGATTTACCAATGCTGCTGCAGGTACC TGAGCATTAGCATTTGGAGCTACTTCATGTGGAACATCCTTGCGCTCACTTAATGGATTT ACAGCAGAATTTGCATAGACAAGATCAACACCATAAGCCGATGGAGGCACTCCACCAGGC CCAACCGTAGCTACAACATAACTCGAGTAGGGACCCCCGATGCTCATCATATGTGGCATA TGGCTCACATTGGTGTGCTGAACATTGTGCAAATAAGAGCTGGCAATGGAAGGTGATGGT GCTGGTTCAGTTGGAAGGACTACCTTAGGTTCACTGACATCAAAAAAGGTGTTGGTGTTG CTCTGACTAACTTCTCTTGCTCGAGTATCTGGGAACCCCTGAGAGTTTTCTGGTATGGCA TTCTGGGGTACACCATTCTCAGGAGGCATCACTGGCTTTCTTTGTTCAGTAGAGGCAGAA CTGGCCTCACTAGGGCTCAAGCGGAGCGAATCCATCATCCTGTCCACATTAGCCATATAA GTCGGCACAGCAGCAGGTGCCACTGAGGGACACATTATCACGGCGCGTCAGTCCATCCTC ACGATGCCTTGCATTGCCACTTAGGCTACCCTCACCTGTAAGCTGATTGTTTGGACTATT TTGCTTGACGGGATATTGTGCCATTCCTTGGCCTGAAGGCAATTGCTGCTGCTGCGGTGG CAGCGGCTGCTGCATAATGTGTTGATGAGAGCTTGAGATATCATAATGAGCCGAACCTGG AGAAACTACTCTGTCCTTCTCATTTGGAATCACAGGGATCTGGTTAAATCCATAGGTTGA AGGCAACTGCTGTGGTGGAACTTGCTGCTGCTGATGAACATACACATGCTGATGCAAGCC AGATGGGTCAATGAGCACTGTGTTCGGAATCCCTTCAACCTGCTGCGCATACATCATCTC CCTCTCATGCGGCACGGGATGCATATGGGTGTACCCATAAGCCCCCATCGGAACTGGCAC CGCCCTCTCCGGCATCATAATCCTTGCCACGTCTTCTGGCCGCAAGCTCATGTATACCGG CACCGTCTCGGGGCCAGGCCCTCCATGCATATCGCTACCGTAGTCATTCGCCACTGGATC TGAGTGAGCATGACGAAGTGCCTTCAAGCACATATTGCAGTCTTCCAGCCTTCCCCCATT TCCTGGCATCGCCTGATTCAGACCCTGCATGGCCTCCCTATGATCGTTCATGAACACAGG CGGCAACGGTGGTAGCTGCGACAGCGGCTGCCGGTACCTCGCTGCTTCCGGCTGTGGATT CGCCTGCGGTGGAGCCCTCACTTCAGCAGCAATCTCCTGTGGCTTCACAGGGACAGGAGC CGGAGCAGCGGCATTGCTGAACACATCGACAAGCGGTGGCGGCGCCGCCACACCAAACGC CGATCTCGCGGCATCATTCGAGCAAGTAGAGGTGGGGGAGAGCGCGGTCGGAGCACCGCC GCCGCCGCCACCACCCGAAGTCGGCGCCGGCGGAGGCGGCCCGCCATCGGAGTTCTGCGT CGACGAGAGGCTCGCGACGCTGTCCTTGCGCACAATACCGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)